BAC Information

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BAC

Clone NameB6Ng01-201K06
Chromosome14 (Build37)
Map Location 98,343,918 - 98,345,031
singlet/doubletsinglet
Overlap geneDach1
Upstream geneLOC668654, EG668659
Downstream geneLOC635593, LOC619716
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201K06.bB6Ng01-201K06.g
ACCGA022359GA022360
length7191,108
definitionB6Ng01-201K06.b B6Ng01-201K06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactattgttggatttccccttcgatgagcccgaagtgatctttc
ctagctcttgaatttagttctgtcagacagtaaactgactacactggcac
gctttttgtgtttatttgcttggaatatcttttctatcattttatcctga
ggtgatgtctatcctttatgttcatgtgtatttattggatacaatgaaag
aatgtgccctattttcgaatctagtgtgacagtctgtatctttttattag
tgaattgagaccaatgaggttgacagttattaagagtaatgtttattgat
tcccactattttgttgttgtggtggtggtgtttcgttgttgttgctgttg
tttgtttaattgttttattgtgtttagttttattgaggttgaagtttttc
ttcaagtaccaatggtagagttggatttatagataaacactgcttaaatt
tggttttaccatggattatcattctttctctgcccaaaattattgaaaat
tttgctaggtagagttttctagcatattatctgcagtctcttagattttt
cagaatatccatttggacctttctggattttggagactcccactgaaaaa
tcagatattattctaatagctctgttttttatggtttttggtcttcttcc
tttgtagattttcatattatttcttttgtttctgtaaatttagcatttag
atttattatgtgatgtggg

gaattccttagcttaggttgttggcattctgtggtgttccttattttcct
aaaacaaatgctgaggtgacgcctggctcagtcagtcaatgcacacattt
agcacaccccaggagggaagctgtgtggtgaacccagtagattttagagc
tcagaaaggcttcacaccctgtggtgccagcacacttctttcactgggaa
gtttgtcattaaaatatagccctcttacagtgacttcaaactagcttgat
ttgaattgtttttagttacaatgcagcacgaggaatattttcagtttgga
aaaaagaaaaaggaagaaagaaagaaaaaaagaaaagaaaagaaaagaat
ccataaggattattttattttgatagatacaatctatccatgtagtatat
ataactacactgtatctgtgtacttatgtgtagctatatatttataaaaa
taatcaaaactcacttatagatgaaaatgtataaaagaaaatctgatgtt
aactttctagcaactgaaatattcaaacaaatagataagagtggctatgc
attaaaagaaaacacatgatgaagcaaagtatagcttattaattatgagg
cattcaaatcatttttcgcattatagaatcatgttccccatgaaaacatt
gtgtattttattattaactcacagcatatgatcttcatttctgcctccct
caatttcgtccccctgggatggaacaacgtagactcacacatttattata
ttaattagaaatcactacctaatataattattctggcaagcacatggtga
gtcctgaaatattattgacagaatttctctatttaactctggtgttaaaa
agatttgcatgtctaaaactgccttgattagatattgtttttgacgactc
tgcgtggtgtttttcctcgatgcacattaagcacgaggacttttagcacg
tctgaagtaacatctgctcgtcttttgtgcaggttcatggtataattagc
tctatatttcaggcaaatacaattttgctcccatgagacaagcagcatga
agaaaacataattatgcagatagagaaacctgaagtcaagtggggtggta
gatggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_98343918_98345031
seq2: B6Ng01-201K06.g_64_1171 (reverse)

seq1  AAGCCATCTA-CACCCACTTTGACTTC-TGTTTCTCTAATCTGCAATTAT  48
      |||||||||| |||||   ||||||||  |||||||| |||||||  || 
seq2  AAGCCATCTACCACCCCACTTGACTTCAGGTTTCTCT-ATCTGCA--TAA  47

seq1  TTATGTTTTCTTCATGCTGCTTTGTCCTCCATGGGAGCAAAATTGTATTT  98
      |||||||||||||||||||| |||||   |||||||||||||||||||||
seq2  TTATGTTTTCTTCATGCTGC-TTGTC--TCATGGGAGCAAAATTGTATTT  94

seq1  G-CTGAAATATAGAGCTAATTATACCATGAACCCTGCAACAAAAAGACGG  147
      | ||||||||||||||||||||||||||||| ||||||   ||||||| |
seq2  GCCTGAAATATAGAGCTAATTATACCATGAA-CCTGCA--CAAAAGAC-G  140

seq1  AGCAGATGTTACTTCAGACGTGCTAAAAGTCCTCGTGCTTAATGTGCATC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATGTTACTTCAGACGTGCTAAAAGTCCTCGTGCTTAATGTGCATC  190

seq1  GAGG-AAAACACCACGCAGAGTCGTCAAAAACAATATCTAATCAAGGCAG  246
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAAACACCACGCAGAGTCGTCAAAAACAATATCTAATCAAGGCAG  240

seq1  TTTTAGACATGCAAATCTTTTTAACACCAGAGTTAAATAGAGAAATTCTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGACATGCAAATCTTTTTAACACCAGAGTTAAATAGAGAAATTCTG  290

seq1  TCAATAATATTTCAGGACTCACCATGTGCTTGCCAGAATAATTATATTAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATATTTCAGGACTCACCATGTGCTTGCCAGAATAATTATATTAG  340

seq1  GTAGTGATTTCTAATTAATATAATAAATGTGTGAGTCTACGTTGTTCCAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGATTTCTAATTAATATAATAAATGTGTGAGTCTACGTTGTTCCAT  390

seq1  CCCAGGGGGACGAAATTGAGGGAGGCAGAAATGAAGATCATATGCTGTGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGGGACGAAATTGAGGGAGGCAGAAATGAAGATCATATGCTGTGA  440

seq1  GTTAATAATAAAATACACAATGTTTTCATGGGGAACATGATTCTATAATG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATAATAAAATACACAATGTTTTCATGGGGAACATGATTCTATAATG  490

seq1  CGAAAAATGATTTGAATGCCTCATAATTAATAAGCTATACTTTGCTTCAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAATGATTTGAATGCCTCATAATTAATAAGCTATACTTTGCTTCAT  540

seq1  CATGTGTTTTCTTTTAATGCATAGCCACTCTTATCTATTTGTTTGAATAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTTTTCTTTTAATGCATAGCCACTCTTATCTATTTGTTTGAATAT  590

seq1  TTCAGTTGCTAGAAAGTTAACATCAGATTTTCTTTTATACATTTTCATCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTGCTAGAAAGTTAACATCAGATTTTCTTTTATACATTTTCATCT  640

seq1  ATAAGTGAGTTTTGATTATTTTTATAAATATATAGCTACACATAAGTACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGAGTTTTGATTATTTTTATAAATATATAGCTACACATAAGTACA  690

seq1  CAGATACAGTGTAGTTATATATACTACATGGATAGATTGTATCTATCAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACAGTGTAGTTATATATACTACATGGATAGATTGTATCTATCAAA  740

seq1  ATAAAATAATCCTTATGGATTCTTTTCTTTTCTTTTCTTTTTTTCTTTCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAATCCTTATGGATTCTTTTCTTTTCTTTTCTTTTTTTCTTTCT  790

seq1  TTCTTCCTTTTTCTTTTTTCCAAACTGAAAATATTCCTCGTGCTGCATTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTTTTTCTTTTTTCCAAACTGAAAATATTCCTCGTGCTGCATTG  840

seq1  TAACTAAAAACAATTCAAATCAAGCTAGTTTGAAGTCACTGTAAGAGGGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAAAACAATTCAAATCAAGCTAGTTTGAAGTCACTGTAAGAGGGC  890

seq1  TATATTTTAATGACAAACTTCCCAGTGAAAGAAGTGTGCTGGCACCACAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTAATGACAAACTTCCCAGTGAAAGAAGTGTGCTGGCACCACAG  940

seq1  GGTGTGAAGCCTTTCTGAGCTCTAAAATCTACTGGGTTCACCACACAGCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGAAGCCTTTCTGAGCTCTAAAATCTACTGGGTTCACCACACAGCT  990

seq1  TCCCTCCTGGGGTGTGCTAAATGTGTGCATTGACTGACTGAGCCAGGCGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCTGGGGTGTGCTAAATGTGTGCATTGACTGACTGAGCCAGGCGT  1040

seq1  CACCTCAGCATTTGTTTTAGGAAAATAAGGAACACCACAGAATGCCAACA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCAGCATTTGTTTTAGGAAAATAAGGAACACCACAGAATGCCAACA  1090

seq1  ACCTAAGCTAAGGAATTC  1114
      ||||||||||||||||||
seq2  ACCTAAGCTAAGGAATTC  1108


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