BAC Information

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BAC

Clone NameB6Ng01-201N11
Chromosome14 (Build37)
Map Location 29,246,002 - 29,247,109
singlet/doubletsinglet
Overlap geneErc2
Upstream geneCcdc66, LOC665370, LOC100040206
Downstream geneWnt5a, LOC100040218, Cacna2d3, Lrtm1, Ppia-ps15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201N11.bB6Ng01-201N11.g
ACCGA022501GA022502
length1,1611,107
definitionB6Ng01-201N11.b B6Ng01-201N11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcagacttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatcttcacccta
taggtggaacaacatatgaactaaccagtaccctgagctctgacttctta
gctgcatatggtatcaaagattgcctagtcggcatccactgtaagagagt
ccatgaaccgccgactttggtgcccggtacagggacgcaaggcccaaagg
gggggaagtgg
gaattccatggtgaagcggtacttgcatttcaatctgaggggtaaattgg
agttgagtaagtaatgtggtgacattctagacagaaggaacagcaggtgc
ccaggcctagcaaatggatgtcttcgtgaacacagcagtacagagtggag
agcggttggcaaggccacacgaggtattaagtagagtcctctgatcttct
ccaagatgcacattgtgcttatgctatatggctctgggctggaagttacc
tttagagcacaccaagttatagcaagctgtttggctttccgtggtagcag
agctgacttcaaacataaataacctcccctggggaaaccaggagaaacaa
aatatagactccattgcatgcagagaagcctggaagggcaagactagcta
gaatgggctacaggctggaggggcagcatccaaggtacgtgacagggttg
gagggtccttctcaatggctgctcgcattctttggtgcatgtctgtccac
actgttggtccacagatggctaccttaactttgctcacactgcccactgc
tgtgtcaggatgcccactgtgttagcatgccacgtacctcttcctatccc
caactctgcttgctatttgcaactgttactacctgctaccttctagaccc
tcagttgtatgtcaaaagaactttttatcctcttctcaccgaagccacca
tgtcttcctttatattattattacttgaacatatatttcatatttttaag
tcagggttttttctgtgtagtcctggctgtcctggaactccctttataga
tcacactggccttgaactcatagagatctacctgcttctgcctcctgagt
acagtcattaaatgtgtgtaccactagtgtccagttcatatctcctaaaa
gggtacaaacgtgggcatatgaatgtatacaactggggccctcatggtag
acctaggatggtgctggttgcagcagacagacgggttttgttcgatgtgc
ccataggcttcgcttccagttcagtagtatgactttctatagtttgttgg
caatttaaaagaaaaaatcagcccccaaattcaaagaacagtggagaagt
cttcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_29246002_29247109
seq2: B6Ng01-201N11.g_66_1172

seq1  GAATTCCATGGTGAAGCGGTACTTGCATTTCAATCTGAGGGGTAAATTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGTGAAGCGGTACTTGCATTTCAATCTGAGGGGTAAATTGG  50

seq1  AGTTGAGTAAGTAATGTGGTGACATTCTAGACAGAAGGAACAGCAGGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAGTAAGTAATGTGGTGACATTCTAGACAGAAGGAACAGCAGGTGC  100

seq1  CCAGGCCTAGCAAATGGATGTCTTCGTGAACACAGCAGTACAGAGTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCTAGCAAATGGATGTCTTCGTGAACACAGCAGTACAGAGTGGAG  150

seq1  AGCGGTTGGCAAGGCCACACGAGGTATTAAGTAGAGTCCTCTGATCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGTTGGCAAGGCCACACGAGGTATTAAGTAGAGTCCTCTGATCTTCT  200

seq1  CCAAGATGCACATTGTGCTTATGCTATATGGCTCTGGGCTGGAAGTTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATGCACATTGTGCTTATGCTATATGGCTCTGGGCTGGAAGTTACC  250

seq1  TTTAGAGCACACCAAGTTATAGCAAGCTGTTTGGCTTTCCGTGGTAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGCACACCAAGTTATAGCAAGCTGTTTGGCTTTCCGTGGTAGCAG  300

seq1  AGCTGACTTCAAACATAAATAACCTCCCCTGGGGAAACCAGGAGAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACTTCAAACATAAATAACCTCCCCTGGGGAAACCAGGAGAAACAA  350

seq1  AATATAGACTCCATTGCATGCAGAGAAGCCTGGAAGGGCAAGACTAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGACTCCATTGCATGCAGAGAAGCCTGGAAGGGCAAGACTAGCTA  400

seq1  GAATGGGCTACAGGCTGGAGGGGCAGCATCCAAGGTACGTGACAGGGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGCTACAGGCTGGAGGGGCAGCATCCAAGGTACGTGACAGGGTTG  450

seq1  GAGGGTCCTTCTCAATGGCTGCTCGCATTCTTTGGTGCATGTCTGTCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTCCTTCTCAATGGCTGCTCGCATTCTTTGGTGCATGTCTGTCCAC  500

seq1  ACTGTTGGTCCACAGATGGCTACCTTAACTTTGCTCACACTGCCCACTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGGTCCACAGATGGCTACCTTAACTTTGCTCACACTGCCCACTGC  550

seq1  TGTGTCAGGATGCCCACTGTGTTAGCATGCCACGTACCTCTTCCTATCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAGGATGCCCACTGTGTTAGCATGCCACGTACCTCTTCCTATCCC  600

seq1  CAACTCTGCTTGCTATTTGCAACTGTTACTACCTGCTACCTTCTAGACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTGCTTGCTATTTGCAACTGTTACTACCTGCTACCTTCTAGACCC  650

seq1  TCAGTTGTATGTCAAAAGAACTTTTTATCCTCTTCTCACCGAAGCCACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGTATGTCAAAAGAACTTTTTATCCTCTTCTCACCGAAGCCACCA  700

seq1  TGTCTTCCTTTATATTATTATTACTTGAACATATATTTCATATTTTTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCCTTTATATTATTATTACTTGAACATATATTTCATATTTTTAAG  750

seq1  TCAGGGTTTTTTCTGTGTAGTCCTGGCTGTCCTGGAACTCCCTTTATAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTTTTTTCTGTGTAGTCCTGGCTGTCCTGGAACTCCCTTTATAGA  800

seq1  TCACACTGGCCTTGAACTCATAGAGATCTACCTGCTTCTGCCTCCTGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTGGCCTTGAACTCATAGAGATCTACCTGCTTCTGCCTCCTGAGT  850

seq1  ACAGTCATTAAATGTGTGTACCACTAGTGTCCAGTTCATATCTCCTAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCATTAAATGTGTGTACCACTAGTGTCCAGTTCATATCTCCTAAAA  900

seq1  GGGTACAAACGTGGGCATATGAATGTATACAACTGGGGCCCTCATGGTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACAAACGTGGGCATATGAATGTATACAACTGGGGCCCTCATGGTAG  950

seq1  ACCTAGGATGGTGCTGGGTTGCAGCAGACAGACGGGTTTTGTTCGATGTT  1000
      ||||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  ACCTAGGATGGTGCT-GGTTGCAGCAGACAGACGGGTTTTGTTCGATG-T  998

seq1  GCCCATAGGCTTCGCTTCCAGTTCAGTAGTTATGACTTTCTATTAGTTTG  1050
      ||||||||||||||||||||||||||||| |||||||||||| |||||||
seq2  GCCCATAGGCTTCGCTTCCAGTTCAGTAG-TATGACTTTCTA-TAGTTTG  1046

seq1  GTTGCAA-ATAAAAG-AAAATCCAGCCCCCAAATCCAAAG-ACAGGTGAG  1097
       | ||||  |||||| ||||  |||||||||||| ||||| ||||  |||
seq2  TTGGCAATTTAAAAGAAAAAATCAGCCCCCAAATTCAAAGAACAGTGGAG  1096

seq1  GAGTCTTCATG  1108
       ||||||||||
seq2  AAGTCTTCATG  1107