BAC Information

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BAC

Clone NameB6Ng01-198P07
Chromosome14 (Build37)
Map Location 78,040,997 - 78,167,849
singlet/doubletdoublet
Overlap geneD230005D02Rik
Upstream geneLOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, LOC100043755, LOC676171, EG629678
Downstream geneGm1587, Dnajc15, Epsti1, AU021034, Tnfsf11, LOC219180, Akap11, Dgkh, LOC673649
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198P07.bB6Ng01-198P07.g
ACCGA020413GA020414
length1,131171
definitionB6Ng01-198P07.b B6Ng01-198P07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,040,997 - 78,042,137)(78,167,679 - 78,167,849)
sequence
gaattccttccttccacaagggttcctctgccttccagaatcaggccttg
atagtttctaagccttcagtgttatcagcaatttgaggacatacaagatc
aaaccagaacaactgttatatgatcatttctgtaattcatttacatttgt
gggtattgccacacacacacacaccataaaaaagaaccttaaatggcctt
agaagtagcggatgatttttagaattgccttcagcgttagccagaagttt
ctggtttgtttcctcttctattcccttgccagtacgctcatgagcattgc
tctgtttcttacgtgtttatggaaaaacaaaaaacaacagtaccgagcag
aggtcttaaaaatgaggagccttagggtgactttgtcctggtatttgttt
ctaagtttgaccctacactacacatgagtcataatttaacaatattagac
gtttcatacaagaggaaataacagcttgtagccatggtaacacgatcacc
tttaccaagccatacgacagcaattaagttagcctcttctctctgctggg
aggctaaggaagttagggtcattttttatgttcatttgtatctttaggca
tacaaacaaagaatataaacattttaagctctgttcatcttcagatccct
acactgagcatgtcttatttagggtttctgttgctctgaagagacaccat
gaccaaggcaaccctcataaagacaaacctttaattggggctgccttaca
gtttcagaggtttagtccattaccatgatagcaggaagcatggcagccta
caggcagagatggtaccaggaaggacctgagagttctgcatcttccaagg
caaccaggaaaggcaggcatcctggcattgaggaggaggaagctctcttg
tgcaatgggcagagcctgagcataggagggacctcgaaagcccaccccca
cagcaacttggcttcctctaacagggccacgcctcctaacagtacctcct
acataccccctggtgggcagcatactcaaccaccacaagagtggctttat
agatctataagttaaattgtctttagatgtattagtctatgaattctgac
gatgctaataagttcacgttgagaccactat
agatcaagaaagctctttcagcactgcctgatgggaagttctacaaatat
ccacaagtgtctacactgagggagggctactgggaagaagtgcatgattt
ttattaaggaagtaattagtcctccattatcttacatcttcagggggata
ggatttattggggtggaggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_78040997_78042137
seq2: B6Ng01-198P07.b_47_1177

seq1  GAATTCCTTCCTTCCACAAGGGTTCCTCTGCCTTCCAGAATCAGGCCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCTTCCACAAGGGTTCCTCTGCCTTCCAGAATCAGGCCTTG  50

seq1  ATAGTTTCTAAGCCTTCAGTGTTATCAGCAATTTGAGGACATACAAGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTCTAAGCCTTCAGTGTTATCAGCAATTTGAGGACATACAAGATC  100

seq1  AAACCAGAACAACTGTTATATGATCATTTCTGTAATTCATTTACATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGAACAACTGTTATATGATCATTTCTGTAATTCATTTACATTTGT  150

seq1  GGGTATTGCCACACACACACACACCATAAAAAAGAACCTTAAATGGCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTGCCACACACACACACACCATAAAAAAGAACCTTAAATGGCCTT  200

seq1  AGAAGTAGCGGATGATTTTTAGAATTGCCTTCAGCGTTAGCCAGAAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAGCGGATGATTTTTAGAATTGCCTTCAGCGTTAGCCAGAAGTTT  250

seq1  CTGGTTTGTTTCCTCTTCTATTCCCTTGCCAGTACGCTCATGAGCATTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTGTTTCCTCTTCTATTCCCTTGCCAGTACGCTCATGAGCATTGC  300

seq1  TCTGTTTCTTACGTGTTTATGGAAAAACAAAAAACAACAGTACCGAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCTTACGTGTTTATGGAAAAACAAAAAACAACAGTACCGAGCAG  350

seq1  AGGTCTTAAAAATGAGGAGCCTTAGGGTGACTTTGTCCTGGTATTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTAAAAATGAGGAGCCTTAGGGTGACTTTGTCCTGGTATTTGTTT  400

seq1  CTAAGTTTGACCCTACACTACACATGAGTCATAATTTAACAATATTAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTTGACCCTACACTACACATGAGTCATAATTTAACAATATTAGAC  450

seq1  GTTTCATACAAGAGGAAATAACAGCTTGTAGCCATGGTAACACGATCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATACAAGAGGAAATAACAGCTTGTAGCCATGGTAACACGATCACC  500

seq1  TTTACCAAGCCATACGACAGCAATTAAGTTAGCCTCTTCTCTCTGCTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCAAGCCATACGACAGCAATTAAGTTAGCCTCTTCTCTCTGCTGGG  550

seq1  AGGCTAAGGAAGTTAGGGTCATTTTTTATGTTCATTTGTATCTTTAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAAGGAAGTTAGGGTCATTTTTTATGTTCATTTGTATCTTTAGGCA  600

seq1  TACAAACAAAGAATATAAACATTTTAAGCTCTGTTCATCTTCAGATCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACAAAGAATATAAACATTTTAAGCTCTGTTCATCTTCAGATCCCT  650

seq1  ACACTGAGCATGTCTTATTTAGGGTTTCTGTTGCTCTGAAGAGACACCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAGCATGTCTTATTTAGGGTTTCTGTTGCTCTGAAGAGACACCAT  700

seq1  GACCAAGGCAACCCTCATAAAGACAAACCTTTAATTGGGGCTGCCTTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGGCAACCCTCATAAAGACAAACCTTTAATTGGGGCTGCCTTACA  750

seq1  GTTTCAGAGGTTTAGTCCATTACCATGATAGCAGGAAGCATGGCAGCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGAGGTTTAGTCCATTACCATGATAGCAGGAAGCATGGCAGCCTA  800

seq1  CAGGCAGAGATGGTACCAGGAAGGACCTGAGAGTTCTGCATCTTCCAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGAGATGGTACCAGGAAGGACCTGAGAGTTCTGCATCTTCCAAGG  850

seq1  CAACCAGGAAAGGCAGGCATCCTGGCATTGAGGAGGAGGAAGCTCTCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGGAAAGGCAGGCATCCTGGCATTGAGGAGGAGGAAGCTCTCTTG  900

seq1  TGCAATGGGCAGAGCCTGAGCATAGGAGGGGACCTCGAAAGCCCACCCCC  950
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGCAATGGGCAGAGCCTGAGCATAGGA-GGGACCTCGAAAGCCCACCCCC  949

seq1  ACAGCAACTT-GCTTCCTCTAACAAGGCCACGCCTCCTAACAGTACCTCC  999
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  ACAGCAACTTGGCTTCCTCTAACAGGGCCACGCCTCCTAACAGTACCTCC  999

seq1  TAACATACCCCCT-GTGGGCCAAGCATACTCAAACCACCAC-AGAGTGGT  1047
      | ||||||||||| ||||||  ||||||||| ||||||||| ||||||| 
seq2  T-ACATACCCCCTGGTGGGC--AGCATACTC-AACCACCACAAGAGTGGC  1045

seq1  TTTATTAGATCTAATAAAGTAAAATTTGTTCTTTAGATGTATTTAGTTCT  1097
      |||| ||||||||   |||| |||||   |||||||||||| |||| |||
seq2  TTTA-TAGATCTA--TAAGTTAAATT--GTCTTTAGATGTA-TTAG-TCT  1088

seq1  ATGAATTCTGACAAATGCTAAATTAAG-TCACG-TGAGACCACTAT  1141
      ||||||||||||  |||||||  |||| ||||| ||||||||||||
seq2  ATGAATTCTGAC-GATGCTAA--TAAGTTCACGTTGAGACCACTAT  1131

seq1: chr14_78167679_78167849
seq2: B6Ng01-198P07.g_73_243 (reverse)

seq1  TACCTCCACCCCAATAAATCCTATCCCCCTGAAGATGTAAGATAATGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCACCCCAATAAATCCTATCCCCCTGAAGATGTAAGATAATGGAG  50

seq1  GACTAATTACTTCCTTAATAAAAATCATGCACTTCTTCCCAGTAGCCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATTACTTCCTTAATAAAAATCATGCACTTCTTCCCAGTAGCCCTC  100

seq1  CCTCAGTGTAGACACTTGTGGATATTTGTAGAACTTCCCATCAGGCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTGTAGACACTTGTGGATATTTGTAGAACTTCCCATCAGGCAGTG  150

seq1  CTGAAAGAGCTTTCTTGATCT  171
      |||||||||||||||||||||
seq2  CTGAAAGAGCTTTCTTGATCT  171