BAC Information

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BAC

Clone NameB6Ng01-205O08
Chromosome14 (Build37)
Map Location 63,933,071 - 64,055,351
singlet/doubletdoublet
Overlap geneLOC100042988, LOC432868, Blk, LOC668293, BC065085
Upstream geneRnaseh2b, Gucy1b2, LOC100042960, Ppia-ps14_723.1, LOC545062, EG629059, E130113E03Rik, Ints6, LOC100042969, LOC668263, Wdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2, Gata4
Downstream geneTdh, Mtmr9, Xkr6, LOC668306, 2610028A01Rik, Sox7, 4930578I06Rik, Rp1l1, 4933401F05Rik, 1700007N14Rik, 1700049K14Rik, Msra
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205O08.bB6Ng01-205O08.g
ACCGA025452GA025453
length1,1301,144
definitionB6Ng01-205O08.b B6Ng01-205O08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,933,071 - 63,934,189)(64,054,239 - 64,055,351)
sequence
gaattctttacccttttgcctcactttcctaggtgctatgattccgtgca
tgcaccatcatacctaactttatacgccgtattcttttctttatttttta
gatttatttgtatttactggtatgttcatgtctgtatggatgtgtgtcct
acctgtgcgggtgcccacagaggccagaagatgggtagggtgacctggat
ctggagttgcaaggtagacgtgagggctgggaactgaacttgggtcttca
ggacaagtggggcacattcttaattgttgcaccggctctccagctctgtg
ttcagtgttaataggtaaagacagccttcttatccttatcactgttggac
gcccactgtcctgagtgtagggattttgttcctctcttcttaaaacattt
attatttatttattgtgcatgtgcgtgtgtgcgtgtgtacaacttgcctg
aattgcttttctccttttaccatgtgaatcctaggaattgaactctggtc
ctcagacttggcaccaatccccttttcccaataagccattttgttagccc
tggttcctctctggtacagtgaagaagtctaaaggattagctctactcag
agctcaaatactctcactcggatcagtccccaaacccatctcttcactgc
cttctgctgaggtgacttcgggttcagattccttgaaacagttaagggat
agcagctacctgatcctcttaggcccaagcatagccagcacaaacagctt
tgctctagagtctgagcaggaccagtctccattgctggacacaagggaat
agcaaggactaagtttactctctcattaagcaaatgaaaaccagtacagg
cacattaacaggcttttagacaaggagcagcaggtagtgtaggacaggga
ctttggagagaagggttgctctgccctgttacttgggagacctgggcatc
tgcagtaagggcagcccaatgggggagtctggtgggagaaggcacatgga
aggagatggctttggaatttcaaagggtccaaggtagccagagctcagat
gcagagcataaggtggaggaagagctaccgagagccctgccaagtcaatc
aggtctctctccgtacttctagtagagacc
gaattctccgcaccgttcttttttgaagggacgttcttttgcgttgcgtc
agggcggttgcctggcgaccgtagagctagtccgccgccagcctctcggc
gccgccgcccgcctcccattcaagccgcggcaggtcggcctcccggcacc
gctggtccgagtgcacccgggtcctaaagacccccgattctccctccccg
tgcaaggccaagcccagtcaggaactctcagcaagctccaggcgaaatca
aacccaaacttttttttcccattaagatcaaagcaaagagagttatgtcc
cgtcccgtcccgtcttactgccccctccctccaagcatggcaacgtggct
ttgccactgtcagcagttcgctgagggaatgggcagggaaagcgggctgc
actccacccaggaaagtcttgggttcctgatcccagcagcagccaccaag
tcagaccaactggcactgacctgcgcgctcgcgcgctcgcgtgccacacc
attgcagggctccagctgggtaggcatttgtgggcagctctggcttagtt
ttcaagtggggaaaactgggatgttaagaggaaagagctgtgggtagtgc
tggtgggcctgatgtgagagcctccttaaccacctgcacctcattcttgg
gaactgcagcagctgcatctgtcctaatactcttagggtcaggttctact
gccctaagttccaaccctgctccgtgagcacctagagctgttggcatctg
gagcttgctagcacttagggtcacagagaacagaaagctgggactgacat
gcttgtagactcttaggacccatcctgactgcaggatgaggcaaggggcc
ccacacaagagaccagcttggggtgatgtcagaaaggtggttcttctttt
gtccttcgaccagcttccttaaaacctctaaagggtaagaaggggtcttt
ccaagagaatggagtcacctttcatcctcctcttgtctcttgagttcagt
tgctgttgtttttaaggatctcttgaccttctttgctgggctagaaggag
caccttgagggtggtgaccttcaacactcaaactaacctctccccaatga
aacactggtgtctggaacttcatggtagactgggggaaggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_63933071_63934189
seq2: B6Ng01-205O08.b_49_1178

seq1  GAATTCTTTACCCTTTTGCCTCACTTTCCTAGGTGCTATGATTCCGTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACCCTTTTGCCTCACTTTCCTAGGTGCTATGATTCCGTGCA  50

seq1  TGCACCATCATACCTAACTTTATACGCCGTATTCTTTTCTTTATTTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCATCATACCTAACTTTATACGCCGTATTCTTTTCTTTATTTTTTA  100

seq1  GATTTATTTGTATTTACTGGTATGTTCATGTCTGTATGGATGTGTGTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTTGTATTTACTGGTATGTTCATGTCTGTATGGATGTGTGTCCT  150

seq1  ACCTGTGCGGGTGCCCACAGAGGCCAGAAGATGGGTAGGGTGACCTGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGCGGGTGCCCACAGAGGCCAGAAGATGGGTAGGGTGACCTGGAT  200

seq1  CTGGAGTTGCAAGGTAGACGTGAGGGCTGGGAACTGAACTTGGGTCTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTTGCAAGGTAGACGTGAGGGCTGGGAACTGAACTTGGGTCTTCA  250

seq1  GGACAAGTGGGGCACATTCTTAATTGTTGCACCGGCTCTCCAGCTCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAGTGGGGCACATTCTTAATTGTTGCACCGGCTCTCCAGCTCTGTG  300

seq1  TTCAGTGTTAATAGGTAAAGACAGCCTTCTTATCCTTATCACTGTTGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGTTAATAGGTAAAGACAGCCTTCTTATCCTTATCACTGTTGGAC  350

seq1  GCCCACTGTCCTGAGTGTAGGGATTTTGTTCCTCTCTTCTTAAAACATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACTGTCCTGAGTGTAGGGATTTTGTTCCTCTCTTCTTAAAACATTT  400

seq1  ATTATTTATTTATTGTGCATGTGCGTGTGTGCGTGTGTACAACTTGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTATTTATTGTGCATGTGCGTGTGTGCGTGTGTACAACTTGCCTG  450

seq1  AATTGCTTTTCTCCTTTTACCATGTGAATCCTAGGAATTGAACTCTGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTTTCTCCTTTTACCATGTGAATCCTAGGAATTGAACTCTGGTC  500

seq1  CTCAGACTTGGCACCAATCCCCTTTTCCCAATAAGCCATTTTGTTAGCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTTGGCACCAATCCCCTTTTCCCAATAAGCCATTTTGTTAGCCC  550

seq1  TGGTTCCTCTCTGGTACAGTGAAGAAGTCTAAAGGATTAGCTCTACTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCTCTCTGGTACAGTGAAGAAGTCTAAAGGATTAGCTCTACTCAG  600

seq1  AGCTCAAATACTCTCACTCGGATCAGTCCCCAAACCCATCTCTTCACTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAAATACTCTCACTCGGATCAGTCCCCAAACCCATCTCTTCACTGC  650

seq1  CTTCTGCTGAGGTGACTTCGGGTTCAGATTCCTTGAAACAGTTAAGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCTGAGGTGACTTCGGGTTCAGATTCCTTGAAACAGTTAAGGGAT  700

seq1  AGCAGCTACCTGATCCTCTTAGGCCCAAGCATAGCCAGCACAAACAGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTACCTGATCCTCTTAGGCCCAAGCATAGCCAGCACAAACAGCTT  750

seq1  TGCTCTAGAGTCTGAGCAGGACCAGTCTCCATTGCTGGACACAAGGGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTAGAGTCTGAGCAGGACCAGTCTCCATTGCTGGACACAAGGGAAT  800

seq1  AGCAAGGACTAAGTTTACTCTCTCATTAAGCAAATGAAAACCAGTACAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGACTAAGTTTACTCTCTCATTAAGCAAATGAAAACCAGTACAGG  850

seq1  CACATTAACAGGCTTTTAGACAAGGAGCAGCAGGTAGTGTAGGACAGGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAACAGGCTTTTAGACAAGGAGCAGCAGGTAGTGTAGGACAGGGA  900

seq1  CTTTGGAGAGAAGGGTTGCTCTGCCCTGTTTACTTGGGAGACCTTGGGCA  950
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  CTTTGGAGAGAAGGGTTGCTCTGCCCTG-TTACTTGGGAGACC-TGGGCA  948

seq1  TCTGCAGT-AGGGCAGCCCA--TGGGGAGCCTGGT-GGAG-AGGCACATG  995
      |||||||| |||||||||||   |||||| ||||| |||| |||||||||
seq2  TCTGCAGTAAGGGCAGCCCAATGGGGGAGTCTGGTGGGAGAAGGCACATG  998

seq1  G-AGGAGATGGCTTGGGAATTTCAAAGGGT-CAAGGTAGCCAGAGCTCAG  1043
      | |||||||||||| ||||||||||||||| |||||||||||||||||||
seq2  GAAGGAGATGGCTTTGGAATTTCAAAGGGTCCAAGGTAGCCAGAGCTCAG  1048

seq1  A-GCAGAGCAT-AGGT-GAGG-AGAGCTACCGAGAGCCCTGCAGAG-CCA  1088
      | ||||||||| |||| |||| ||||||||||||||||||||  || | |
seq2  ATGCAGAGCATAAGGTGGAGGAAGAGCTACCGAGAGCCCTGCCAAGTCAA  1098

seq1  TCAGGCTCTC-CTCCGT-CCTCTAGTAGAGACC  1119
      ||||| |||| |||||| | |||||||||||||
seq2  TCAGG-TCTCTCTCCGTACTTCTAGTAGAGACC  1130

seq1: chr14_64054239_64055351
seq2: B6Ng01-205O08.g_70_1213 (reverse)

seq1  CACTCC-TACCCCAGTCTACCCAGA--GTCCAGACA-CAGTGGTTCA-TG  45
      |||||| | ||||||||||||  ||   |||||||| ||||| |||| ||
seq2  CACTCCTTCCCCCAGTCTACCATGAAGTTCCAGACACCAGTGTTTCATTG  50

seq1  GGGAG-GGGTAGGTTGGGTGTTG-AGGTCAC--ACCTC-AGGTGCTCC-T  89
      ||||| || ||| ||| |||||| |||||||   |||| ||||||||| |
seq2  GGGAGAGGTTAGTTTGAGTGTTGAAGGTCACCACCCTCAAGGTGCTCCTT  100

seq1  CTAG-CCAGCAAGAAGGGTCAAGGAGCATCCTT-AAAACCACAGCAACTG  137
      |||| |||||||  | |||||| ||| |||||| ||||| ||||||||||
seq2  CTAGCCCAGCAAAGAAGGTCAA-GAG-ATCCTTAAAAACAACAGCAACTG  148

seq1  -ACTCAAGAGAC-AGAGGA-GATG-AAGGTGACT-CATTCTCTTGGAAAG  182
       ||||||||||| |||||| |||| ||||||||| |||||||||||||||
seq2  AACTCAAGAGACAAGAGGAGGATGAAAGGTGACTCCATTCTCTTGGAAAG  198

seq1  A-CCCTTC-TACCCTT---AGGGTTTTAGGGAGCTGGTCG-AGGAC-AAA  225
      | |||||| |||||||   ||| ||| ||| ||||||||| ||||| |||
seq2  ACCCCTTCTTACCCTTTAGAGGTTTTAAGGAAGCTGGTCGAAGGACAAAA  248

seq1  GA--GACCACC-TTCTGGCATCACCCCAAGCTGGTCTCTTGTGT-GGGCC  271
      ||   |||||| ||||| |||||||||||||||||||||||||| |||||
seq2  GAAGAACCACCTTTCTGACATCACCCCAAGCTGGTCTCTTGTGTGGGGCC  298

seq1  CCTTGCCTCATCCTGCAGTCAGGAT-GGTCCTAAGAGTCTACAAGCATGT  320
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCTTGCCTCATCCTGCAGTCAGGATGGGTCCTAAGAGTCTACAAGCATGT  348

seq1  CAGT-CCAGC-TTCTGTTCTCTGTGACCCTAAGTGCTAGC-AGCTCCAGA  367
      |||| ||||| ||||||||||||||||||||||||||||| |||||||||
seq2  CAGTCCCAGCTTTCTGTTCTCTGTGACCCTAAGTGCTAGCAAGCTCCAGA  398

seq1  TGCCAACAGCTCTAGGTGCTCACGGAGCAGGGTTGGAACTTAGGGCAGTA  417
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACAGCTCTAGGTGCTCACGGAGCAGGGTTGGAACTTAGGGCAGTA  448

seq1  GAACCTGACCCTAAGAGTATTAGGACAGATGCAGCTGCTGCAGTTCCCAA  467
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGACCCTAAGAGTATTAGGACAGATGCAGCTGCTGCAGTTCCCAA  498

seq1  GAATGAGGTGCAGGTGGTTAAGGAGGCTCTCACATCAGGCCCACCAGCAC  517
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGGTGCAGGTGGTTAAGGAGGCTCTCACATCAGGCCCACCAGCAC  548

seq1  TACCCACAGCTCTTTCCTCTTAACATCCCAGTTTTCCCCACTTGAAAACT  567
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACAGCTCTTTCCTCTTAACATCCCAGTTTTCCCCACTTGAAAACT  598

seq1  AAGCCAGAGCTGCCCACAAATGCCTACCCAGCTGGAGCCCTGCAATGGTG  617
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGAGCTGCCCACAAATGCCTACCCAGCTGGAGCCCTGCAATGGTG  648

seq1  TGGCACGCGAGCGCGCGAGCGCGCAGGTCAGTGCCAGTTGGTCTGACTTG  667
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACGCGAGCGCGCGAGCGCGCAGGTCAGTGCCAGTTGGTCTGACTTG  698

seq1  GTGGCTGCTGCTGGGATCAGGAACCCAAGACTTTCCTGGGTGGAGTGCAG  717
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGCTGCTGGGATCAGGAACCCAAGACTTTCCTGGGTGGAGTGCAG  748

seq1  CCCGCTTTCCCTGCCCATTCCCTCAGCGAACTGCTGACAGTGGCAAAGCC  767
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTTTCCCTGCCCATTCCCTCAGCGAACTGCTGACAGTGGCAAAGCC  798

seq1  ACGTTGCCATGCTTGGAGGGAGGGGGCAGTAAGACGGGACGGGACGGGAC  817
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGCCATGCTTGGAGGGAGGGGGCAGTAAGACGGGACGGGACGGGAC  848

seq1  ATAACTCTCTTTGCTTTGATCTTAATGGGAAAAAAAAGTTTGGGTTTGAT  867
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCTCTTTGCTTTGATCTTAATGGGAAAAAAAAGTTTGGGTTTGAT  898

seq1  TTCGCCTGGAGCTTGCTGAGAGTTCCTGACTGGGCTTGGCCTTGCACGGG  917
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCCTGGAGCTTGCTGAGAGTTCCTGACTGGGCTTGGCCTTGCACGGG  948

seq1  GAGGGAGAATCGGGGGTCTTTAGGACCCGGGTGCACTCGGACCAGCGGTG  967
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGAATCGGGGGTCTTTAGGACCCGGGTGCACTCGGACCAGCGGTG  998

seq1  CCGGGAGGCCGACCTGCCGCGGCTTGAATGGGAGGCGGGCGGCGGCGCCG  1017
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGAGGCCGACCTGCCGCGGCTTGAATGGGAGGCGGGCGGCGGCGCCG  1048

seq1  AGAGGCTGGCGGCGGACTAGCTCTACGGTCGCCAGGCAACCGCCCTGACG  1067
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTGGCGGCGGACTAGCTCTACGGTCGCCAGGCAACCGCCCTGACG  1098

seq1  CAACGCAAAAGAACGTCCCTTCAAAAAAGAACGGTGCGGAGAATTC  1113
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGCAAAAGAACGTCCCTTCAAAAAAGAACGGTGCGGAGAATTC  1144