BAC Information

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BAC

Clone NameB6Ng01-192L13
Chromosome14 (Build37)
Map Location 99,895,887 - 99,992,720
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC635593, LOC619716, LOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671
Downstream geneLOC668672, EG546623, Klf12, LOC100043413, EG668683, EG668684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192L13.bB6Ng01-192L13.g
ACCGA015886GA015887
length1,002646
definitionB6Ng01-192L13.b B6Ng01-192L13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,991,712 - 99,992,720)(99,895,887 - 99,896,532)
sequence
gaattctgtaaaggaaaaaaaaaaaatgcagtttgggtcctattgccttt
tgaggcaacagaacccttctgaacttggaggcacagcagatgtagctatc
ctgtccgaaggtgagccagtaccctgcgggcttcctgaaacgcagttcac
actcctaaaccactattgctatcaattctgcctttgcttttgtttgtctt
tcttaaacatcccgggtttctcttcctattcattactagcaagggtttct
tcatctcctattctcttgaagccttgtctttctgaaatgtcacacgtgac
gacagtatttattttggcttggcaaccgtttcccttcacggtgtcctgtc
caacattttgttcagttggtcaatttgctaactcaggatgtttggagatg
ggatgtttacatattggacatattgcctgtttacatgcagtcatgtcatg
ttctcatcgggtggcttaagagtttattattctccgggtcacttctttaa
ccgtctgaaatgtgctctctggctagtcacacgggttgattggcatcaaa
acattctaaggtgttgtgtcctgctgcctttttttttttcttaatttctt
cacattccacctaatcaggaaataccagtttttctgctgcctcatgggat
agctcatcgttaaaagcaggctttctcgtcaactcaggttgccttgagtt
tgtcattgctctgttaatgcatttcaaaattctgtgatgagacgccaatg
ctttgcccaccactacaatcgtgttttccaggtgccatgcctttgtgtac
ctcgcagtaccagacatgaggctggatgttcttttgtgaccctaaagatg
gcctaagactttgcttcttcctagaacttccttcatgttctgttataggt
ttttttgtttcacatttcccaacttggaggtcatttcaaattgtatttct
tcaagccaatggatttcccagtttaagtgacatggctttatttatttatg
tg

gaattctgttgatgcacaaacccagaatagtttttatgaggtctagaact
tactcagtttgagtgactccttaaggtaatcaaatttaaaatatgaaatt
agctacaaagtgataattttttgtgaaaaggaaaacatttttaaattcgt
cacatttccaaaaatataaaatttaaaatagataacctctctactaactg
tctaattctatagctttcttctatatttttttgcttcacatttttttcct
ctcttactctagcatattttatgtaggattatttttagaaagactaggaa
gataacctgttcttcctgataagatggttcatcaaagtctggctttcttg
tgcagatgctgttgggctacataaaactcatagcgttactactatgtcca
tacaaaatccatatgctaagccctaataagtgatgggagactctcaggag
actcggctttggaatggggattggctaatgaagatggagcccttagggat
gaagtctgtggctgtgtattggaggcctcagagagaaactaaccatacac
gtgccaagagttgccctcaccagacactgaatctgtccttatcatgtgtg
tgtatctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99991712_99992720
seq2: B6Ng01-192L13.b_47_1048 (reverse)

seq1  CACATAAATAAATAAAGCCATGTCACTTTAAACTGGGAAATTCCATTGGC  50
      |||||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  CACATAAATAAATAAAGCCATGTCAC-TTAAACTGGGAAA-TCCATTGGC  48

seq1  TTTGAAGAAATACAATTTGAAATGACCTCCAAGTTGGGAAATGTGAAAAC  100
       |||||||||||||||||||||||||||||||||||||||||||||||  
seq2  -TTGAAGAAATACAATTTGAAATGACCTCCAAGTTGGGAAATGTGAAA--  95

seq1  AAAAAAAACCTAATAACAGAAACATGAAGGAAGTTCTAGGAAGAAGCAAA  150
       |||||||||| ||||||| ||||||||||||||||||||||||||||||
seq2  CAAAAAAACCT-ATAACAG-AACATGAAGGAAGTTCTAGGAAGAAGCAAA  143

seq1  GTCTTAGGCCATCTTTAGGGTCACAAAAGAACATCCAGCCTCATGTCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGGCCATCTTTAGGGTCACAAAAGAACATCCAGCCTCATGTCTGG  193

seq1  TACTGCGAGGTACACAAAGGCATGGCACCTGGAAAACACGATTGTAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCGAGGTACACAAAGGCATGGCACCTGGAAAACACGATTGTAGTGG  243

seq1  TGGGCAAAGCATTGGCGTCTCATCACAGAATTTTGAAATGCATTAACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAAAGCATTGGCGTCTCATCACAGAATTTTGAAATGCATTAACAGA  293

seq1  GCAATGACAAACTCAAGGCAACCTGAGTTGACGAGAAAGCCTGCTTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGACAAACTCAAGGCAACCTGAGTTGACGAGAAAGCCTGCTTTTAA  343

seq1  CGATGAGCTATCCCATGAGGCAGCAGAAAAACTGGTATTTCCTGATTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGAGCTATCCCATGAGGCAGCAGAAAAACTGGTATTTCCTGATTAGG  393

seq1  TGGAATGTGAAGAAATTAAGAAAAAAAAAAAGGCAGCAGGACACAACACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGTGAAGAAATTAAGAAAAAAAAAAAGGCAGCAGGACACAACACC  443

seq1  TTAGAATGTTTTGATGCCAATCAACCCGTGTGACTAGCCAGAGAGCACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATGTTTTGATGCCAATCAACCCGTGTGACTAGCCAGAGAGCACAT  493

seq1  TTCAGACGGTTAAAGAAGTGACCCGGAGAATAATAAACTCTTAAGCCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACGGTTAAAGAAGTGACCCGGAGAATAATAAACTCTTAAGCCACC  543

seq1  CGATGAGAACATGACATGACTGCATGTAAACAGGCAATATGTCCAATATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGAGAACATGACATGACTGCATGTAAACAGGCAATATGTCCAATATG  593

seq1  TAAACATCCCATCTCCAAACATCCTGAGTTAGCAAATTGACCAACTGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATCCCATCTCCAAACATCCTGAGTTAGCAAATTGACCAACTGAAC  643

seq1  AAAATGTTGGACAGGACACCGTGAAGGGAAACGGTTGCCAAGCCAAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTGGACAGGACACCGTGAAGGGAAACGGTTGCCAAGCCAAAATA  693

seq1  AATACTGTCGTCACGTGTGACATTTCAGAAAGACAAGGCTTCAAGAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGTCGTCACGTGTGACATTTCAGAAAGACAAGGCTTCAAGAGAAT  743

seq1  AGGAGATGAAGAAACCCTTGCTAGTAATGAATAGGAAGAGAAACCCGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATGAAGAAACCCTTGCTAGTAATGAATAGGAAGAGAAACCCGGGA  793

seq1  TGTTTAAGAAAGACAAACAAAAGCAAAGGCAGAATTGATAGCAATAGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAGAAAGACAAACAAAAGCAAAGGCAGAATTGATAGCAATAGTGG  843

seq1  TTTAGGAGTGTGAACTGCGTTTCAGGAAGCCCGCAGGGTACTGGCTCACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAGTGTGAACTGCGTTTCAGGAAGCCCGCAGGGTACTGGCTCACC  893

seq1  TTCGGACAGGATAGCTACATCTGCTGTGCCTCCAAGTTCAGAAGGGTTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGACAGGATAGCTACATCTGCTGTGCCTCCAAGTTCAGAAGGGTTCT  943

seq1  GTTGCCTCAAAAGGCAATAGGACCCAAACTGCATTTTTTTTTTTTCCTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCTCAAAAGGCAATAGGACCCAAACTGCATTTTTTTTTTTTCCTTT  993

seq1  ACAGAATTC  1009
      |||||||||
seq2  ACAGAATTC  1002


seq1: chr14_99895887_99896532
seq2: B6Ng01-192L13.g_68_713

seq1  GAATTCTGTTGATGCACAAACCCAGAATAGTTTTTATGAGGTCTAGAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTGATGCACAAACCCAGAATAGTTTTTATGAGGTCTAGAACT  50

seq1  TACTCAGTTTGAGTGACTCCTTAAGGTAATCAAATTTAAAATATGAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGTTTGAGTGACTCCTTAAGGTAATCAAATTTAAAATATGAAATT  100

seq1  AGCTACAAAGTGATAATTTTTTGTGAAAAGGAAAACATTTTTAAATTCGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAAAGTGATAATTTTTTGTGAAAAGGAAAACATTTTTAAATTCGT  150

seq1  CACATTTCCAAAAATATAAAATTTAAAATAGATAACCTCTCTACTAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTCCAAAAATATAAAATTTAAAATAGATAACCTCTCTACTAACTG  200

seq1  TCTAATTCTATAGCTTTCTTCTATATTTTTTTGCTTCACATTTTTTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTCTATAGCTTTCTTCTATATTTTTTTGCTTCACATTTTTTTCCT  250

seq1  CTCTTACTCTAGCATATTTTATGTAGGATTATTTTTAGAAAGACTAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACTCTAGCATATTTTATGTAGGATTATTTTTAGAAAGACTAGGAA  300

seq1  GATAACCTGTTCTTCCTGATAAGATGGTTCATCAAAGTCTGGCTTTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACCTGTTCTTCCTGATAAGATGGTTCATCAAAGTCTGGCTTTCTTG  350

seq1  TGCAGATGCTGTTGGGCTACATAAAACTCATAGCGTTACTACTATGTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGCTGTTGGGCTACATAAAACTCATAGCGTTACTACTATGTCCA  400

seq1  TACAAAATCCATATGCTAAGCCCTAATAAGTGATGGGAGACTCTCAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAATCCATATGCTAAGCCCTAATAAGTGATGGGAGACTCTCAGGAG  450

seq1  ACTCGGCTTTGGAATGGGGATTGGCTAATGAAGATGGAGCCCTTAGGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGCTTTGGAATGGGGATTGGCTAATGAAGATGGAGCCCTTAGGGAT  500

seq1  GAAGTCTGTGGCTGTGTATTGGAGGCCTCAGAGAGAAACTAACCATACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTGTGGCTGTGTATTGGAGGCCTCAGAGAGAAACTAACCATACAC  550

seq1  GTGCCAAGAGTTGCCCTCACCAGACACTGAATCTGTCCTTATCATGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAAGAGTTGCCCTCACCAGACACTGAATCTGTCCTTATCATGTGTG  600

seq1  TGTATCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  646


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