BAC Information

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BAC

Clone NameB6Ng01-202B15
Chromosome14 (Build37)
Map Location 108,579,740 - 108,580,895
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668752, EG668754, LOC668757
Downstream geneEG668761, Slitrk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202B15.bB6Ng01-202B15.g
ACCGA022689GA022690
length1,1701,150
definitionB6Ng01-202B15.b B6Ng01-202B15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaaactgataaacaacttcaggaaaataactggatataaaat
tcattcaaacaaatcagcggcatttctttacagaaaggataaacaggctg
agaaagaaattagggaaacagcacccttcacaatagtcacaaataataaa
atatctaggtatgactgtaactaagcaattgaaagatctgtatgataaga
agtttaaggctctgaagaaataatttgaagaagaccttagaagatggaaa
gatcacccatgctcatggattggcagggttaatatagtaaaattggctat
cttgccgaaagcaatctacagactcaatgcaatcttcatcagaattccaa
ctcttcacagatttagaaagagcaatttgcaaattcatctggaataacaa
aaaacctagggataaaattaactatttttaacaataaaagaacttttggt
ggaatcaccatccctgacctcaagctgtactacagagcaattgtgataaa
aactgcatagttctggtacagtgccagataggtagatcaatgcaatagaa
ttgaagacctagaaatgaactcacacatctatggtcacttgatctttgac
aaaggagttaaaaccatccagtggttaaaacaaaaaaaaaaaaaaaaaaa
acaaacaaaaaaaaaacaaaaaacaacaacaacaacaaaaaaaaaaaaaa
acaagacagtattttcaacaaatggtgctggctcaactggcaattagcat
gtagaagaatgtgaatagatccattcttatctccttgtacaaagctcaag
tctaagtggatcaaggacctccacatactaccagagacactcaaacttat
agagcagaattagggaagaatctcgaacatatgggcacaggggaaaaatt
ccttgaacagaacaccaatggtttgtgttgtaaaatcaagaattgacaaa
tgggaactcacaaaatgcaaatcctgtaaacaaggacattatcatagaat
aaagcacagaagatgtatatatcatttcatctcatcacagaagtctatat
gcactattacaattacaggagtagactcgaaggagattacgcttataaat
gggacctgataaagaattcccactgagatcatgcaagagacctagacttc
acggcttagttatcagcatg

gaattcttttgctggctcctaagaaacaaagggctgtggtcatggcatac
agattcacagaaagtgagtcagcaaaatgtaatggcaattctttaggctt
cttttttcccctagcaagaactgagttgtctggagatctctgaagagcaa
acacggctcttcaagaattttttctaacaggatttatgattttggttgga
acatccatggaaagcaaacagagctctttttagaatatttcatagatctt
ttagaatttttttataagaggatttctgattatagtcagaaatctgaaga
attagttacagagccaacacatttcttttaaaacaaaaacctatgagcta
tctgaggactttttgaatttttactaccagagaaatttgtctcaaccaga
tagttttctagaatagcaagaaaaagcagagcagaagagcagaacacaca
cacacacacacacacacacacacacacacacacacacacacacacataca
cacacacacacaaacacacacggagaaagagagagagagagagagagaga
aggagagggagagggagagagagatatctgaaaagctgtcttgagaagat
tacagagccaagagctatctgcagagagttgttcagggagccatctccag
cagaacataggccgatgatttgacattgagttgtttcctctggtcctaga
caccccttctctcagaacctctctccaagacaattctggtccttggctgg
aatgagtccttagcttccctgattttaagagtacatggacatgaaagaaa
gcatttaattggaatgtgtgttcataatttcagagatttgctttaccatc
atcatagcaaggagaataacaggatgcaggcagaatgaagccgtagctga
gaacagagcaatggagaatgtgtgattatttattgggactggattgggct
tttgtagccacaacgccctagagacatatttttccagcaaggccaatact
ttcctaatcttctaacctatgaaaagattttcactttcattcaattcttg
gtaaagaaggcattcaaatatgtgagtctatggaggattattctattgaa
ttgacacatctagttccaatccatagggtgtggtacctatttcatatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_108579740_108580895
seq2: B6Ng01-202B15.g_65_1214

seq1  GAATTCTTTTGCTGGCTCCTAAGAAACAAAGGGCTGTGGTCATGGCATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGCTGGCTCCTAAGAAACAAAGGGCTGTGGTCATGGCATAC  50

seq1  AGATTCACAGAAAGTGAGTCAGCAAAATGTAATGGCAATTCTTTAGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCACAGAAAGTGAGTCAGCAAAATGTAATGGCAATTCTTTAGGCTT  100

seq1  CTTTTTTCCCCTAGCAAGAACTGAGTTGTCTGGAGATCTCTGAAGAGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTCCCCTAGCAAGAACTGAGTTGTCTGGAGATCTCTGAAGAGCAA  150

seq1  ACACGGCTCTTCAAGAATTTTTTCTAACAGGATTTATGATTTTGGTTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGGCTCTTCAAGAATTTTTTCTAACAGGATTTATGATTTTGGTTGGA  200

seq1  ACATCCATGGAAAGCAAACAGAGCTCTTTTTAGAATATTTCATAGATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCATGGAAAGCAAACAGAGCTCTTTTTAGAATATTTCATAGATCTT  250

seq1  TTAGAATTTTTTTATAAGAGGATTTCTGATTATAGTCAGAAATCTGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTTTTTTATAAGAGGATTTCTGATTATAGTCAGAAATCTGAAGA  300

seq1  ATTAGTTACAGAGCCAACACATTTCTTTTAAAACAAAAACCTATGAGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTACAGAGCCAACACATTTCTTTTAAAACAAAAACCTATGAGCTA  350

seq1  TCTGAGGACTTTTTGAATTTTTACTACCAGAGAAATTTGTCTCAACCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGACTTTTTGAATTTTTACTACCAGAGAAATTTGTCTCAACCAGA  400

seq1  TAGTTTTCTAGAATAGCAAGAAAAAGCAGAGCAGAAGAGCAGAACACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTCTAGAATAGCAAGAAAAAGCAGAGCAGAAGAGCAGAACACACA  450

seq1  CACACACACACACACACACACACACACACACACACACACACACACATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACACACATACA  500

seq1  CACACACACACAAACACACACGGAGAAAGAGAGAGAGAGAGAGAGAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACAAACACACACGGAGAAAGAGAGAGAGAGAGAGAGAGAGA  550

seq1  AGGAGAGGGAGAGGGAGAGAGAGATATCTGAAAAGCTGTCTTGAGAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGGAGAGGGAGAGAGAGATATCTGAAAAGCTGTCTTGAGAAGAT  600

seq1  TACAGAGCCAAGAGCTATCTGCAGAGAGTTGTTCAGGGAGCCATCTCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGCCAAGAGCTATCTGCAGAGAGTTGTTCAGGGAGCCATCTCCAG  650

seq1  CAGAACATAGGCCGATGATTTGACATTGAGTTGTTTCCTCTGGTCCTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACATAGGCCGATGATTTGACATTGAGTTGTTTCCTCTGGTCCTAGA  700

seq1  CACCCCTTCTCTCAGAACCTCTCTCCAAGACAATTCTGGTCCTTGGCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTTCTCTCAGAACCTCTCTCCAAGACAATTCTGGTCCTTGGCTGG  750

seq1  AATGAGTCCTTAGCTTCCCTGATTTTAAGAGTACATGGACATGAAAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTCCTTAGCTTCCCTGATTTTAAGAGTACATGGACATGAAAGAAA  800

seq1  GCATTTAATTGGAATGTGTGTTCATAATTTCAGAGATTTGCTTTACCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAATTGGAATGTGTGTTCATAATTTCAGAGATTTGCTTTACCATC  850

seq1  ATCATAGCAAGGAGAATAACAGGATGCAGGCAGAATGAAGCCGTAGCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGCAAGGAGAATAACAGGATGCAGGCAGAATGAAGCCGTAGCTGA  900

seq1  GAACAGAGCAATGGAGAATGTGTGA-TATTTATTGGGACTGGATTGGGCT  949
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAACAGAGCAATGGAGAATGTGTGATTATTTATTGGGACTGGATTGGGCT  950

seq1  TTTGTAGCCACAACGCCCTAGAGACATAATTTTTCCAGCAAGGCCAATAC  999
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTTGTAGCCACAACGCCCTAGAGACAT-ATTTTTCCAGCAAGGCCAATAC  999

seq1  -TTCCTAATCCTTCTAAACCTATG-AAAGAATTTCACTTTCATTTCAATT  1047
       |||||||| ||||| |||||||| ||||| ||||||||||| |||||||
seq2  TTTCCTAAT-CTTCT-AACCTATGAAAAGATTTTCACTTTCA-TTCAATT  1046

seq1  CTTGGTAAAGAA-GCATTCAAATATGTGAGTCTATGGAGGAATTATTCTT  1096
      |||||||||||| ||||||||||||||||||||||||||| ||||||| |
seq2  CTTGGTAAAGAAGGCATTCAAATATGTGAGTCTATGGAGG-ATTATTC-T  1094

seq1  ATTTAAATGACCACATTCTAGTTCCTATCCCCATA-GGTGTGGTAACTAT  1145
      ||| || ||| |||| ||||||||| ||  ||||| ||||||||| ||||
seq2  ATTGAATTGA-CACA-TCTAGTTCCAAT--CCATAGGGTGTGGTACCTAT  1140

seq1  TTCATAATGCA  1156
      ||||| |||||
seq2  TTCAT-ATGCA  1150


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