BAC Information

Click to search

BAC

Clone NameB6Ng01-199F01
Chromosome14 (Build37)
Map Location 28,243,659 - 28,244,712
singlet/doubletsinglet
Overlap genenone
Upstream geneSlmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147
Downstream geneCcdc66, LOC665370, Erc2, LOC100040206
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199F01.bB6Ng01-199F01.g
ACCGA020678GA020679
length1,1211,051
definitionB6Ng01-199F01.b B6Ng01-199F01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatattggatattaatcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtatcttttgccttgcagaagctttgcagtttcat
gaggtcccatttgtcaatccaagatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtgccaatatcttcaaggcttttccccact
ttctcctttataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagatatgaatggatcaattcgca
ttcttctacatgataacaaccagttgtgccaacaccatttgttgaaaatg
ctgtctttcttccactggatggttttatctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtcactataccatgcagtttttatcacaattgctctgtag
taaagctttaggtcaggcatggtgattccaccagaggtacttttgtcctt
gagaagagtttttgctatcctaggttttttgttattccagatgaatttac
agattgctctttctaattcgttgaagaattgagttggaattttgatgggg
attgcattgaatctgtagattgcttttggcaagatagccattttttacaa
tgttgatcctgccaatccatgagcatgggagatctttccatcttcttaga
tcttctttaatttctttcttcagagacttgaagttcttatcatacagatt
ctttcacttcctaagttagagtcatgccaagatattttattattaatttt
gtgactattgagaagggtgtttgtttcccttaatttcttttttcagcctt
gtttattcttttgtgtagaagaaaagggcatgacttgtttgagtaatttt
aattccagctacttcacttaaagctgtttatacagttaaggagattcctc
gtgcttagatctttttaaggt
gaattcacttgatgtcgttaaggtgtgtatggctgtgctgatacaagaaa
agttagatactcatccccaaccgccagttggtagaaaaggtgagaagtac
ttttaagtagggcctcataatgtagtaagggcttaacagtttcaagctgt
atcaaacctttttgacatcctattttggattttaaatgactaaggctttg
aacaaatcattaaaacaagactttaaaaagggaccagaaaactggcttag
agtcctttaggattctgtttgaaaatttagtaaggtagtatgtacttctt
aaatttcataagccaaatccagaagttgctctaaaatgactgcccttgaa
catactaaaagtggcacagggaattagggagtataaaccttagctgcttt
ttccgtggagtctgatgtattccttgggggaaatgagatagtttccattt
tgcctagggatatgatttttactttctcaattgtaagggaggttgtagtt
agaaaaacatggtagggtttttttaaatttttactgaaaataattcttaa
tatcttactgtaaatcaggcagcagttgttcaaatagtacataatagggt
caaatcaaaactttacaaaaaccaaataatagaatctccttaagttgttc
agcccttcgacttgaaatgctcctgtctcagccttcctgctaggtggaat
tacaggtgatatcatgatctattaatacagcgctttcaagtaactatttt
acccatctcagattttattctaaattgggagaagttagtctttgaatttc
aattttatagttaaaaacattgtcactttagaacagttacaagagtcttt
ttccttttttttttttttttttaaagacagccttacagccttttacatag
tcctggctgccttggaactcacagagatccacctaccgttctcttcagag
tgcttgggattgaaaatagcatacagctaactgtctctgtctgtctgtct
ctctcctctctctttaaacatcacttaatggatatagtgtgccacacaga
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28243659_28244712
seq2: B6Ng01-199F01.g_65_1115

seq1  GAATTCACTTGATGTCGTTAAGGTGTGTATGGCTGTGCTGATACAAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGATGTCGTTAAGGTGTGTATGGCTGTGCTGATACAAGAAA  50

seq1  AGTTAGATACTCATCCCCAACCGCCAGTTGGTAGAAAAGGTGAGAAGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGATACTCATCCCCAACCGCCAGTTGGTAGAAAAGGTGAGAAGTAC  100

seq1  TTTTAAGTAGGGCCTCATAATGTAGTAAGGGCTTAACAGTTTCAAGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTAGGGCCTCATAATGTAGTAAGGGCTTAACAGTTTCAAGCTGT  150

seq1  ATCAAACCTTTTTGACATCCTATTTTGGATTTTAAATGACTAAGGCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACCTTTTTGACATCCTATTTTGGATTTTAAATGACTAAGGCTTTG  200

seq1  AACAAATCATTAAAACAAGACTTTAAAAAGGGACCAGAAAACTGGCTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATCATTAAAACAAGACTTTAAAAAGGGACCAGAAAACTGGCTTAG  250

seq1  AGTCCTTTAGGATTCTGTTTGAAAATTTAGTAAGGTAGTATGTACTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTTAGGATTCTGTTTGAAAATTTAGTAAGGTAGTATGTACTTCTT  300

seq1  AAATTTCATAAGCCAAATCCAGAAGTTGCTCTAAAATGACTGCCCTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCATAAGCCAAATCCAGAAGTTGCTCTAAAATGACTGCCCTTGAA  350

seq1  CATACTAAAAGTGGCACAGGGAATTAGGGAGTATAAACCTTAGCTGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTAAAAGTGGCACAGGGAATTAGGGAGTATAAACCTTAGCTGCTTT  400

seq1  TTCCGTGGAGTCTGATGTATTCCTTGGGGGAAATGAGATAGTTTCCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTGGAGTCTGATGTATTCCTTGGGGGAAATGAGATAGTTTCCATTT  450

seq1  TGCCTAGGGATATGATTTTTACTTTCTCAATTGTAAGGGAGGTTGTAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGGGATATGATTTTTACTTTCTCAATTGTAAGGGAGGTTGTAGTT  500

seq1  AGAAAAACATGGTAGGGTTTTTTTAAATTTTTACTGAAAATAATTCTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACATGGTAGGGTTTTTTTAAATTTTTACTGAAAATAATTCTTAA  550

seq1  TATCTTACTGTAAATCAGGCAGCAGTTGTTCAAATAGTACATAATAGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTACTGTAAATCAGGCAGCAGTTGTTCAAATAGTACATAATAGGGT  600

seq1  CAAATCAAAACTTTACAAAAACCAAATAATAGAATCTCCTTAAGTTGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAAAACTTTACAAAAACCAAATAATAGAATCTCCTTAAGTTGTTC  650

seq1  AGCCCTTCGACTTGAAATGCTCCTGTCTCAGCCTTCCTGCTAGGTGGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTCGACTTGAAATGCTCCTGTCTCAGCCTTCCTGCTAGGTGGAAT  700

seq1  TACAGGTGATATCATGATCTATTAATACAGCGCTTTCAAGTAACTATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTGATATCATGATCTATTAATACAGCGCTTTCAAGTAACTATTTT  750

seq1  ACCCATCTCAGATTTTATTCTAAATTGGGAGAAGTTAGTCTTTGAATTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCTCAGATTTTATTCTAAATTGGGAGAAGTTAGTCTTTGAATTTC  800

seq1  AATTTTATAGTTAAAAACATTGTCACTTTAGAACAGTTACAAGAGTCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATAGTTAAAAACATTGTCACTTTAGAACAGTTACAAGAGTCTTT  850

seq1  TTCC-TTTTTTTTTTTTTTTTTAAAGACAGCCTTACAGCCTTTTACATAG  899
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTTTTTTTTTTTTTTAAAGACAGCCTTACAGCCTTTTACATAG  900

seq1  TCCTGGCTGCCTTGGAACTCACAGAGATCCACCTACCGTTCTCTTCAGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCTGCCTTGGAACTCACAGAGATCCACCTACCGTTCTCTTCAGAG  950

seq1  TGC-TGGGATTGAAAATAAGCAATACCAGCCTTACCTGTCTCTGTCTGTC  998
      ||| ||||||||||||| ||| ||| ||||  || |||||||||||||||
seq2  TGCTTGGGATTGAAAAT-AGC-ATA-CAGC--TAACTGTCTCTGTCTGTC  995

seq1  TGTCTCTCT-CTCTCTCTTTAAACATCACTTAATTGGATATAGTGTGCAA  1047
      ||||||||| ||||||||||||||||||||||| |||||||||||||| |
seq2  TGTCTCTCTCCTCTCTCTTTAAACATCACTTAA-TGGATATAGTGTGCCA  1044

seq1  CACAGAA  1054
      |||||||
seq2  CACAGAA  1051