BAC Information

Click to search

BAC

Clone NameB6Ng01-196B14
Chromosome14 (Build37)
Map Location 5,030,195 - 5,159,344
singlet/doubletdoublet
Overlap geneLOC666808, EG666800, LOC100041374, 4930555G01Rik
Upstream geneLOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815
Downstream geneEG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706, LOC100041195, LOC100041545, LOC100041565, LOC100041215, LOC100041226, ENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268, LOC100041279, LOC100041651, LOC100041287, LOC100041299, LOC666637
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196B14.bB6Ng01-196B14.g
ACCGA018332GA018333
length1,2201,011
definitionB6Ng01-196B14.b B6Ng01-196B14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(5,158,127 - 5,159,344)(5,030,195 - 5,031,178)
sequence
gaattctcctggatgcaagttcagctccaagcaactcaatctctcaatga
gtaaaatccaagacaaagtacaaggcaaagctttactgagcagaggtagc
aggaaatgcaatggtggcaggcaatgaggaaaacaacctggaatgcttaa
aagacacagtgagccacctgaccttccagtggtccttcacaattcaccaa
gagcagaaaagggacataaacacatggattttatacagcaatgtcctcct
tacctccatataccataactcttacatttcccctaaaaatttcaatgaga
atcaattgttttgtctcgagttattaaaaatctgaccctacaacaatatt
tgtgtccttttttttctttgcagttaggtgagcatgcagaataattggac
tgctgtatttgatatttcataggttcaaactaaaacctcagagtgcattt
gtcattaaatttggcctctagagacacacacagctgcatttatgcacaat
caaacacacacgaacacacacaaacacatttgtatataaaagcacccata
tcacaaacacaaaattaccttatattaagcaaacacacaaccttagtata
aacaagctcaggcaaaggtggtcaaaacacacacagacaaacacacacac
catacaaaagaaacacaaacataaacaggacacaatacacacacagagac
acacaaacacaaatcaatgaaaatattactgttgcccagcacatttcctg
ttgcatgagcacctactaggacctctgatgtgtacgtgtgtaaggttctt
agactcagcagtctttgcggccctcatctgtaattaactcctcttcagaa
acttttttcatgcagatactttctggtcctacaaggaagttacaagctcg
gcacagataacctggacaacacaataccaaattcccaagaaagagattcc
taagaaaagcccacagcaagccccatgttggttccttggtagcatcagag
gaagacagtgacttttgggtcactacccaggaacttttccactatacaat
ttcatgtgataataaatcttcctcaatatcagtcagaagaaaagctggat
gattgatgtgcttgtgactttatataaatgcagcactgtgccactatgag
gggaaatcctaacttgtatcaggcatgcccagaatagttaggcaaaaaca
aatgtaagacagagagttat
gaattcaggtgagtggtagtgagtagactttcttctattctattctttta
atgtgccggtgccctggaagccacaagagactgttaaatcccccagagct
ggggatagaggcagaactgagctgtctgatgtgggtgatgagaaccaaac
tgaggtatcctgtaagatgagcttgcaccctaaatgactgggttatctag
tcgttgcagagaatcaatttccacattgagttattgtcagaaatcaggtt
gtaaagtgccagggatgcagtgctgttgcccagtatctacaaggaggtat
tgatttctttctgaaagaaaacagaaaaggacacagtaggacctggggga
taagggaagtaccaattcagcctgaataaaaggctgggcacatggctgag
cagtcatggatataatgtgtgcctttgcatgtggtaaaggagggttcaga
acagggaagggcttctctcactgaaaaagacaatgccctttgacaaagga
ggtaaaaacatccagcggaaaaaagacagcatttttcaagaaatggtgct
ggttcaactgtcacttagcatgtagcagaatgcaaattgacccattcttt
tctcctggtataaagctcaaatccaagtggatcaaggacctccgcatgaa
accagatacactgaaattaatagaaaagaaagtcgggaagagccttaaac
acatgggcataggggaaattttcctgaatagaacaccaatagcttatgct
ctaagatcaagaattgacaaatgagacctcataaaattgcaaaccttctg
taaggcaaaggacactgttaataggacaaaacagcaaccaaacagattgg
gttcagatcttttccaatcctacgtccgatagaggtcttaatatccaata
tatactaagaacttcaggaagctaaacttccagagaaacaataaccccat
ttaaaaatgggggctcagagctaaacaaagaattctcacctgaggaatac
tgaatgtctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_5158127_5159344
seq2: B6Ng01-196B14.b_45_1264 (reverse)

seq1  ATAACTCT---GCTAACA-TTGTTTTTG-CTAACTATATCGTGGGCATGG  45
      ||||||||    || ||| ||||||||| |||||||| || |||||||| 
seq2  ATAACTCTCTGTCTTACATTTGTTTTTGCCTAACTAT-TC-TGGGCATGC  48

seq1  CTTTGTTTCAGGTTA-GATTCCCCCTCATAGTTGGCACAGTGCTGCATTT  94
      |  || | || |||| |||| |||||||||| ||||||||||||||||||
seq2  C--TGATACAAGTTAGGATTTCCCCTCATAG-TGGCACAGTGCTGCATTT  95

seq1  -TATAAAGGTCAC-AGCACATCAATCAACCAGC-TTTCTTCTGACTGATA  141
       |||||| ||||| ||||||||||||| ||||| ||||||||||||||||
seq2  ATATAAA-GTCACAAGCACATCAATCATCCAGCTTTTCTTCTGACTGATA  144

seq1  TTGAGGAAGATTTAATATCACATG-AATTGTAATAGGTGGAAAAGTTCCT  190
      |||||||||||||| ||||||||| |||||| ||| ||||||||||||||
seq2  TTGAGGAAGATTTATTATCACATGAAATTGT-ATA-GTGGAAAAGTTCCT  192

seq1  GGGTAGTGA-CCAAAAGTCACTGTCTTCCTCTGATGCTACCAAGGAACCA  239
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGTGACCCAAAAGTCACTGTCTTCCTCTGATGCTACCAAGGAACCA  242

seq1  ACATGGGGCTTGCTGTGGGCTTTTCTTAGGAATCTCTTTCTTGGGAATTT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGGCTTGCTGTGGGCTTTTCTTAGGAATCTCTTTCTTGGGAATTT  292

seq1  GGTATTGTGTTGTCCAGGTTATCTGTGCCGAGCTTGTAACTTCCTTGTAG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTGTGTTGTCCAGGTTATCTGTGCCGAGCTTGTAACTTCCTTGTAG  342

seq1  GACCAGAAAGTATCTGCATGAAAAAAGTTTCTGAAGAGGAGTTAATTACA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGAAAGTATCTGCATGAAAAAAGTTTCTGAAGAGGAGTTAATTACA  392

seq1  GATGAGGGCCGCAAAGACTGCCTGAGTCTAAGAACCTTACACACGTACAC  439
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GATGAGGGCCGCAAAGACTG-CTGAGTCTAAGAACCTTACACACGTACAC  441

seq1  ATCAGAGGTCCTAGTAGGTGCTCATGCAACAGGAAATGTGCTGGGCAACA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGGTCCTAGTAGGTGCTCATGCAACAGGAAATGTGCTGGGCAACA  491

seq1  GTAATATTTTCATTGATTTGTGTTTGTGTGTCTCTGTGTGTGTATTGTGT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATTTTCATTGATTTGTGTTTGTGTGTCTCTGTGTGTGTATTGTGT  541

seq1  CCTGTTTATGTTTGTGTTTCTTTTGTATGGTGTGTGTGTTTGTCTGTGTG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTATGTTTGTGTTTCTTTTGTATGGTGTGTGTGTTTGTCTGTGTG  591

seq1  TGTTTTGACCACCTTTGCCTGAGCTTGTTTATACTAAGGTTGTGTGTTTG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGACCACCTTTGCCTGAGCTTGTTTATACTAAGGTTGTGTGTTTG  641

seq1  CTTAATATAAGGTAATTTTGTGTTTGTGATATGGGTGCTTTTATATACAA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATATAAGGTAATTTTGTGTTTGTGATATGGGTGCTTTTATATACAA  691

seq1  ATGTGTTTGTGTGTGTTCGTGTGTGTTTGATTGTGCATAAATGCAGCTGT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTTGTGTGTGTTCGTGTGTGTTTGATTGTGCATAAATGCAGCTGT  741

seq1  GTGTGTCTCTAGAGGCCAAATTTAATGACAAATGCACTCTGAGGTTTTAG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCTCTAGAGGCCAAATTTAATGACAAATGCACTCTGAGGTTTTAG  791

seq1  TTTGAACCTATGAAATATCAAATACAGCAGTCCAATTATTCTGCATGCTC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACCTATGAAATATCAAATACAGCAGTCCAATTATTCTGCATGCTC  841

seq1  ACCTAACTGCAAAGAAAAAAAAGGACACAAATATTGTTGTAGGGTCAGAT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAACTGCAAAGAAAAAAAAGGACACAAATATTGTTGTAGGGTCAGAT  891

seq1  TTTTAATAACTCGAGACAAAACAATTGATTCTCATTGAAATTTTTAGGGG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATAACTCGAGACAAAACAATTGATTCTCATTGAAATTTTTAGGGG  941

seq1  AAATGTAAGAGTTATGGTATATGGAGGTAAGGAGGACATTGCTGTATAAA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAAGAGTTATGGTATATGGAGGTAAGGAGGACATTGCTGTATAAA  991

seq1  ATCCATGTGTTTATGTCCCTTTTCTGCTCTTGGTGAATTGTGAAGGACCA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGTGTTTATGTCCCTTTTCTGCTCTTGGTGAATTGTGAAGGACCA  1041

seq1  CTGGAAGGTCAGGTGGCTCACTGTGTCTTTTAAGCATTCCAGGTTGTTTT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGGTCAGGTGGCTCACTGTGTCTTTTAAGCATTCCAGGTTGTTTT  1091

seq1  CCTCATTGCCTGCCACCATTGCATTTCCTGCTACCTCTGCTCAGTAAAGC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTGCCTGCCACCATTGCATTTCCTGCTACCTCTGCTCAGTAAAGC  1141

seq1  TTTGCCTTGTACTTTGTCTTGGATTTTACTCATTGAGAGATTGAGTTGCT  1189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTGTACTTTGTCTTGGATTTTACTCATTGAGAGATTGAGTTGCT  1191

seq1  TGGAGCTGAACTTGCATCCAGGAGAATTC  1218
      |||||||||||||||||||||||||||||
seq2  TGGAGCTGAACTTGCATCCAGGAGAATTC  1220

seq1: chr14_5030195_5031178
seq2: B6Ng01-196B14.g_66_1052

seq1  GAATTCAGGTGAGTGGTAGTGAGTAGACTTTCTTCTATTCTATTCTTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTGAGTGGTAGTGAGTAGACTTTCTTCTATTCTATTCTTTTA  50

seq1  ATGTGCCGGTGCCCTGGAAGCCACAAGAGACTGTTAAATCCCCCAGAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCGGTGCCCTGGAAGCCACAAGAGACTGTTAAATCCCCCAGAGCT  100

seq1  GGGGATAGAGGCAGAACTGAGCTGTCTGATGTGGGTGATGAGAACCAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATAGAGGCAGAACTGAGCTGTCTGATGTGGGTGATGAGAACCAAAC  150

seq1  TGAGGTATCCTGTAAGATGAGCTTGCACCCTAAATGACTGGGTTATCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTATCCTGTAAGATGAGCTTGCACCCTAAATGACTGGGTTATCTAG  200

seq1  TCGTTGCAGAGAATCAATTTCCACATTGAGTTATTGTCAGAAATCAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTGCAGAGAATCAATTTCCACATTGAGTTATTGTCAGAAATCAGGTT  250

seq1  GTAAAGTGCCAGGGATGCAGTGCTGTTGCCCAGTATCTACAAGGAGGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTGCCAGGGATGCAGTGCTGTTGCCCAGTATCTACAAGGAGGTAT  300

seq1  TGATTTCTTTCTGAAAGAAAACAGAAAAGGACACAGTAGGACCTGGGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCTTTCTGAAAGAAAACAGAAAAGGACACAGTAGGACCTGGGGGA  350

seq1  TAAGGGAAGTACCAATTCAGCCTGAATAAAAGGCTGGGCACATGGCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGAAGTACCAATTCAGCCTGAATAAAAGGCTGGGCACATGGCTGAG  400

seq1  CAGTCATGGATATAATGTGTGCCTTTGCATGTGGTAAAGGAGGGTTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATGGATATAATGTGTGCCTTTGCATGTGGTAAAGGAGGGTTCAGA  450

seq1  ACAGGGAAGGGCTTCTCTCACTGAAAAAGACAATGCCCTTTGACAAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAAGGGCTTCTCTCACTGAAAAAGACAATGCCCTTTGACAAAGGA  500

seq1  GGTAAAAACATCCAGCGGAAAAAAGACAGCATTTTTCAAGAAATGGTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAACATCCAGCGGAAAAAAGACAGCATTTTTCAAGAAATGGTGCT  550

seq1  GGTTCAACTGTCACTTAGCATGTAGCAGAATGCAAATTGACCCATTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAACTGTCACTTAGCATGTAGCAGAATGCAAATTGACCCATTCTTT  600

seq1  TCTCCTGGTATAAAGCTCAAATCCAAGTGGATCAAGGACCTCCGCATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGGTATAAAGCTCAAATCCAAGTGGATCAAGGACCTCCGCATGAA  650

seq1  ACCAGATACACTGAAATTAATAGAAAAGAAAGTCGGGAAGAGCCTTAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGATACACTGAAATTAATAGAAAAGAAAGTCGGGAAGAGCCTTAAAC  700

seq1  ACATGGGCATAGGGGAAATTTTCCTGAATAGAACACCAATAGCTTATGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGCATAGGGGAAATTTTCCTGAATAGAACACCAATAGCTTATGCT  750

seq1  CTAAGATCAAGAATTGACAAATGAGACCTCATAAAATTGCAAACCTTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATCAAGAATTGACAAATGAGACCTCATAAAATTGCAAACCTTCTG  800

seq1  TAAGGCAAAGGACACTGTTAATAGGACAAAACAGCAACCAAACAGATTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAAAGGACACTGTTAATAGGACAAAACAGCAACCAAACAGATTGG  850

seq1  GTTCAGATCTTTTCCAATCCTACGTCCGATAGAGG-CCTAATATCCAATA  899
      ||||||||||||||||||||||||||||||||||| | ||||||||||||
seq2  GTTCAGATCTTTTCCAATCCTACGTCCGATAGAGGTCTTAATATCCAATA  900

seq1  TATACTAAGAAC-TCAGGAAGCTAAAC-TCCAGAGAAACAAATAACCCCA  947
      |||||||||||| |||||||||||||| ||||||||||| ||||||||||
seq2  TATACTAAGAACTTCAGGAAGCTAAACTTCCAGAGAAAC-AATAACCCCA  949

seq1  TTAAAAAAT-GGGGCTCAGAGCTAAACAAAGAATTCTC  984
      || |||||| ||||||||||||||||||||||||||||
seq2  TTTAAAAATGGGGGCTCAGAGCTAAACAAAGAATTCTC  987