BAC Information

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BAC

Clone NameB6Ng01-203D18
Chromosome14 (Build37)
Map Location 90,249,748 - 90,390,090
singlet/doubletdoublet
Overlap geneEG328451
Upstream genenone
Downstream geneLOC100043336
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203D18.bB6Ng01-203D18.g
ACCGA023505GA023506
length2441,088
definitionB6Ng01-203D18.b B6Ng01-203D18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,389,847 - 90,390,090)(90,249,748 - 90,250,849)
sequence
ttgcacagaatttgacagggttcataagaaaaaaccaaaaaattcagaat
aaattcatgttaaattcaaatcttagggttggtctgtgtctctgtcattg
ttatcttgttgttttagaactaatgtcgactctatgtgcattagttctat
tgtatgttcttattgagataattttgtcataaaattcatgaatatttaat
gaacttatttatagaaccacactatctgacatgctaggtgtgtg

gaattctgttctcaagtgagatgggagacacataaactatttagtttttt
tattcttcagacacaagtactctatctcttaaaacactaacttaggccat
aacttatcttagaagtttcattgagttacttatgtgtgcttaacttttga
gttattgtatgtggttataatacccttttctagggattttaagtctgttg
ttagctctttgagaacattttctacatctttgaaattttaaaaatcttaa
aaaaataatcaatagttgaacattagatttcttcaggttatgtgaaaata
caattattcctacagtttttcctttacttattttatttatttatttattt
attcattcatttatttaatctctggaaagttttgaccttgctattcccat
gtgtctgtcgcgttaggtccttgacatgccctcactaatatcagcagtaa
tcaccaagtaattcatctgctcttttctcattcactcatagcttctcagg
acctcatagccccatcactcccagacctgtcaatgacacgctattaaaat
gaatagagcaactaacaggaaatgggtgtctattatcagaagcttctgcc
aggggatggaatgaatacaaaaaatctatagttactagtttgagatagga
agtgaatgatttttattcattctaggaagacactgtaaaggatggctatt
ctgttatacgtgccaaatttgtgacatctctacagaattctgatccagag
gttctgattgctataagggaaaatgaagatatatcattcttcattacttg
ttcctgagaaaaggtttaattacttttactacagaaatttatagtaactc
catgcttttcaaaaatattcttaatgatatgttagccattttaattgatt
ttttaatttaataaaaattatttttattggatatgttgtgtatttatatt
tcaaatgttaaccattccaattttctcctggacaccatgtatcacatccc
tcttcctgcttctatgagaatgctctctaccatcattcactcccacctca
ctgcatgcaattcctgcactgaacattagcttacagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90389847_90390090
seq2: B6Ng01-203D18.b_49_292 (reverse)

seq1  CACACACCTAGCATGTCAGATAGTGTGGTTCTATAAATAAGTTCATTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCTAGCATGTCAGATAGTGTGGTTCTATAAATAAGTTCATTAAA  50

seq1  TATTCATGAATTTTATGACAAAATTATCTCAATAAGAACATACAATAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATGAATTTTATGACAAAATTATCTCAATAAGAACATACAATAGAA  100

seq1  CTAATGCACATAGAGTCGACATTAGTTCTAAAACAACAAGATAACAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGCACATAGAGTCGACATTAGTTCTAAAACAACAAGATAACAATGA  150

seq1  CAGAGACACAGACCAACCCTAAGATTTGAATTTAACATGAATTTATTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACACAGACCAACCCTAAGATTTGAATTTAACATGAATTTATTCTG  200

seq1  AATTTTTTGGTTTTTTCTTATGAACCCTGTCAAATTCTGTGCAA  244
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTGGTTTTTTCTTATGAACCCTGTCAAATTCTGTGCAA  244


seq1: chr14_90249748_90250849
seq2: B6Ng01-203D18.g_62_1149

seq1  GAATTCTGTTCTCAAGTGAGATGGGAGACACATAAACTATTTAGTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCTCAAGTGAGATGGGAGACACATAAACTATTTAGTTTTTT  50

seq1  TATTCTTCAGACACAAGTACTCTATCTCTTAAAACACTAACTTAGGCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTCAGACACAAGTACTCTATCTCTTAAAACACTAACTTAGGCCAT  100

seq1  AACTTATCTTAGAAGTTTCATTGAGTTACTTATGTGTGCTTAACTTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATCTTAGAAGTTTCATTGAGTTACTTATGTGTGCTTAACTTTTGA  150

seq1  GTTATTGTATGTGGTTATAATACCCTTTTCTAGGGATTTTAAGTCTGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGTATGTGGTTATAATACCCTTTTCTAGGGATTTTAAGTCTGTTG  200

seq1  TTAGCTCTTTGAGAACATTTTCTACATCTTTGAAATTTTAAAAATCTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCTTTGAGAACATTTTCTACATCTTTGAAATTTTAAAAATCTTAA  250

seq1  AAAAATAATCAATAGTTGAACATTAGATTTCTTCAGGTTATGTGAAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATCAATAGTTGAACATTAGATTTCTTCAGGTTATGTGAAAATA  300

seq1  CAATTATTCCTACAGTTTTTCCTTTACTTATTTTATTTATTTATTTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATTCCTACAGTTTTTCCTTTACTTATTTTATTTATTTATTTATTT  350

seq1  ATTCATTCATTTATTTAATCTCTGGAAAGTTTTGACCTTGCTATTCCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCATTTATTTAATCTCTGGAAAGTTTTGACCTTGCTATTCCCAT  400

seq1  GTGTCTGTCGCGTTAGGTCCTTGACATGCCCTCACTAATATCAGCAGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGTCGCGTTAGGTCCTTGACATGCCCTCACTAATATCAGCAGTAA  450

seq1  TCACCAAGTAATTCATCTGCTCTTTTCTCATTCACTCATAGCTTCTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAAGTAATTCATCTGCTCTTTTCTCATTCACTCATAGCTTCTCAGG  500

seq1  ACCTCATAGCCCCATCACTCCCAGACCTGTCAATGACACGCTATTAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATAGCCCCATCACTCCCAGACCTGTCAATGACACGCTATTAAAAT  550

seq1  GAATAGAGCAACTAACAGGAAATGGGTGTCTATTATCAGAAGCTTCTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAGCAACTAACAGGAAATGGGTGTCTATTATCAGAAGCTTCTGCC  600

seq1  AGGGGATGGAATGAATACAAAAAATCTATAGTTACTAGTTTGAGATAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATGGAATGAATACAAAAAATCTATAGTTACTAGTTTGAGATAGGA  650

seq1  AGTGAATGATTTTTATTCATTCTAGGAAGACACTGTAAAGGATGGCTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATGATTTTTATTCATTCTAGGAAGACACTGTAAAGGATGGCTATT  700

seq1  CTGTTATACGTGCCAAATTTGTGACATCTCTACAGAATTCTGATCCAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTATACGTGCCAAATTTGTGACATCTCTACAGAATTCTGATCCAGAG  750

seq1  GTTCTGATTGCTATAAGGGAAAATGAAGATATATCATTCTTCATTACTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGATTGCTATAAGGGAAAATGAAGATATATCATTCTTCATTACTTG  800

seq1  TTCCTGAGAAAAGGTTTAATTACTTTTACTACAGAAATTTATAGTAACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAGAAAAGGTTTAATTACTTTTACTACAGAAATTTATAGTAACTC  850

seq1  CATGCTTTTCAAAAATATTCTTAATGATATGTTAGCCATTTTAATTGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTTTCAAAAATATTCTTAATGATATGTTAGCCATTTTAATTGATT  900

seq1  TTTTAATTTAATAAAAATTATTTTTATTGGATATGTTGTGTATTTATATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTTAATAAAAATTATTTTTATTGGATATGTTGTGTATTTATATT  950

seq1  TCAAATGTTAACCCATTCCCAATTTTCTCCCTGGACACCATGTATCACAT  1000
      ||||||||||| ||||| |||||||||| |||||||||||||||||||||
seq2  TCAAATGTTAA-CCATT-CCAATTTTCT-CCTGGACACCATGTATCACAT  997

seq1  CCCTCTTCCCTTGGCTTCTATGAGAATGCTCTCCTACCCATCCAATCACT  1050
      |||||||||    ||||||||||||||||||| ||| |||| || |||||
seq2  CCCTCTTCC---TGCTTCTATGAGAATGCTCT-CTA-CCAT-CATTCACT  1041

seq1  CCCACCTCACTGCATGGCATTCCCTGCACTGGAACATTTAGCCTTTACAG  1100
      ||||||||||||||| ||| | |||||||| ||||| |||||  ||||||
seq2  CCCACCTCACTGCAT-GCAATTCCTGCACT-GAACA-TTAGC--TTACAG  1086

seq1  GA  1102
      ||
seq2  GA  1088


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