BAC Information

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BAC

Clone NameB6Ng01-194A11
Chromosome14 (Build37)
Map Location 105,916,991 - 106,069,482
singlet/doubletdoublet
Overlap geneLOC620376
Upstream gene2610206B13Rik, D130009I18Rik, LOC435420, Rbm26, LOC621103, LOC100043466, Ndfip2
Downstream geneLOC100043469, Spry2, EG621364, LOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194A11.bB6Ng01-194A11.g
ACCGA016833GA016834
length1,235149
definitionB6Ng01-194A11.b B6Ng01-194A11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,068,261 - 106,069,482)(105,916,991 - 105,917,137)
sequence
gaattccttcccttcgaggttccaaatagttgccttaggaaccatttatc
tgcaacatttgagtgagaatctcctaaatatcatgggagttacactgttt
ccatattccattagtatcttctttctaaagtgtggtctcctatggcaagt
gtcttctgtaagtggcatccctagtgtctaattcagcacaggctactcaa
gaacgtgtcattaagtaaacatttgaataaataagttctgaggctgaggc
aggaggattgccatgaattcaaggtcagcatgaattacatagtgagaccc
ttttctaaaagcataagaataggtcaggtatttccagtctctgcaaaggt
ctggaatgttctaccatcttgcccaatccaggtaaaatcggtttactgac
cactgccccaccccgacccccacgacttttacatcccaaagccttaatgt
cagcttctcacttcatggtggcatggtagctaagacaggtctggttgtgt
tgatctatttgtatggttatgtctcagaagtaggacaaagatgggaacag
gagaaaatgacagcagttaaaattactatcctttcagatttgtcatgaga
ataaaaacccagcattatatatatataacagtttaaaagttctaatgtat
tatatagaaaggtaaatggtggataaatagatagagatcttgaaaaaata
tgtattcttgaactatcttgtcaaatataccaaattttaccccaagacct
cttttcattcttaacttttcagtacagagaattctcaaagtctgaaagac
aaacacaaatcataacttaatagcaatgacattaaaatttttccttacat
ctaaccttgactaattctcacatggatttcagaaatatgaataatgtctt
catgcaattcagcaggcacagaaaataggtgccattatttctgttctaat
gacagattttgaggttagggtgactcatgaacagctgagcagccagtcag
tagaagaaaccaaaatagcacggaaacgcctccattcccaccccacgcct
caaacttcggctcaaaccttcgagtgcacccctccgcgggagaatgaggg
aagcgtgaatgccctattgaagagcttctttgcaaggttaatgaactgaa
ccatattcctgggtgtccatcctggagcgccagcgcactcttcgacattc
ttggcaggaaaaaaggggaaagagaagccaagaaa
cggaattcaaaacaaaaccaagcaaaacaagaggcctcgagttaaaagaa
agaaaggaagagaaaaaaaatgcttccaacgaacaaaatcccaaggatct
tgtttaagaattatataaagaaattcaagagggtggggtgggggagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_106068261_106069482
seq2: B6Ng01-194A11.b_47_1281 (reverse)

seq1  TTTCTT-GCCTCTCTCTCCCCTCTCTTCCTGCC-AGATTGTCTGAGAGTG  48
      |||||| || ||||| |||||| | |||||||| ||| ||||  ||||||
seq2  TTTCTTGGCTTCTCTTTCCCCTTTTTTCCTGCCAAGAATGTCGAAGAGTG  50

seq1  CGCT-GCGCTCAGGGATGGCCA-CCAGGGATA-GCTTCAGCTCATTAA-C  94
      |||| ||||||  |||||| || ||||| ||| | ||||| ||||||| |
seq2  CGCTGGCGCTCCAGGATGGACACCCAGGAATATGGTTCAGTTCATTAACC  100

seq1  TTGC-AGGAAGCTCTTC-ATA-GGCA-TCACGCTTCCCTCA-TCTCCCGC  139
      |||| | |||||||||| ||| |||| |||||||||||||| ||||||||
seq2  TTGCAAAGAAGCTCTTCAATAGGGCATTCACGCTTCCCTCATTCTCCCGC  150

seq1  GGA-GGGTGCACTCG-AGGTTTGAGCCGAGGTTTGA-GCGTGGGGTGGGA  186
      ||| ||||||||||| ||||||||||||| |||||| |||||||||||||
seq2  GGAGGGGTGCACTCGAAGGTTTGAGCCGAAGTTTGAGGCGTGGGGTGGGA  200

seq1  ATGGAGGCGTTTCCGTGCTATTTTGGTTTCTTCTACTGACTGGCTGCTCA  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGCGTTTCCGTGCTATTTTGGTTTCTTCTACTGACTGGCTGCTCA  250

seq1  GCTGTTCATGAGTCACCCTAACCTCAAAATCTGTCATTAGAACAGAAATA  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCATGAGTCACCCTAACCTCAAAATCTGTCATTAGAACAGAAATA  300

seq1  ATGGCACCTATTTTCTGTGCCTGCCTGAATTGCATGAAGACATTATTCAT  336
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATGGCACCTATTTTCTGTGCCTG-CTGAATTGCATGAAGACATTATTCAT  349

seq1  ATTTCTGAAATCCATGTGAGAATTAGTCAAGGTTAGATGTAAGGAAAAAT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAAATCCATGTGAGAATTAGTCAAGGTTAGATGTAAGGAAAAAT  399

seq1  TTTAATGTCATTGCTATTAAGTTATGATTTGTGTTTGTCTTTCAGACTTT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTCATTGCTATTAAGTTATGATTTGTGTTTGTCTTTCAGACTTT  449

seq1  GAGAATTCTCTGTACTGAAAAGTTAAGAATGAAAAGAGGTCTTGGGGTAA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCTCTGTACTGAAAAGTTAAGAATGAAAAGAGGTCTTGGGGTAA  499

seq1  AATTTGGTATATTTGACAAGATAGTTCAAGAATACATATTTTTTCAAGAT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGTATATTTGACAAGATAGTTCAAGAATACATATTTTTTCAAGAT  549

seq1  CTCTATCTATTTATCCACCATTTACCTTTCTATATAATACATTAGAACTT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCTATTTATCCACCATTTACCTTTCTATATAATACATTAGAACTT  599

seq1  TTAAACTGTTATATATATATAATGCTGGGTTTTTATTCTCATGACAAATC  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTGTTATATATATATAATGCTGGGTTTTTATTCTCATGACAAATC  649

seq1  TGAAAGGATAGTAATTTTAACTGCTGTCATTTTCTCCTGTTCCCATCTTT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGATAGTAATTTTAACTGCTGTCATTTTCTCCTGTTCCCATCTTT  699

seq1  GTCCTACTTCTGAGACATAACCATACAAATAGATCAACACAACCAGACCT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTACTTCTGAGACATAACCATACAAATAGATCAACACAACCAGACCT  749

seq1  GTCTTAGCTACCATGCCACCATGAAGTGAGAAGCTGACATTAAGGCTTTG  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGCTACCATGCCACCATGAAGTGAGAAGCTGACATTAAGGCTTTG  799

seq1  GGATGTAAAAGTCGTGGGGGTCGGGGTGGGGCAGTGGTCAGTAAACCGAT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTAAAAGTCGTGGGGGTCGGGGTGGGGCAGTGGTCAGTAAACCGAT  849

seq1  TTTACCTGGATTGGGCAAGATGGTAGAACATTCCAGACCTTTGCAGAGAC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTGGATTGGGCAAGATGGTAGAACATTCCAGACCTTTGCAGAGAC  899

seq1  TGGAAATACCTGACCTATTCTTATGCTTTTAGAAAAGGGTCTCACTATGT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATACCTGACCTATTCTTATGCTTTTAGAAAAGGGTCTCACTATGT  949

seq1  AATTCATGCTGACCTTGAATTCATGGCAATCCTCCTGCCTCAGCCTCAGA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGCTGACCTTGAATTCATGGCAATCCTCCTGCCTCAGCCTCAGA  999

seq1  ACTTATTTATTCAAATGTTTACTTAATGACACGTTCTTGAGTAGCCTGTG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTATTCAAATGTTTACTTAATGACACGTTCTTGAGTAGCCTGTG  1049

seq1  CTGAATTAGACACTAGGGATGCCACTTACAGAAGACACTTGCCATAGGAG  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTAGACACTAGGGATGCCACTTACAGAAGACACTTGCCATAGGAG  1099

seq1  ACCACACTTTAGAAAGAAGATACTAATGGAATATGGAAACAGTGTAACTC  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACTTTAGAAAGAAGATACTAATGGAATATGGAAACAGTGTAACTC  1149

seq1  CCATGATATTTAGGAGATTCTCACTCAAATGTTGCAGATAAATGGTTCCT  1186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATATTTAGGAGATTCTCACTCAAATGTTGCAGATAAATGGTTCCT  1199

seq1  AAGGCAACTATTTGGAACCTCGAAGGGAAGGAATTC  1222
      ||||||||||||||||||||||||||||||||||||
seq2  AAGGCAACTATTTGGAACCTCGAAGGGAAGGAATTC  1235

seq1: chr14_105916991_105917137
seq2: B6Ng01-194A11.g_62_208

seq1  GAATTCAAAACAAAACCAAGCAAAACAAGAGGCCTCGAGTTAAAAGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACAAAACCAAGCAAAACAAGAGGCCTCGAGTTAAAAGAAAG  50

seq1  AAAGGAAGAGAAAAAAAATGCTTCCAACGAACAAAATCCCAAGGATCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGAGAAAAAAAATGCTTCCAACGAACAAAATCCCAAGGATCTTG  100

seq1  TTTAAGAATTATATAAAGAAATTCAAGAGGGTGGGGTGGGGGAGGGG  147
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAATTATATAAAGAAATTCAAGAGGGTGGGGTGGGGGAGGGG  147