BAC Information

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BAC

Clone NameB6Ng01-205E17
Chromosome14 (Build37)
Map Location 82,020,502 - 82,123,783
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205E17.bB6Ng01-205E17.g
ACCGA025016GA025017
length9241,103
definitionB6Ng01-205E17.b B6Ng01-205E17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,020,502 - 82,021,105)(82,122,666 - 82,123,783)
sequence
gaattctttgcttagctctgtaccccatttttaatagggttatttcgttc
tctggagtctaacttcttgatatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatagccctatatata
tatgcaggattggtaaagatcttttccttatctattggttgccattttgt
cctattgacagtgtcctttgccttacagaagcattgcagttttatgacat
cccatttgttaattcttgatcttacagcacaagccattggtgttctgttc
aggaatttcccccctgtgcccatatgttcaaggatcttccccacattctc
ctctgtaagtttcggtgtatctggttttatgtggagttccttgatccact
tagacttgtgctttgtacaaggagataaaaatggatcaattcacattctt
ctacatgctaactgccagttgaaccaaaatcatttgttgaaaatgctgtc
ttttatccactgcatggttttagttcctttgtcaattatcaattgaccat
aggtgtgtgggttcatttctgggtgttcaattctattccatttatctacc
tgtctgtcattgtaccagtaccacgcagtttttttatctcaattgttctg
tattacagcttgaggtcagggataattttttggttttttgagacagggtt
tctctgtatagccctggctgtcctggaactcactctagatcatgctgacc
tcaaactcagcaatctgcctttttctgcctcccaagtgccaagattaaag
gcgtgcaccagcactgcccatcacgctcactgttctattatatatgttcc
taaaccatacagacaaaactttgttacatcttctactatctcttattatt
tttattctgaagaaagttaccaaa
gaattctactttgtctatgtatctcgtccaaaattctgctttcttgctgc
tttatttggtgaaaagctgtttttaagacattgatcctttacttttcttt
tttaaaattcaatataaccatacatgttatcccttctgttttctccttat
tcttttgcaaactaatagctttcttttctcattaaatattgtgactcaac
attcctatagcagtgtttctcagcctgtagataggacccaaaatcttttg
tgggggaggtcttgaaatagcaacagaaatatttttactcttgggtggat
catcacattataaggaaatgtattaaaatattagcattaggatagtgtta
ttttaaacaaaaaatctcaatctatgtaggccagtctggcctcaaattta
taatactcttgttggagattatctccttattatacaaactatgatatctg
aaccagcatatacctgattacaagttgtactttggcatcattaagcatca
cctgcttcattgttttataaatacttcttctttcaccttcttgctggttt
attaaaatgttgatggcctatagcagaggctggaacttcctagaagagat
aggaactttgggggagagtcagacactgaaagattcagtcagcaagacac
caaggaagaagcaggccaataaagaagaagagaaaagtaaccagccaaga
ggcagaacttagattagttgaaataggataattaagtcacacactaatgg
gaaacaagcctaggtgtaaggccaaggcttataaatcaatataatttttg
tgtcatcattcgatactaggggtgacatagaaagacccatgattacattc
tataactgtgactcagataaaaagattataggcttgttcttactataata
ttacacctaactagcaaccatattttaaacatcacatgactttttagtat
attataattgtagtagaattacatacctttcaagaataaaaaagaccttt
ctccctctagtcccaaatggctatcttcctagaatcttttttatgtccca
gtctcagtgataccctcttttatgggatgatgagaatcgggatgtatgca
aaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82020502_82021105
seq2: B6Ng01-205E17.b_371_967

seq1  TCAAGGATCTTCCCCACATTCTCCTCTGTAAGTTTCGGTGTATCTGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGATCTTCCCCACATTCTCCTCTGTAAGTTTCGGTGTATCTGGTTT  50

seq1  TATGTGGAGTTCCTTGATCCACTTAGACTTGTGCTTTGTACAAGGAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGAGTTCCTTGATCCACTTAGACTTGTGCTTTGTACAAGGAGATA  100

seq1  AGAATGGATCAATTCACATTCTTCTACATGCTAACTGCCAGTTGAACCAA  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGATCAATTCACATTCTTCTACATGCTAACTGCCAGTTGAACCAA  150

seq1  AATCATTTGTTGAAAATGCTGTCTTTTATCCACTGCATGGTTTTAGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTTGTTGAAAATGCTGTCTTTTATCCACTGCATGGTTTTAGTTCC  200

seq1  TTTGTCAATTATCAATTGACCATAGGTGTGTGGGTTCATTTCTGGGTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAATTATCAATTGACCATAGGTGTGTGGGTTCATTTCTGGGTGTT  250

seq1  CAATTCTATTCCATTTATCTACCTGTCTGTCATTGTACCAGTACCACGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTATTCCATTTATCTACCTGTCTGTCATTGTACCAGTACCACGCA  300

seq1  G-TTTTTTATCACAATTGTTCTGTAGTACAGCTTGAGGTCAGGGATAA-T  348
      | ||||||||| ||||||||||||| |||||||||||||||||||||| |
seq2  GTTTTTTTATCTCAATTGTTCTGTATTACAGCTTGAGGTCAGGGATAATT  350

seq1  TTTTGGTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGA  400

seq1  ACTCACTCTAGACCATGCTGACCTCAAACTCAGCAATCTGCCTTTTTCTG  448
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCTAGATCATGCTGACCTCAAACTCAGCAATCTGCCTTTTTCTG  450

seq1  CCTCCCAAGTGCCAAGATTAAAGGCGTGCACCACCACTGCCCAGCAGGCT  498
      ||||||||||||||||||||||||||||||||| ||||||||| || || 
seq2  CCTCCCAAGTGCCAAGATTAAAGGCGTGCACCAGCACTGCCCATCACGC-  499

seq1  TCACTGTTCTATTAGATATGTTCCCTAGACCAGACAAGACAAAACTTTGT  548
      |||||||||||||| ||||||| |||| |||| || ||||||||||||||
seq2  TCACTGTTCTATTATATATGTT-CCTAAACCATAC-AGACAAAACTTTGT  547

seq1  TAACATCTTCTACTATCTTTTTATTTATTTTTTTTCTGAAAGTAATGTTT  598
      | |||||||||||||||| ||   |||||||| ||||| ||| ||   ||
seq2  T-ACATCTTCTACTATCTCTT--ATTATTTTTATTCTG-AAGAAA--GTT  591

seq1  ACCAAA  604
      ||||||
seq2  ACCAAA  597

seq1: chr14_82122666_82123783
seq2: B6Ng01-205E17.g_66_1168 (reverse)

seq1  TTTTGCATACATCACAAATTCTCATCATCACAATAAAAGAGGGTATCAAC  50
      ||||||||||||| |  |||||||||||| | ||||||||||||||||  
seq2  TTTTGCATACATC-CCGATTCTCATCATC-CCATAAAAGAGGGTATCA--  46

seq1  TTGAGAATTGGGACATAAAAAAAGATCTAGGAAGGATAGCCATTTGGGAC  100
       |||| | ||||||||||||||   |||||||| ||||||||||||||||
seq2  CTGAG-ACTGGGACATAAAAAAGATTCTAGGAA-GATAGCCATTTGGGAC  94

seq1  TAGAGGGAGAAAGGTTTTTTTTTTTTTTTTTTTTTTGAAAGTTATGTAAT  150
      ||||||||||||||        | |||||| || ||||||| ||||||||
seq2  TAGAGGGAGAAAGG--------TCTTTTTTATTCTTGAAAGGTATGTAAT  136

seq1  TCTACTACAATTATAAATATACTAAAAAGTCATGTGATGTTTAAAATATG  200
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTACTACAATTAT-AATATACTAAAAAGTCATGTGATGTTTAAAATATG  185

seq1  GTTGCTAGTTAGGTGTAATATTATAGTAAGAACAAGCCTATAATCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTAGTTAGGTGTAATATTATAGTAAGAACAAGCCTATAATCTTTTT  235

seq1  ATCTGAGTCACAGTTATAGAATGTAATCATGGGTCTTTCTATGTCACCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGTCACAGTTATAGAATGTAATCATGGGTCTTTCTATGTCACCCC  285

seq1  TAGTATCGAATGATGACACAAAAATTATATTGATTTATAAGCCTTGGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATCGAATGATGACACAAAAATTATATTGATTTATAAGCCTTGGCCT  335

seq1  TACACCTAGGCTTGTTTCCCATTAGTGTGTGACTTAATTATCCTATTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTAGGCTTGTTTCCCATTAGTGTGTGACTTAATTATCCTATTTCA  385

seq1  ACTAATCTAAGTTCTGCCTCTTGGCTGGTTACTTTTCTCTTCTTCTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATCTAAGTTCTGCCTCTTGGCTGGTTACTTTTCTCTTCTTCTTTAT  435

seq1  TGGCCTGCTTCTTCCTTGGTGTCTTGCTGACTGAATCTTTCAGTGTCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGCTTCTTCCTTGGTGTCTTGCTGACTGAATCTTTCAGTGTCTGA  485

seq1  CTCTCCCCCAAAGTTCCTATCTCTTCTAGGAAGTTCCAGCCTCTGCTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCCAAAGTTCCTATCTCTTCTAGGAAGTTCCAGCCTCTGCTATA  535

seq1  GGCCATCAACATTTTAATAAACCAGCAAGAAGGTGAAAGAAGAAGTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCAACATTTTAATAAACCAGCAAGAAGGTGAAAGAAGAAGTATTT  585

seq1  ATAAAACAATGAAGCAGGTGATGCTTAATGATGCCAAAGTACAACTTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACAATGAAGCAGGTGATGCTTAATGATGCCAAAGTACAACTTGTA  635

seq1  ATCAGGTATATGCTGGTTCAGATATCATAGTTTGTATAATAAGGAGATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTATATGCTGGTTCAGATATCATAGTTTGTATAATAAGGAGATAA  685

seq1  TCTCCAACAAGAGTATTATAAATTTGAGGCCAGACTGGCCTACATAGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAACAAGAGTATTATAAATTTGAGGCCAGACTGGCCTACATAGATT  735

seq1  GAGATTTTTTGTTTAAAATAACACTATCCTAATGCTAATATTTTAATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTTTTGTTTAAAATAACACTATCCTAATGCTAATATTTTAATACA  785

seq1  TTTCCTTATAATGTGATGATCCACCCAAGAGTAAAAATATTTCTGTTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTATAATGTGATGATCCACCCAAGAGTAAAAATATTTCTGTTGCT  835

seq1  ATTTCAAGACCTCCCCCACAAAAGATTTTGGGTCCTATCTACAGGCTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAGACCTCCCCCACAAAAGATTTTGGGTCCTATCTACAGGCTGAG  885

seq1  AAACACTGCTATAGGAATGTTGAGTCACAATATTTAATGAGAAAAGAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGCTATAGGAATGTTGAGTCACAATATTTAATGAGAAAAGAAAG  935

seq1  CTATTAGTTTGCAAAAGAATAAGGAGAAAACAGAAGGGATAACATGTATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAGTTTGCAAAAGAATAAGGAGAAAACAGAAGGGATAACATGTATG  985

seq1  GTTATATTGAATTTTAAAAAAGAAAAGTAAAGGATCAATGTCTTAAAAAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATTGAATTTTAAAAAAGAAAAGTAAAGGATCAATGTCTTAAAAAC  1035

seq1  AGCTTTTCACCAAATAAAGCAGCAAGAAAGCAGAATTTTGGACGAGATAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTCACCAAATAAAGCAGCAAGAAAGCAGAATTTTGGACGAGATAC  1085

seq1  ATAGACAAAGTAGAATTC  1118
      ||||||||||||||||||
seq2  ATAGACAAAGTAGAATTC  1103