BAC Information

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BAC

Clone NameB6Ng01-200E14
Chromosome14 (Build37)
Map Location 3,825,472 - 3,826,565
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040452, LOC100040657, LOC100040671, LOC100040682, LOC100040697, LOC544990, D830030K20Rik, LOC236565, LOC100040740, LOC100040755, LOC100040767, LOC100040779, LOC100038846, EG666890, LOC100040544, LOC100040797, LOC100040555, LOC100040565, LOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621
Downstream geneLOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200E14.bB6Ng01-200E14.g
ACCGA021392GA021393
length1,1241,107
definitionB6Ng01-200E14.b B6Ng01-200E14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttctgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aattttgcaaattgctccttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatcttttccatc
ttctgagatcttctttaaatttctttcttcagagacttgaaagtttttta
ttcatacagatctttcatctttcctttagttagagtcacgccgaggataa
ttttatattatttgtgactattgaagacgggtggtggtttccctaatttc
ttttctcagcctgtttatttcttgtggtaaagaaaggccattgacttggt
tgagtaattttatacccagctacttcatcgaagtctggttttatcaggtt
taggtagttctctttgggtgggca
gaattcactcggacaaccggatccttctacggcaaagcttttattgcttc
aacataaggaagaccccgaacccagaaaatggtgctgcttatatagcccg
cagcgtgacggttcagcacctgatgtggcgtgacagcacctgattagttg
ctcgcccatcaccccattactacgtcccgagatgggcagtgactgggcgt
gaatttactcttgcacttgcgcataaggcttgtttactagttaggctcag
tggaagccggcgccatcttataatggcgattgctaatggcacggctctcc
acatttccccctttttattttattaaaatttgaggctggtctaggcctct
gcagtcatgtccatctgctgtggttactgtcttaggtcattcctccaatg
tcacagcctttcctgtcataggttaaccctatcaccaccgggtcccatgt
cttaggttggtctgtacatgaggaaagttgcccatctctggataagaagt
tagactcagccgggcatggtggtgcacacttttaatcccagcactggaga
ggcagaggcaggccgatttctgagttggaggccagcctggtctacaaatt
gagttccaggacagccagaggtatatagaaaaaccctgtctcgaaaccac
aaccaccaccccaaaagaagaagttagactccagaaaaccaaagaacccc
attaaaaatggggtacagagctaaacaataattctcaactgaggaatact
gaatggctgagacacctaaaaaatgttcaacatccttaatcatcagggaa
atgcaaatcaaaacaaccgtagattccacctcaggtcagaatggctaaga
tcaaaatttcagttgacagcagatgctggcaaggttgtggagaaagagga
acactccttccattgtttggtgggattgcaggcttgtacaaccacctctg
gaaatcaggtttggtagttcctcagaaaattggacaatagtactaccaga
aggatccggcaatataactcctgggcataatacccagaagaacgctccat
ctggtaacaaaggtcacacatgctccacttatgtttcatagcagccttat
ttataat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_3825472_3826565
seq2: B6Ng01-200E14.g_68_1174

seq1  GAATTCACTCGGACAACCAGATCCTTCTACGGCAAAGCTTTTATTGCTTC  50
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAATTCACTCGGACAACCGGATCCTTCTACGGCAAAGCTTTTATTGCTTC  50

seq1  AACATAAGGAAGACCCCGAACCCAGAAAATGGTGCTGCTTATATAGCCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAGGAAGACCCCGAACCCAGAAAATGGTGCTGCTTATATAGCCCG  100

seq1  CAGCGTGACGGTTCAGCACCTGATGTGGCGTGACAGCACCTGATTAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTGACGGTTCAGCACCTGATGTGGCGTGACAGCACCTGATTAGTTG  150

seq1  CTCGCCCATCACCCCATTACTACGTCCCGAGATGGGCAGTGACTGGGCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCCCATCACCCCATTACTACGTCCCGAGATGGGCAGTGACTGGGCGT  200

seq1  GAATTTACTCTTGCACTTGCGCATAAGGCTTGTTTACTAGTTAGGCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTACTCTTGCACTTGCGCATAAGGCTTGTTTACTAGTTAGGCTCAG  250

seq1  TGGAAGCCGGCGCCATCTTATAATGGCGATTGCTAATGGCACGGCTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCCGGCGCCATCTTATAATGGCGATTGCTAATGGCACGGCTCTCC  300

seq1  ACATTTCCCCCTTTTTATTTTATTAAAATTTGAGGCTGGTCTAGGCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCCCCTTTTTATTTTATTAAAATTTGAGGCTGGTCTAGGCCTCT  350

seq1  GCAGTCATGTCCATCTGCTGTGGTTACTGTCTTAGGTCATTCCTCCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCATGTCCATCTGCTGTGGTTACTGTCTTAGGTCATTCCTCCAATG  400

seq1  TCACAGCCTTTCCTGTCATAGGTTAACCCTATCACCACCGGGTCCCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCCTTTCCTGTCATAGGTTAACCCTATCACCACCGGGTCCCATGT  450

seq1  CTTAGGTTGGTCTGTACATGAGGAAAGTTGCCCATCTCTGGATAAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTTGGTCTGTACATGAGGAAAGTTGCCCATCTCTGGATAAGAAGT  500

seq1  TAGACTCAGCCGGGCATGGTGGTGCACACTTTTAATCCCAGCACTGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCAGCCGGGCATGGTGGTGCACACTTTTAATCCCAGCACTGGAGA  550

seq1  GGCAGAGGCAGGCCGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCAGGCCGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAAATT  600

seq1  GAGTTCCAGGACAGCCAGAGCTATATAGAAAAACCCTGTCTCGAAACCAC  650
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAGTTCCAGGACAGCCAGAGGTATATAGAAAAACCCTGTCTCGAAACCAC  650

seq1  CACCACCACCCCAAAAGAAGAAGTTAGACTCCAGAAAACCAAAGAACCCC  700
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCACCCCAAAAGAAGAAGTTAGACTCCAGAAAACCAAAGAACCCC  700

seq1  ATTAAAAAAGGGGTACAGAGCTAAACAATAATTCTCAACTGAGGAATACT  750
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAATGGGGTACAGAGCTAAACAATAATTCTCAACTGAGGAATACT  750

seq1  GAATGGCTGAGACACCTAAAAAATGTTCAACATCCTTAATCATCAGGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCTGAGACACCTAAAAAATGTTCAACATCCTTAATCATCAGGGAA  800

seq1  ATGCAAATCAAAACAACCGTAGATTCCACCTCAGGTCAGAATGGCTAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATCAAAACAACCGTAGATTCCACCTCAGGTCAGAATGGCTAAGA  850

seq1  TCAAAATTTCAGTTGACAGCAGATGCTGGCAAGGTTGTGGAGAAAGAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATTTCAGTTGACAGCAGATGCTGGCAAGGTTGTGGAGAAAGAGGA  900

seq1  ACACTCC-TCCATTG-TTGGTGGGATTGCAAGCTTGTACAACCA-CTCTG  947
      ||||||| ||||||| |||||||||||||| ||||||||||||| |||||
seq2  ACACTCCTTCCATTGTTTGGTGGGATTGCAGGCTTGTACAACCACCTCTG  950

seq1  GAAATCA-GTTTGGTAGTTCCTCAGAAAATTGGAC-ATAGTACTACCA-A  994
      ||||||| ||||||||||||||||||||||||||| |||||||||||| |
seq2  GAAATCAGGTTTGGTAGTTCCTCAGAAAATTGGACAATAGTACTACCAGA  1000

seq1  AGGATCCAGCAATATTACTCCTGGGCAT-ATACCCAGAAG-ACGCTCCAA  1042
      ||||||| ||||||| |||||||||||| ||||||||||| |||||||| 
seq2  AGGATCCGGCAATATAACTCCTGGGCATAATACCCAGAAGAACGCTCCAT  1050

seq1  CTTGTAAC-AAGGT--CACATGCTCCAC-TATG-TTCATAGCAGCCTTAT  1087
      || ||||| |||||  |||||||||||| |||| ||||||||||||||||
seq2  CTGGTAACAAAGGTCACACATGCTCCACTTATGTTTCATAGCAGCCTTAT  1100

seq1  TTATAAT  1094
      |||||||
seq2  TTATAAT  1107