BAC Information

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BAC

Clone NameB6Ng01-202E12
Chromosome14 (Build37)
Map Location 51,366,677 - 51,513,161
singlet/doubletdoublet
Overlap geneTtc5, Gm288, Rpph1, Parp2, Tep1, EG546611
Upstream gene3632451O06Rik, LOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749
Downstream geneOsgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202E12.bB6Ng01-202E12.g
ACCGA022819GA022820
length8381,023
definitionB6Ng01-202E12.b B6Ng01-202E12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,366,677 - 51,367,509)(51,512,138 - 51,513,161)
sequence
gaattctttgtttagctctgtaccccatttttaaacagggttatttggtt
ctttggagtctaacttcttgagttctttgtatatattggatattagtcct
ctataggatgtggggttggtaaggagttttctttaataggctggccactg
ggagtttgactgtgcaccagtgagtatatgggcaacacaaaattgaactt
ggttttctttagtcatcttatttcttcttttccttctgcttctgcttctc
ctcctcctcctcctcctcctcctttcttcttcctcttcttctcctcttcc
tccttctttctcctcattcctcctcctcctcctcttccttcttcttctag
gctggaagatcacaaggacagtggatctgggaataataggaagaatgtgt
tattggagtacacaatatgaaattcaaaaaaatcaataaaaatactatgt
tcgaggaaaaaactgtggtgatggtgtttaaatgtgtggatctatttgga
agagtgatatatttagttatcaaggaaaaaaagcactgttcaatgaggaa
tgctgcactaatgttaccctggaaaaactagactctctgtcatcaacatg
ctgctgacattgttgtaaacaagcaagttaaggaaaaaagtcttgacaag
agaattaattgtgcaagctaagcacattaacacccaaaagggctacatga
aaactccctcagatttctgtaatggtgtactagtttatactcctaacagc
actgagtaagaatattccctttccttgcatgctcactagcattttgtcat
ttgttttaagggtgttttaatgttgttgttagttgttg
ttgcacacaccagacacgtgctccactgcagaactgcattcccagcatga
aagctgcaagcgttccatgctattccaatgtattccgtggcttggcctat
ggccttgctggacccaaaccgcgaattaggattgtagttagctgtcttgc
aacactcttggtttcctctgcttcctctctactgcagtgcaccgagtagc
cctggcctgtggcagtgagttctttggggccatgcttctgagtgggatga
gggagtcccagggcacaaaggtgactctgcgtaccatctcttcccaagac
ctgagactcctcgtttcttttgcctacactggagttgttcgagaaagatg
gccaggattgctaagagctgcccaggctgctctgcaataccagagctctt
cctgtctggatttgtgtcagaaagccttggcacaaagcctctgccccgcc
ctttgcctagctttgttccctatgattgaggcccctggcttggagaaagt
ctgggggaaagcccacgattacctcctcagtcacctgcctgctgtggctt
cgtgccctaccttttcatccttgccagttacctgcctggctgagctcctg
gacagtgatgaactccatgtgcaagaagagtttgaggctttctcagctgc
acggtgttggctggctgccaaccccgagacccacgagtcagaggccaagg
cactgtttgcgatgtgttcgctttggccgcatgtctaccagagagctgcg
aaaggtgcgggcagctgggctccccccatctctgccccccgatctgctgt
accagctgatggtggaagctgaagttccaggtcaagagagatggagggag
cctgacccagccctggtggtgattggtggggatgggcttagacctgacat
ggacccgagacagtcattcatgcaaagtggtggtgggcccgggcattttc
acttgtgcatggggtctggtacgaactgagagtggtagccgctgccattg
cctgcccagggcgctttcgcacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_51366677_51367509
seq2: B6Ng01-202E12.b_46_883

seq1  GAATTCTTTGTTTAGCTCTGTACCCCATTTTTAAACAGGGTTATTTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACCCCATTTTTAAACAGGGTTATTTGGTT  50

seq1  CTTTGGAGTCTAACTTCTTGAGTTCTTTGTATATATTGGATATTAGTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAGTCTAACTTCTTGAGTTCTTTGTATATATTGGATATTAGTCCT  100

seq1  CTATAGGATGTGGGGTTGGTAAGGAGTTTTCTTTAATAGGCTGGCCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGGATGTGGGGTTGGTAAGGAGTTTTCTTTAATAGGCTGGCCACTG  150

seq1  GGAGTTTGACTGTGCACCAGTGAGTATATGGGCAACACAAAATTGAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTGACTGTGCACCAGTGAGTATATGGGCAACACAAAATTGAACTT  200

seq1  GGTTTTCTTTAGTCATCTTATTTCTTCTTTTCCTTCTGCTTCTGCTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCTTTAGTCATCTTATTTCTTCTTTTCCTTCTGCTTCTGCTTCTC  250

seq1  CTCCTCCTCCTCCTCCTCCTCCTTTCTTCTTCCTCTTCTTCTCCTCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTCCTCCTCCTCCTCCTTTCTTCTTCCTCTTCTTCTCCTCTTCC  300

seq1  TCCTTCTTTCTCCTCATTCCTCCTCCTCCTCCTCTTCCTTCTTCTTCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTTTCTCCTCATTCCTCCTCCTCCTCCTCTTCCTTCTTCTTCTAG  350

seq1  GCTGGAAGATCACAAGGACAGTGGATCTGGGAATAATAGGAAGAATGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAGATCACAAGGACAGTGGATCTGGGAATAATAGGAAGAATGTGT  400

seq1  TATTGGAGTACACAATATGAAATTCAAAAAAATCAATAAAAATACTATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAGTACACAATATGAAATTCAAAAAAATCAATAAAAATACTATGT  450

seq1  TCGAGGAAAAAACTGTGGTGATGGTGTTTAAATGTGTGGATCTATTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGGAAAAAACTGTGGTGATGGTGTTTAAATGTGTGGATCTATTTGGA  500

seq1  AGAGTGATATATTTAGTTATCAAGGAAAAAAAGCACTGTTCAATGAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGATATATTTAGTTATCAAGGAAAAAAAGCACTGTTCAATGAGGAA  550

seq1  TGCTGCACTAATGTTACCCTGGAAAAACTAGACTCTCTGTCATCAACATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCACTAATGTTACCCTGGAAAAACTAGACTCTCTGTCATCAACATG  600

seq1  CTGCTGACATTGTTGTAAACAAGCAAGTTAAGGAAAAAAGTCTTGACAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGACATTGTTGTAAACAAGCAAGTTAAGGAAAAAAGTCTTGACAAG  650

seq1  AGAATTAATTGTGCAAGCTAAGCACATTAACACCCAAAAGGGCTACATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAATTGTGCAAGCTAAGCACATTAACACCCAAAAGGGCTACATGA  700

seq1  AAACTCCCTCAGATTTCTGTAATGGTGTACTAGTTTATACTCCTAACAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCCTCAGATTTCTGTAATGGTGTACTAGTTTATACTCCTAACAGC  750

seq1  ACTGAGTAAGAATATT-CCTTTCCTTGCATGCTCACTAGCA-TTTGTCAT  798
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  ACTGAGTAAGAATATTCCCTTTCCTTGCATGCTCACTAGCATTTTGTCAT  800

seq1  TTGTTTT-AGGGTG-TTTAATGTTGTTGTT-GTTGTTG  833
      ||||||| |||||| ||||||||||||||| |||||||
seq2  TTGTTTTAAGGGTGTTTTAATGTTGTTGTTAGTTGTTG  838

seq1: chr14_51512138_51513161
seq2: B6Ng01-202E12.g_75_1097 (reverse)

seq1  CGTGCCGAAAGCGCCCTGGGGCAGGCAAATTGGGCAGCCGGCACCACTCC  50
      |||| |||||||||||| ||||||||||    |||||| |  |||||| |
seq2  CGTG-CGAAAGCGCCCT-GGGCAGGCAA---TGGCAGCGGCTACCACT-C  44

seq1  ACAGTTCGTACCAGA-CCCATGCCACAGTG-AAATGCCCGGGCCCACCA-  97
       |||||||||||||| |||||||   |||| |||||||||||||||||| 
seq2  TCAGTTCGTACCAGACCCCATGCACAAGTGAAAATGCCCGGGCCCACCAC  94

seq1  CACTTTGCATG-ATGGCTGTCTTCGGTCCATGTCAGGTCTAAGCCCATCC  146
      ||||||||||| ||| ||||||  ||||||||||||||||||||||||||
seq2  CACTTTGCATGAATGACTGTCTCGGGTCCATGTCAGGTCTAAGCCCATCC  144

seq1  CCACCAATCACCACCAGGGCTTGGTCAGGCTCCCTCCATCTCTCTTGACC  196
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCACCAATCACCACCAGGGCTGGGTCAGGCTCCCTCCATCTCTCTTGACC  194

seq1  TGGAACTTCAGCTTCCACCATCAGCTGGTACAGCAGATCGGGGGGCAGAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTTCAGCTTCCACCATCAGCTGGTACAGCAGATCGGGGGGCAGAG  244

seq1  ATGGGGGGAGCCCAGCTGCCCGCACCTTTCGCAGCTCTCTGGTAGACATG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGGGAGCCCAGCTGCCCGCACCTTTCGCAGCTCTCTGGTAGACATG  294

seq1  CGGCCAAAGCGAACACATCGC-AACAGTGCCTTGGCCTCTGACTCGTGGG  345
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CGGCCAAAGCGAACACATCGCAAACAGTGCCTTGGCCTCTGACTCGTGGG  344

seq1  TCTCGGGGTTGGCAGCCAGCCAACACCGTGCAGCTGAGAAAGCCTCAAAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGGGGTTGGCAGCCAGCCAACACCGTGCAGCTGAGAAAGCCTCAAAC  394

seq1  TCTTCTTGCACATGGAGTTCATCACTGTCCAGGAGCTCAGCCAGGCAGGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGCACATGGAGTTCATCACTGTCCAGGAGCTCAGCCAGGCAGGT  444

seq1  AACTGGCAAGGATGAAAAGGTAGGGCACGAAGCCACAGCAGGCAGGTGAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCAAGGATGAAAAGGTAGGGCACGAAGCCACAGCAGGCAGGTGAC  494

seq1  TGAGGAGGTAATCGTGGGCTTTCCCCCAGACTTTCTCCAAGCCAGGGGCC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGGTAATCGTGGGCTTTCCCCCAGACTTTCTCCAAGCCAGGGGCC  544

seq1  TCAATCATAGGGAACAAAGCTAGGCAAAGGGCGGGGCAGAGGCTTTGTGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCATAGGGAACAAAGCTAGGCAAAGGGCGGGGCAGAGGCTTTGTGC  594

seq1  CAAGGCTTTCTGACACAAATCCAGACAGGAAGAGCTCTGGTATTGCAGAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTTTCTGACACAAATCCAGACAGGAAGAGCTCTGGTATTGCAGAG  644

seq1  CAGCCTGGGCAGCTCTTAGCAATCCTGGCCATCTTTCTCGAACAACTCCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGGCAGCTCTTAGCAATCCTGGCCATCTTTCTCGAACAACTCCA  694

seq1  GTGTAGGCAAAAGAAACGAGGAGTCTCAGGTCTTGGGAAGAGATGGTACG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGGCAAAAGAAACGAGGAGTCTCAGGTCTTGGGAAGAGATGGTACG  744

seq1  CAGAGTCACCTTTGTGCCCTGGGACTCCCTCATCCCACTCAGAAGCATGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCACCTTTGTGCCCTGGGACTCCCTCATCCCACTCAGAAGCATGG  794

seq1  CCCCAAAGAACTCACTGCCACAGGCCAGGGCTACTCGGTGCACTGCAGTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAGAACTCACTGCCACAGGCCAGGGCTACTCGGTGCACTGCAGTA  844

seq1  GAGAGGAAGCAGAGGAAACCAAGAGTGTTGCAAGACAGCTAACTACAATC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAAGCAGAGGAAACCAAGAGTGTTGCAAGACAGCTAACTACAATC  894

seq1  CTAATTCGCGGTTTGGGTCCAGCAAGGCCATAGGCCAAGCCACGGAATAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCGCGGTTTGGGTCCAGCAAGGCCATAGGCCAAGCCACGGAATAC  944

seq1  ATTGGAATAGCATGGAACGCTTGCAGCTTTCATGCTGGGAATGCAGTTCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAATAGCATGGAACGCTTGCAGCTTTCATGCTGGGAATGCAGTTCT  994

seq1  GCAGTGGAGCACGTGTCTGGTGTGTGCAA  1024
      |||||||||||||||||||||||||||||
seq2  GCAGTGGAGCACGTGTCTGGTGTGTGCAA  1023