BAC Information

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BAC

Clone NameB6Ng01-196P10
Chromosome14 (Build37)
Map Location 41,708,677 - 41,709,775
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040439, LOC218945, LOC100040470, LOC382876, Sh2d4b
Downstream geneTspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079, Mbl1, Sftpd, LOC666093, EG666099, LOC100040545, LOC676294, LOC545034, LOC100040587, EG666138, EG624191, EG666149, LOC666155, EG666156, LOC100040642, LOC100041729, LOC624277, LOC100041810, EG666186, LOC100041722, LOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196P10.bB6Ng01-196P10.g
ACCGA018962GA018963
length1,1221,088
definitionB6Ng01-196P10.b B6Ng01-196P10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcctacatgaggaacactactagaaagatccctgaaggcaaag
ccaggcttccctaccctggggaagtcaggagggcacctgggttcctgagc
aggagaaaagctttgagagtttctgagaggaagtgttaaagagaaggcac
tggaaggaggttgcagggatatgcccctccatacccccttagatgtacgt
acctcatactggcctagaactagctgtgtagctggggtccctgaacatct
gaccctttccaaggattgaatttactggcatgtgccaccacactcagttt
tatgagacttgtgtcggggcttaagcacatctccaactctgcttttaaaa
caagtcaatgcatgctattttcctgagcaaaccccagttactaaagtcta
aacccgggtcctcacagggttctcaaaatccccagtgatctgcacggatg
gcccctcccaccagtctcactgactgcagcctgctggcctcaccctgggc
cgatcactacctgactactcagtgcacacatcaaacaccacatccctagc
acctcaatattggcttatcagtctgcctgggacccacttggctccttagc
gaatccgagtcttggttcatatgaatcctgttctttcgccatgctggaac
tcaaacccaggtctttacgtgtatgggctcttgtatggatctacgttctc
agaccagctcagtttgttcattaccctgcactcacggctctccccactcg
cttcctctgctctgtgttttccttagcattgaactttgtaaaccactact
ttactttattgatttgttgctgtatttttgtctgtctccctgctagataa
ataagcaaaccaccagcaggtgttttcgtctgcttcacggtgtagaagga
acactgcttgagttagttctggataaacatccataagaaaagaaaggaaa
ggctgggaggccacttctgttgtcatttttttaaacacacacaaaatctt
gggccttggatacctcagtatcatgttaaagtaaggaatggtggttggtt
tgcgcaacttttaatcctccagaaacgtgagcagcgattggtgtggaaaa
ccatagagttcagagtcagagt
gaattcaaagcatttggagaaacaggcctacaatgctataagcagaactt
gatgggcagttctggcaaggactcagaagaccagagtatcaataagtata
taaactgacgatgtgactgactgatgtatggttaagaggagggttttact
gtagatggaagggagagaacagccagaggcatctagaaagtccagagcag
agcgagaaagaagcaggctgaccgtggccagcagactggatctggtcatg
agaaagcaggagcagagagatgagagaaggagcgagatggaggtagagag
aaactgagaaaagaagacagagaaaaagagagagagatggagaacatgag
agaggggaaagcaggagacagagagagcacaaagctgaaaaagtggaggg
acctggagggtatcatcctgagtgaggtaacccaatcacaaaggaactcg
cacaatatgtactcactgataagtggatattagcccagaaacttaggata
cccaagatataagatacaacttgccaaacgcatgaaattcaagaagaacg
aagaccaaagtgtggacactttaccctttcttagaaatgggaacaaaaca
cccatggaaggagttacaaagacaaaatttggagctgtgacgaaaggatg
gaccatctagtgattgccatatgcagggatccatcccataatcagcttcc
aaatgctgacaccattacatacactagcaagattttgctgaaaggaccca
gatatagctgtctctttgtgagactatgccaaggcctagcaaacacagaa
gtggatgatcacagtcagctattgaatggaccacagggcccccaatggag
gagctagagaaattacccaaggagctaatgggaactgcaacccttatagg
tggaacaataatatgtagtaaccagttaccctcgagctcttgtctctagc
tgcataatgtatcaaaagaatggcctagctcggccatcactgcaagagaa
gtcccaattggaacttgccaacctttatgccccagtacatggtgatacgc
ccatggctcaaaacgtgggggagttgaaatgaagaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_41708677_41709775
seq2: B6Ng01-196P10.b_43_1164

seq1  GAATTCAGCCTACATGAGGAACACTACTAGAAAGATCCCTGAAGGCAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCTACATGAGGAACACTACTAGAAAGATCCCTGAAGGCAAAG  50

seq1  CCAGGCTTCCCTACCCTGGGGAAGTCAGGAGGGCACCTGGGTTCCTGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTTCCCTACCCTGGGGAAGTCAGGAGGGCACCTGGGTTCCTGAGC  100

seq1  AGGAGAAAAGCTTTGAGAGTTTCTGAGAGGAAGTGTTAAAGAGAAGGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAAAGCTTTGAGAGTTTCTGAGAGGAAGTGTTAAAGAGAAGGCAC  150

seq1  TGGAAGGAGGTTGCAGGGATATGCCCCTCCATACCCCCTTAGATGTACGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGAGGTTGCAGGGATATGCCCCTCCATACCCCCTTAGATGTACGT  200

seq1  ACCTCATACTGGCCTAGAACTAGCTGTGTAGCTGGGGTCCCTGAACATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATACTGGCCTAGAACTAGCTGTGTAGCTGGGGTCCCTGAACATCT  250

seq1  GACCCTTTCCAAGGATTGAATTTACTGGCATGTGCCACCACACTCAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTTTCCAAGGATTGAATTTACTGGCATGTGCCACCACACTCAGTTT  300

seq1  TATGAGACTTGTGTCGGGGCTTAAGCACATCTCCAACTCTGCTTTTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGACTTGTGTCGGGGCTTAAGCACATCTCCAACTCTGCTTTTAAAA  350

seq1  CAAGTCAATGCATGCTATTTTCCTGAGCAAACCCCAGTTACTAAAGTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAATGCATGCTATTTTCCTGAGCAAACCCCAGTTACTAAAGTCTA  400

seq1  AACCCGGGTCCTCACAGGGTTCTCAAAATCCCCAGTGATCTGCACGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGGGTCCTCACAGGGTTCTCAAAATCCCCAGTGATCTGCACGGATG  450

seq1  GCCCCTCCCACCAGTCTCACTGACTGCAGCCTGCTGGCCTCACCCTGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTCCCACCAGTCTCACTGACTGCAGCCTGCTGGCCTCACCCTGGGC  500

seq1  CGATCACTACCTGACTACTCAGTGCACACATCAAACACCACATCCCTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCACTACCTGACTACTCAGTGCACACATCAAACACCACATCCCTAGC  550

seq1  ACCTCAATATTGGCTTATCAGTCTGCCTGGGACCCACTTGGCTCCTTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAATATTGGCTTATCAGTCTGCCTGGGACCCACTTGGCTCCTTAGC  600

seq1  GAATCCGAGTCTTGGTTCATATGAATCCTGTTCTTTCGCCATGCTGGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCGAGTCTTGGTTCATATGAATCCTGTTCTTTCGCCATGCTGGAAC  650

seq1  TCAAACCCAGGTCTTTACGTGTATGGGCTCTTGTATGGATCTACGTTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCCAGGTCTTTACGTGTATGGGCTCTTGTATGGATCTACGTTCTC  700

seq1  AGACCAGCTCAGTTTGTTCATTACCCTGCACTCACGGCTCTCCCCACTCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGCTCAGTTTGTTCATTACCCTGCACTCACGGCTCTCCCCACTCG  750

seq1  CTTCCTCTGCTCTGTGTTTTTCCTTAGCATTGAACTTTGTAAACCACTAC  800
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTTCCTCTGCTCTGTG-TTTTCCTTAGCATTGAACTTTGTAAACCACTAC  799

seq1  TTTAC-TTATTGATTTGTTGCTGTATTTTTGTCTGTCTCCCTGCTAGAT-  848
      ||||| ||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTACTTTATTGATTTGTTGCTGTATTTTTGTCTGTCTCCCTGCTAGATA  849

seq1  AATAAGC-AACCACCAGCAGGTGTTTTCGTCTGCTTCACGGTGTAGAAGG  897
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCAAACCACCAGCAGGTGTTTTCGTCTGCTTCACGGTGTAGAAGG  899

seq1  AACACTGC-TGAG-TAGTCCTGGATAAACATCCAT-AGAAAAG-AAGGAA  943
      |||||||| |||| |||| |||||||||||||||| ||||||| ||||||
seq2  AACACTGCTTGAGTTAGTTCTGGATAAACATCCATAAGAAAAGAAAGGAA  949

seq1  AGGCTGGGGAGGCACTTCTGTTGTCA-TTTTTTAAACACACACAAAATCC  992
      ||||||||  | |||||||||||||| |||||||||||||||||||||| 
seq2  AGGCTGGGAGGCCACTTCTGTTGTCATTTTTTTAAACACACACAAAATCT  999

seq1  TGGGC--TTGATA-CTCAGTATCATG-TAAAGT-AGGAATGGTG--TG--  1033
      |||||  | |||| |||||||||||| |||||| ||||||||||  ||  
seq2  TGGGCCTTGGATACCTCAGTATCATGTTAAAGTAAGGAATGGTGGTTGGT  1049

seq1  TTGCGC-ACTTTTAATC--TCAG-AACGTGAGCAGCGA-TGGTG-GGAAA  1077
      |||||| ||||||||||   ||| |||||||||||||| ||||| |||||
seq2  TTGCGCAACTTTTAATCCTCCAGAAACGTGAGCAGCGATTGGTGTGGAAA  1099

seq1  ACCA-AGAGTTCAGAGTCAGAGT  1099
      |||| ||||||||||||||||||
seq2  ACCATAGAGTTCAGAGTCAGAGT  1122