BAC Information

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BAC

Clone NameB6Ng01-198O20
Chromosome14 (Build37)
Map Location 20,568,946 - 20,713,692
singlet/doubletdoublet
Overlap geneNid2, 2700060E02Rik, LOC100039534, Gng2
Upstream geneUbe2e2, LOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344, LOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855
Downstream gene1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198O20.bB6Ng01-198O20.g
ACCGA020394GA020395
length8611,016
definitionB6Ng01-198O20.b B6Ng01-198O20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,712,832 - 20,713,692)(20,568,946 - 20,569,961)
sequence
gaattcttttaaatgggtctttttttaaaaagaaatttaaacttaagccc
taaggcttaaaaccagtgggaaaaaatgcagattctgctcatcctggaat
attgaagatgaccagaaacaggagagaaatgacagtgagggataactcct
tctcaaggacatcattgctgtgtctcattagctgaggcttggataatcat
atcgagtagcaaaggaggctggaaaatggatcattcagcagacagtaccc
agctagggtccaggcttcctgtaatctttgaaacagaaacgatatgggct
tgagaaatgactaagttggtaaagtgcttgccacataagcatgaagtcca
gaacctgtgtaaaaattttggctacaagggcatgcacctgtaatcccatg
actgggaggatccttaagggctcagtggccagctagcctagaagaatcag
taagtgctgttttcaataaaagactctgactcaaaaaattaagtaatgaa
cagttgacattaacctttattaacctttagcctacaaacacacacacaca
cacacacacacacacacacacacacggcacatgagcatacaaaaacatgt
aaaacacatacacataagaaaagaaatggaagccgggcgtggtggcgcat
ggctttaatcccagcacttgggaggcagaggcaggtggatttctgagttt
gaggccagcctggtctacagagtgagttccaggacagccagggctacaca
gagaaaccctgtctcaaaaaaccaaaaagcaaacaacaaacaaacaaaac
aaaaaagaaatggaaagaaaagataccattactaggaaagggtactgggg
gggggggggca
gaattctcatcactatggcccccattctgttggtgagaatacacaggcta
gcccaccttcctgggaggctgggtgattttacaagggaggaaacactagg
aaatcaggctgtggggattccgtcttggaatttggtttgccactaatttg
taggacagacctccagtcaaagttagctgctattgttatgctgaatggag
gagatgtgccgagcctgaggaagaatccatgaaggatggaagaggtgacc
ttgaacaagtcaaataatctcacatctttgagacaccattttgtcctcag
caaaatgtaaatatttggtcccaagaggaaaaatgagaaaaaaaaaatgt
gcaaacttgagtttgttttgtgtaagagcaaacatacccctctccagcta
gagggagcaaactgctgtgggccttttttgttgtgttgattcagagtctt
tcagtctggtgtcttcaagaagttttagtatttggccccatgggtcttta
agaattacatagctggataaacacaaagagaaagctctgtttgagagtcc
tatatctttaagtttttttttaaactacctttgcttctaaggagcctgtg
ggggatgggccaagccgagagaaaacggactgtacgtgggaaatttcacc
ctcctgataataaaatagtaataaaatctcatccggctcccagaggggat
gtttatgatggagggggttccccaacaccggcacagctgctttccaggtt
gtaaggttttcccatcctgcagggcagctcgggttaccgactctgtggcc
tcccgcttagggcagttcctaaactcccaggctttggggagaaacactca
gtggtctcgcccctggcgcctgacgcctcactccaggctccaactcaagg
ggtcacacaagtaaggattccacgtctgctgaagggtggtttccccaggg
aagcaacagctggggaggacatttcacagggtggcagtgtccttacatag
gttagccagcgtcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_20712832_20713692
seq2: B6Ng01-198O20.b_46_906 (reverse)

seq1  TG-CCCCCCCCCCCCAGTACCCTTTCCTAGTAATGGTATCTTTTCTTTCC  49
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCCCCCCCCCAGTACCCTTTCCTAGTAATGGTATCTTTTCTTTCC  50

seq1  ATTTCTTTTTTGTTTTGTTTGTTTGTTTGTTTGCTTTTTGGTTTTTTGAG  99
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATTTCTTTTTTGTTTTGTTTGTTTG-TTGTTTGCTTTTTGGTTTTTTGAG  99

seq1  ACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGAC  149

seq1  CAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCT  199

seq1  GGGATTAAAGCCATGCGCCACCACGCCCGGCTTCCATTTCTTTTCTTATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTAAAGCCATGCGCCACCACGCCCGGCTTCCATTTCTTTTCTTATG  249

seq1  TGTATGTGTTTTACATGTTTTTGTATGCTCATGTGCCGTGTGTGTGTGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTTTTACATGTTTTTGTATGCTCATGTGCCGTGTGTGTGTGTG  299

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTTTGTAGGCTAAAGGTTAATAAAGGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTTTGTAGGCTAAAGGTTAATAAAGGT  349

seq1  TAATGTCAACTGTTCATTACTTAATTTTTTGAGTCAGAGTCTTTTATTGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCAACTGTTCATTACTTAATTTTTTGAGTCAGAGTCTTTTATTGA  399

seq1  AAACAGCACTTACTGATTCTTCTAGGCTAGCTGGCCACTGAGCCCTTAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCACTTACTGATTCTTCTAGGCTAGCTGGCCACTGAGCCCTTAAG  449

seq1  GATCCTCCCAGTCATGGGATTACAGGTGCATGCCCTTGTAGCCAAAATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCCCAGTCATGGGATTACAGGTGCATGCCCTTGTAGCCAAAATTT  499

seq1  TTACACAGGTTCTGGACTTCATGCTTATGTGGCAAGCACTTTACCAACTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACAGGTTCTGGACTTCATGCTTATGTGGCAAGCACTTTACCAACTT  549

seq1  AGTCATTTCTCAAGCCCATATCGTTTCTGTTTCAAAGATTACAGGAAGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTTCTCAAGCCCATATCGTTTCTGTTTCAAAGATTACAGGAAGCC  599

seq1  TGGACCCTAGCTGGGTACTGTCTGCTGAATGATCCATTTTCCAGCCTCCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCCTAGCTGGGTACTGTCTGCTGAATGATCCATTTTCCAGCCTCCT  649

seq1  TTGCTACTCGATATGATTATCCAAGCCTCAGCTAATGAGACACAGCAATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTACTCGATATGATTATCCAAGCCTCAGCTAATGAGACACAGCAATG  699

seq1  ATGTCCTTGAGAAGGAGTTATCCCTCACTGTCATTTCTCTCCTGTTTCTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTTGAGAAGGAGTTATCCCTCACTGTCATTTCTCTCCTGTTTCTG  749

seq1  GTCATCTTCAATATTCCAGGATGAGCAGAATCTGCATTTTTTCCCACTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTTCAATATTCCAGGATGAGCAGAATCTGCATTTTTTCCCACTGG  799

seq1  TTTTAAGCCTTAGGGCTTAAGTTTAAATTTCTTTTTAAAAAAAGACCCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGCCTTAGGGCTTAAGTTTAAATTTCTTTTTAAAAAAAGACCCAT  849

seq1  TTAAAAGAATTC  861
      ||||||||||||
seq2  TTAAAAGAATTC  861

seq1: chr14_20568946_20569961
seq2: B6Ng01-198O20.g_68_1083

seq1  GAATTCTCATCACTATGGCCCCCATTCTGTTGGTGAGAATACACAGGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCACTATGGCCCCCATTCTGTTGGTGAGAATACACAGGCTA  50

seq1  GCCCACCTTCCTGGGAGGCTGGGTGATTTTACAAGGGAGGAAACACTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACCTTCCTGGGAGGCTGGGTGATTTTACAAGGGAGGAAACACTAGG  100

seq1  AAATCAGGCTGTGGGGATTCCGTCTTGGAATTTGGTTTGCCACTAATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGGCTGTGGGGATTCCGTCTTGGAATTTGGTTTGCCACTAATTTG  150

seq1  TAGGACAGACCTCCAGTCAAAGTTAGCTGCTATTGTTATGCTGAATGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACAGACCTCCAGTCAAAGTTAGCTGCTATTGTTATGCTGAATGGAG  200

seq1  GAGATGTGCCGAGCCTGAGGAAGAATCCATGAAGGATGGAAGAGGTGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTGCCGAGCCTGAGGAAGAATCCATGAAGGATGGAAGAGGTGACC  250

seq1  TTGAACAAGTCAAATAATCTCACATCTTTGAGACACCATTTTGTCCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAAGTCAAATAATCTCACATCTTTGAGACACCATTTTGTCCTCAG  300

seq1  CAAAATGTAAATATTTGGTCCCAAGAGGAAAAATGAGAAAAAAAAAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTAAATATTTGGTCCCAAGAGGAAAAATGAGAAAAAAAAAATGT  350

seq1  GCAAACTTGAGTTTGTTTTGTGTAAGAGCAAACATACCCCTCTCCAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTTGAGTTTGTTTTGTGTAAGAGCAAACATACCCCTCTCCAGCTA  400

seq1  GAGGGAGCAAACTGCTGTGGGCCTTTTTTGTTGTGTTGATTCAGAGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGCAAACTGCTGTGGGCCTTTTTTGTTGTGTTGATTCAGAGTCTT  450

seq1  TCAGTCTGGTGTCTTCAAGAAGTTTTAGTATTTGGCCCCATGGGTCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTGGTGTCTTCAAGAAGTTTTAGTATTTGGCCCCATGGGTCTTTA  500

seq1  AGAATTACATAGCTGGATAAACACAAAGAGAAAGCTCTGTTTGAGAGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTACATAGCTGGATAAACACAAAGAGAAAGCTCTGTTTGAGAGTCC  550

seq1  TATATCTTTAAGTTTTTTTTTAAACTACCTTTGCTTCTAAGGAGCCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTTTAAGTTTTTTTTTAAACTACCTTTGCTTCTAAGGAGCCTGTG  600

seq1  GGGGATGGGCCAAGCCGAGAGAAAACGGACTGTACGTGGGAAATTTCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGGGCCAAGCCGAGAGAAAACGGACTGTACGTGGGAAATTTCACC  650

seq1  CTCCTGATAATAAAATAGTAATAAAATCTCATCCGGCTCCCAGAGGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGATAATAAAATAGTAATAAAATCTCATCCGGCTCCCAGAGGGGAT  700

seq1  GTTTATGATGGAGGGGGTTCCCCAACACCGGCACAGCTGCTTTCCAGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGATGGAGGGGGTTCCCCAACACCGGCACAGCTGCTTTCCAGGTT  750

seq1  GTAAGG-TTTCCCATCCTGCAGGGCAGCTCGGGTTACCGACTCTGTGGCC  799
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTTTTCCCATCCTGCAGGGCAGCTCGGGTTACCGACTCTGTGGCC  800

seq1  TCCCGC-TAGGGCAGTTCCTAAACTCCCAGGCTTT-GGGAGAAACACTCA  847
      |||||| |||||||||||||||||||||||||||| ||||||||||||||
seq2  TCCCGCTTAGGGCAGTTCCTAAACTCCCAGGCTTTGGGGAGAAACACTCA  850

seq1  GTGGTTCCGCCCC-GGCGCCTGGCCGCCTCACTCCAGGCTCCAACTCAAG  896
      |||||  |||||| ||||||| | ||||||||||||||||||||||||| 
seq2  GTGGTCTCGCCCCTGGCGCCT-GACGCCTCACTCCAGGCTCCAACTCAA-  898

seq1  GGGGTCACACAAAGTAGGATTCACCGTCTGCTGAAGGGTGGTTTCCCCCA  946
      ||||||||||||   |||||||  |||||||||||||||||||| |||||
seq2  GGGGTCACACAAGTAAGGATTCCACGTCTGCTGAAGGGTGGTTT-CCCCA  947

seq1  GGGAAGGCAAACAGCTGGGGAGGACATTTCAGAGGGTGGCAGTGTCCTTA  996
      ||||||   |||||||||||||||||||||| ||||||||||||||||||
seq2  GGGAAG--CAACAGCTGGGGAGGACATTTCACAGGGTGGCAGTGTCCTTA  995

seq1  CAAAGGTTAGCCAGCG-CTTG  1016
      || ||||||||||||| ||||
seq2  CATAGGTTAGCCAGCGTCTTG  1016