BAC Information

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BAC

Clone NameB6Ng01-196H09
Chromosome14 (Build37)
Map Location 84,404,263 - 84,405,365
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776
Downstream geneLOC100043280, LOC100043285, Pcdh17, 9630013A20Rik, LOC629794
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196H09.bB6Ng01-196H09.g
ACCGA018596GA018597
length1,1191,198
definitionB6Ng01-196H09.b B6Ng01-196H09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaatgttcctaaagtatactttttaatcaaaaaagctaatttta
ctttttatgttttaataaaataagattaaatcattttaggcatttcatgg
atgggaacacaggtgcaagttgctctggtaggcatggaatggtcacaata
tgaaactatcactgcatcatatatttatttcatacatcacacattcctta
tataaaagaaattgtctttcattctctaaccataaaagtaaatattttaa
cttataaattcaacataattttaattcaaagtacagtttaagaattccag
aaggaatattgtaattttgttcagaaaacttttttctcaaaagcaattca
gtatgaaattgatgccactgataaatatgttgttttatgtttactagaga
atcaacactgagtaaccaatggattcacacacttgcatataagacacaat
gcatttgattaagtcattaaatcattgagtttagttacccttagtcatat
tgcaaaatatatacattttaattgcagagacttttatttttccagttaag
tgcaaagacattctattttaaaagctatatgtgtagatgtgataagttat
cattaaataaaaacaagatttataaaatgagttgaactttaccttccaaa
aggatatatgatgttcttattttcatattctagtgaatgtttgcacacct
gtaaaaatgtgtctttctggaagtgttcacttttttgaagtgagtcgtac
ttagaattcatctttaaaatctataaagatcataatgagtgaaaaagata
atgaattaagttacggaggcacaatggtgcacaaatacacggagatggga
cagaaggatatttgaagaccaagtgaagtgaagctgctgcccctttttat
atgcaaatttccaggactgacctcaacagagaacatctgtgctgtgctcc
attttgctgttacctccagttgtttctatctcattctcattaaataatta
cactcatgctttactcccagcctaccttctgaacacctattaacccacaa
ctggatgccatagttaataatgcaatgaagctaccaggtaatatctctaa
aactggtgggtttcacaaa
gaattccatgaggtgcagagaagaaggtatagacttttgtgtttcagtga
aatgttcagtagatatctgttaggttcatttggtttataatatctgttgg
ttgaggggtttcgctggttagttttgggctggctgacctataaattcata
aaagggatgtattgaattttcccactatcattgtgggatggtcagtttgt
gacttgagctttttaatgtttcttttagaaacatgggtaacctttcattc
agagcagagattttaagaactgaaatatcatcgtggtagaattttacttt
ggtgagtatgaagagtcctttctagcctcttctgactaattctgttttga
tagctgttttgttaaatagtagaatatgtacacaagcattcatcttgatt
cattttcttataaaatctgtttccaaccccttattctgaggtaatatcta
tcttttgatgttgaagcaagtttcttatatgcagaaaaatgagagctcca
ttttcaaatcaattctgtggataaaaaaaactggtaattaattttattga
tattgagagatatcaatgactaatgattattaatttcttttatttggcat
tgttggtggttatgtcttcgtgtgtttctctgtgttcattagtttgatgg
tcagagattatttatttcccatgttctcaggtagttagtctttttgattt
tttgttttgttttgtttttgtttttgtttttgttttttgtcttctagtat
catctttagggtatgggtttttagatagaaattgcttagagtttgaatgc
tcagcccatagtaacaatattaggaggtgtgtcttttttggaataggtgt
agtcttgttggagtaaatgtgtaaacactttgagactttgaggctcctat
gttcaggcttctgccaaaatggaagaagaaccttcttcttggatagtctc
ctccttggtgggatactttcagatcaatattataggaattttcatattaa
cccacaaaagatggcatctgtaggattccaaaatacatttgcaacataaa
tgcattccagtatgtaactttttacaatagcatatgctagagtgaatgat
ccaatataggcattcccagtcctcgaaattgaagaactccatccatagta
gttaacttagcataccattaatggtacattgtagacgatcgtcatacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_84404263_84405365
seq2: B6Ng01-196H09.b_33_1151

seq1  GAATTCCAATGTTCCTAAAGTATACTTTTTAATCAAAAAAGCTAATTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATGTTCCTAAAGTATACTTTTTAATCAAAAAAGCTAATTTTA  50

seq1  CTTTTTATGTTTTAATAAAATAAGATTAAATCATTTTAGGCATTTCATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATGTTTTAATAAAATAAGATTAAATCATTTTAGGCATTTCATGG  100

seq1  ATGGGAACACAGGTGCAAGTTGCTCTGGTAGGCATGGAATGGTCACAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAACACAGGTGCAAGTTGCTCTGGTAGGCATGGAATGGTCACAATA  150

seq1  TGAAACTATCACTGCATCATATATTTATTTCATACATCACACATTCCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTATCACTGCATCATATATTTATTTCATACATCACACATTCCTTA  200

seq1  TATAAAAGAAATTGTCTTTCATTCTCTAACCATAAAAGTAAATATTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGAAATTGTCTTTCATTCTCTAACCATAAAAGTAAATATTTTAA  250

seq1  CTTATAAATTCAACATAATTTTAATTCAAAGTACAGTTTAAGAATTCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAATTCAACATAATTTTAATTCAAAGTACAGTTTAAGAATTCCAG  300

seq1  AAGGAATATTGTAATTTTGTTCAGAAAACTTTTTTCTCAAAAGCAATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATATTGTAATTTTGTTCAGAAAACTTTTTTCTCAAAAGCAATTCA  350

seq1  GTATGAAATTGATGCCACTGATAAATATGTTGTTTTATGTTTACTAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAAATTGATGCCACTGATAAATATGTTGTTTTATGTTTACTAGAGA  400

seq1  ATCAACACTGAGTAACCAATGGATTCACACACTTGCATATAAGACACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACACTGAGTAACCAATGGATTCACACACTTGCATATAAGACACAAT  450

seq1  GCATTTGATTAAGTCATTAAATCATTGAGTTTAGTTACCCTTAGTCATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGATTAAGTCATTAAATCATTGAGTTTAGTTACCCTTAGTCATAT  500

seq1  TGCAAAATATATACATTTTAATTGCAGAGACTTTTATTTTTCCAGTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATATATACATTTTAATTGCAGAGACTTTTATTTTTCCAGTTAAG  550

seq1  TGCAAAGACATTCTATTTTAAAAGCTATATGTGTAGATGTGATAAGTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGACATTCTATTTTAAAAGCTATATGTGTAGATGTGATAAGTTAT  600

seq1  CATTAAATAAAAACAAGA-TTATAAAATGAGTTGAACTTTACCTTCCAAA  649
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CATTAAATAAAAACAAGATTTATAAAATGAGTTGAACTTTACCTTCCAAA  650

seq1  AGGATATATGATGTTCTTA-TTTCATATTCTAGTGAATGTTTGCACACCT  698
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGGATATATGATGTTCTTATTTTCATATTCTAGTGAATGTTTGCACACCT  700

seq1  GTAAAAATGTGTCTTTCTGGAAGTGTTCACTTTTTTGAAGTGAGTCGTAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAATGTGTCTTTCTGGAAGTGTTCACTTTTTTGAAGTGAGTCGTAC  750

seq1  TTAGAATTCATC-TTAAAATCTATAAAGATCATAATGAGTGAAAAAGATA  797
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTCATCTTTAAAATCTATAAAGATCATAATGAGTGAAAAAGATA  800

seq1  ATGAATTAAGTTA-AGAGGCACAATGGTGCACAAATACACGGAGAT-GGA  845
      |||||||||||||  ||||||||||||||||||||||||||||||| |||
seq2  ATGAATTAAGTTACGGAGGCACAATGGTGCACAAATACACGGAGATGGGA  850

seq1  CAGAAGGATATTTGAAGACCAAGTGAAGTGAAGCTGCTGCCCCTTTTTAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGATATTTGAAGACCAAGTGAAGTGAAGCTGCTGCCCCTTTTTAT  900

seq1  ATGCAAA-TTCCAGGACTGACCTCAACAGAGAACATCTGTGCTGTGCTCC  944
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATTTCCAGGACTGACCTCAACAGAGAACATCTGTGCTGTGCTCC  950

seq1  ATTTTGCTGTTACCTCCAGTTGTTTCTATCTCATTCTCATTAAATAATAA  994
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATTTTGCTGTTACCTCCAGTTGTTTCTATCTCATTCTCATTAAATAATTA  1000

seq1  CACTCATGC-TTACTCCCAGCCAACC-TCTGAACACCTA-TAACCCACCA  1041
      ||||||||| |||||||||||| ||| |||||||||||| ||||||| ||
seq2  CACTCATGCTTTACTCCCAGCCTACCTTCTGAACACCTATTAACCCA-CA  1049

seq1  ACTGGATG-CATAGTTAATAATGCAA-GAAGCTAACA---AGTATATCTA  1086
      |||||||| ||||||||||||||||| ||||||| ||   | ||| ||||
seq2  ACTGGATGCCATAGTTAATAATGCAATGAAGCTACCAGGTAATATCTCTA  1099

seq1  AAACT-GTGG--TTCACAAA  1103
      ||||| ||||  ||||||||
seq2  AAACTGGTGGGTTTCACAAA  1119