BAC Information

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BAC

Clone NameB6Ng01-203F08
Chromosome14 (Build37)
Map Location 100,326,923 - 100,328,126
singlet/doubletsinglet
Overlap geneKlf12
Upstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623
Downstream geneLOC100043413, EG668683, EG668684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203F08.bB6Ng01-203F08.g
ACCGA023579GA023580
length1,1841,198
definitionB6Ng01-203F08.b B6Ng01-203F08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcccctcaccaaagacagaaactccttgaggacctcaagcatt
agcacaaaacctgcacacagtaggtgctcaaaatatgctaagtctctaaa
tacctaattgtttcagctgggtaaatttaaaaagtcttaaaagattctgt
ttcttttaagattaccattctaagagtaaagattggtttaggcatgtaat
ttagtaatggacttgcaaactggttaaatcattctgttttcaagaaatgc
aatattctttctctcccctttaagtatttatgacccactgtgtgcaggtc
ttatgctaagtactggaaacatggtagtccaagagacccacacatccact
ctgttcacgcacagctcacacttacaaagatgtgtggtgtggactcagag
aacctaagaactctggatcttcatcagcaatgggctgtatgctttactta
gggagaagggttttatcaggggagactatgtaaatgagacagaacttggg
agaacatgaatatttaaatggaaggagagttaatgagaaagaggttcaaa
gaaatgtcaaggcagcttagttatatggggactgtcttagctatgccttg
gttacagcactgcactaaatagttgtgtatctttttataatgatcatcaa
aatttactgaccatactaaacacagttcctaggacatttagtgtccctaa
gaaccacgagacaatatagttaggaagccccattttatagattaagaagc
cgaggaacagatatattaaataactcgccaaaggttagagttaggatata
aaaactgaacctcacaagtcagtagactgatcccataatccttacctcat
tttgcctcttttcattttaaagattaaggtaataacatctttcaaggcat
cttcatagaatggctataagcaataatgaaggtatttatgcaactgaaac
tatgaaacattaaaaaaattaaatattattgaaaagtggttttatagtgc
cactatctgtctggcaatcagatatcactgctttcttttggggcgatgtg
gtagaaatgaggagtgagactgtgggctcacttctccttccctccaaggg
atgcatattaccagcatattatcaggccaactgggagtaaatattgaatc
gaacgctgccaatcctgcttagaatttctgtcac

gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtctgagaagctctgtggctcttgtccggaaggaggccggccg
tctggagctgaggatggcgccgcccagaagctctgcgactctcgcccgtc
ctagaaacggctggcactctgtattccacacggtcacccgtgcagcctgc
cctccgcggagtcccggagccaagaaggctcccgccggcgcctgtgccac
aaacctctcaggccgggcagacccccgttctctcaccaggaaggtggccg
gctgtctggagctgaagatggcgccgcccagaagctctgcgactctcgcc
cgtcccagaaacggctggcactctgtattccacacggtcacccgtgcagc
ctgccctccgcggagtcccggagccaagacggctcccgccggcgcctgtg
ccacaaacctctcaggccgggcagacccccgtgctctcaccaggaaggtg
gccggctgtctggagctgaagatggcgccgcccagagctctgcggctctc
gctcgtcccagaaacggctggcactctgtattccacacgtcacctgtgca
gctgccctccgcggagtcccggagcagagctcctgccggcgcctgtgcca
caaaccttctcaggcggcagaccccgtgctctcacaggaaaggtgccgct
gtctgaacctgagatggcgcccgccataagccttggcaatcttcgccgtt
ccgaacgctgacatctagacgaatacactctataatgagggtacgttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_100326923_100328126
seq2: B6Ng01-203F08.b_46_1229

seq1  GAATTCTTCCCCTCACCAAAGACAGAAACTCCTTGAGGACCTCAAGCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCCTCACCAAAGACAGAAACTCCTTGAGGACCTCAAGCATT  50

seq1  AGCACAAAACCTGCACACAGTAGGTGCTCAAAATATGCTAAGTCTCTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAAACCTGCACACAGTAGGTGCTCAAAATATGCTAAGTCTCTAAA  100

seq1  TACCTAATTGTTTCAGCTGGGTAAATTTAAAAAGTCTTAAAAGATTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAATTGTTTCAGCTGGGTAAATTTAAAAAGTCTTAAAAGATTCTGT  150

seq1  TTCTTTTAAGATTACCATTCTAAGAGTAAAGATTGGTTTAGGCATGTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTAAGATTACCATTCTAAGAGTAAAGATTGGTTTAGGCATGTAAT  200

seq1  TTAGTAATGGACTTGCAAACTGGTTAAATCATTCTGTTTTCAAGAAATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAATGGACTTGCAAACTGGTTAAATCATTCTGTTTTCAAGAAATGC  250

seq1  AATATTCTTTCTCTCCCCTTTAAGTATTTATGACCCACTGTGTGCAGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTTTCTCTCCCCTTTAAGTATTTATGACCCACTGTGTGCAGGTC  300

seq1  TTATGCTAAGTACTGGAAACATGGTAGTCCAAGAGACCCACACATCCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTAAGTACTGGAAACATGGTAGTCCAAGAGACCCACACATCCACT  350

seq1  CTGTTCACGCACAGCTCACACTTACAAAGATGTGTGGTGTGGACTCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCACGCACAGCTCACACTTACAAAGATGTGTGGTGTGGACTCAGAG  400

seq1  AACCTAAGAACTCTGGATCTTCATCAGCAATGGGCTGTATGCTTTACTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAAGAACTCTGGATCTTCATCAGCAATGGGCTGTATGCTTTACTTA  450

seq1  GGGAGAAGGGTTTTATCAGGGGAGACTATGTAAATGAGACAGAACTTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAGGGTTTTATCAGGGGAGACTATGTAAATGAGACAGAACTTGGG  500

seq1  AGAACATGAATATTTAAATGGAAGGAGAGTTAATGAGAAAGAGGTTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATGAATATTTAAATGGAAGGAGAGTTAATGAGAAAGAGGTTCAAA  550

seq1  GAAATGTCAAGGCAGCTTAGTTATATGGGGACTGTCTTAGCTATGCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTCAAGGCAGCTTAGTTATATGGGGACTGTCTTAGCTATGCCTTG  600

seq1  GTTACAGCACTGCACTAAATAGTTGTGTATCTTTTTATAATGATCATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGCACTGCACTAAATAGTTGTGTATCTTTTTATAATGATCATCAA  650

seq1  AATTTACTGACCATACTAAACACAGTTCCTAGGACATTTAGTGTCCCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACTGACCATACTAAACACAGTTCCTAGGACATTTAGTGTCCCTAA  700

seq1  GAACCACGAGACAATATAGTTAGGAAGCCCCATTTTATAGATTAAGAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACGAGACAATATAGTTAGGAAGCCCCATTTTATAGATTAAGAAGC  750

seq1  CGAGGAACAGATATATTAAATAACTCGCCAAAGGTTAGAGTTAGGATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGAACAGATATATTAAATAACTCGCCAAAGGTTAGAGTTAGGATATA  800

seq1  AAAACTGAACCTCACAAGTCAGTAGACTGATCCCATAATCCTTACCTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGAACCTCACAAGTCAGTAGACTGATCCCATAATCCTTACCTCAT  850

seq1  TTTGCCTCTTTTCATTTTAAAGATTAAGGTAATAACATCTTTCAAGGCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCTTTTCATTTTAAAGATTAAGGTAATAACATCTTTCAAGGCAT  900

seq1  CTTCATAGAATGGCTATAAGCAATAATGAAGGTATTTATGCAACTGAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAGAATGGCTATAAGCAATAATGAAGGTATTTATGCAACTGAAAC  950

seq1  TATGAAACATTAAAAAAATTAAAATATTATTGAAAAGTGGTTTTAATAGT  1000
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  TATGAAACATTAAAAAAATT-AAATATTATTGAAAAGTGGTTTT-ATAGT  998

seq1  GCCCACTATCTGTTCTTGGCAAAATCAGATATCACTGCTTTCTTTTGGGG  1050
      | |||||||||||   ||||  ||||||||||||||||||||||||||||
seq2  G-CCACTATCTGT--CTGGC--AATCAGATATCACTGCTTTCTTTTGGGG  1043

seq1  CGATGTGGTAGAAATGAGGAGTGAGGACTGTGGGGCTCACTTCTCCCTCC  1100
      |||||||||||||||||||||||| |||||| |||||||||||||| |||
seq2  CGATGTGGTAGAAATGAGGAGTGA-GACTGT-GGGCTCACTTCTCCTTCC  1091

seq1  CTCCAGGGGATGCATTATTAACCAGCAATATAACCAGGCACACCTGGGAG  1150
      ||||| |||||||| |||| |||||| |||| | ||||| || |||||||
seq2  CTCCAAGGGATGCA-TATT-ACCAGC-ATATTATCAGGC-CAACTGGGAG  1137

seq1  TAAATTATTGATTCCAGAACCCGCTGCCAATCCTGCATTAGATTTTTCTG  1200
      |||| |||||| ||  |||  ||||||||||||||| |||||  ||||||
seq2  TAAA-TATTGAATC--GAA--CGCTGCCAATCCTGC-TTAGA-ATTTCTG  1180

seq1  TCAC  1204
      ||||
seq2  TCAC  1184


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