BAC Information

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BAC

Clone NameB6Ng01-205P05
Chromosome14 (Build37)
Map Location 60,109,161 - 60,250,500
singlet/doubletdoublet
Overlap geneCab39l, Cdadc1, Tmem46
Upstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2
Downstream geneAtp8a2, LOC668162, LOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205P05.bB6Ng01-205P05.g
ACCGA025494GA025495
length1,1171,050
definitionB6Ng01-205P05.b B6Ng01-205P05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,249,384 - 60,250,500)(60,109,161 - 60,110,199)
sequence
gaattcacaccataaaatatttattaaaaatttaaaatgattttctcctg
ctttggttattaaaatctttgattcttatctgttggtaccaattgccatt
gataatgtaacattatcgctgtcatcatgagatgagaaacagatgacaga
aggcaagaagaagacgctgtgggtaggatggtataaaacaccaaacttca
cagttatttaacaaattttggctttgctagcagttgaaaattcacttaca
atgtatttaaactttttccataagtaaccaatgtacaaattcagttgaat
ttgataaattaaaaccttggcagtgaacacagagcttgttgaaggctgag
gagaaaagggatgccatgtctccctggggagcttttctctggatttcata
gctcctgctgctggaaaaataaaccatctgataacaagagcataaaaaag
ccttctgatttgcaaagtggttcacgtttgaggtttaagtgccacctcat
gtcccagtgacagcggacaacctatctgagcatctcctcagtacagttgt
ttttttactgatcttcatcggcccattgataatttcctgcccttgggact
atttagacaaggggatcccaaaactgggcagaacaaatgaaccaccaggc
tgtatcatgaggcaaagttgaaagtaacttggagagcagcagatgacagc
tcatgttttcaatggaaaacaaacaaacaaacaaacaaaacaaaaaccac
atccaattgcttcttctgtagagccaggaaataaaaagacaccatcaaaa
ggagaggaatggcttcaatgccactccacccccagaatgttgaatgtctt
ccttagaaatggacattttctttcaatttctgtactgtagaaaaatcact
taagatctctacacatggttatcaacaaaagcaccataatagcctccccc
tcccccaaaagccataaaaatagacagactatatcttttacatgaaatta
gacatgcctctgatgattgaggcctcatgactagggtcggagtccagatc
cgcttctttccataatattatataatttacatctcctttcagccttgaac
cactgattaaaaaagcc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaaggtatatact
tattaaaagaaaacgtgattgaaagaagctaacttgacggtgcgttgtgt
tggtggaattaattttcaccttctgcctttaccgaggttctaggattgaa
ctcaggtatcaagcttgcactttatcctcttagccggctcactcctgttt
tctgtgctgtgtctttctttatccattagaagacataagttaattatgtg
agttaactgtgtgatcgatgctgtggtgatcatgggatgcagatttccct
ttacacattgagttcagtccctttggagatgtctcctgcagtgaaatcag
tgaccaaccagttgataattctaccagtaactttttggggacctccatac
tatttcttgtcctaactatagcaattcctatgtcccctactagcacactg
gagttccctttctattgatatttctcactaacagtgttctttcatctgtc
tgtatttttgattagctttgtgtcacaatccattttgtgacctaattata
gagcctggtgtagtgcatgctctggcttcttgctcaagtgctcatcccac
cttccatgggctgtagtgtggcacaggtaggcagatgttaccagaacagg
agtggaaatagcttcagggaagttttcttggtgtcttgattcagttcttt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_60249384_60250500
seq2: B6Ng01-205P05.b_48_1164 (reverse)

seq1  GGCTTTTTTAAAATCAGT-GTTCAAGGCTGAAAGGAGATGTAAATTATAT  49
      |||||||||  ||||||| |||||||||||||||||||||||||||||||
seq2  GGCTTTTTT--AATCAGTGGTTCAAGGCTGAAAGGAGATGTAAATTATAT  48

seq1  AATTATTATGAAAAGAAGC-GATCTTGAACTCCGACCCTAGTCATGA-GC  97
      || ||||||| |||||||| |||| || ||||||||||||||||||| ||
seq2  AA-TATTATGGAAAGAAGCGGATC-TGGACTCCGACCCTAGTCATGAGGC  96

seq1  CTCAATCATCAGAGGCATGTCTTAATTTCATTGTAAAAGATATAGTCTGT  147
      ||||||||||||||||||||| |||||||| |||||||||||||||||||
seq2  CTCAATCATCAGAGGCATGTC-TAATTTCA-TGTAAAAGATATAGTCTGT  144

seq1  CTATTTTTAT-GCTTTTGGGGGA-GGGGAGGCTATTAT-GTGCTTTTGTT  194
      |||||||||| |||||||||||| |||||||||||||| |||||||||||
seq2  CTATTTTTATGGCTTTTGGGGGAGGGGGAGGCTATTATGGTGCTTTTGTT  194

seq1  GATAACCATGTGTAGAGATCTTAAGTGATTTTTCTACAGTACAGAAATTG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACCATGTGTAGAGATCTTAAGTGATTTTTCTACAGTACAGAAATTG  244

seq1  AAAGAAAATGTCCATTTCTAAGGAAGACATTCAACATTCTGGGGGTGGAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATGTCCATTTCTAAGGAAGACATTCAACATTCTGGGGGTGGAG  294

seq1  TGGCATTGAAGCCATTCCTCTCCTTTTGATGGTGTCTTTTTATTTCCTGG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTGAAGCCATTCCTCTCCTTTTGATGGTGTCTTTTTATTTCCTGG  344

seq1  CTCTACAGAAGAAGCAATTGGATGTGGTTTTTGTTTTGTTTGTTTGTTTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAGAAGAAGCAATTGGATGTGGTTTTTGTTTTGTTTGTTTGTTTG  394

seq1  TTTGTTTTCCATTGAAAACATGAGCTGTCATCTGCTGCTCTCCAAGTTAC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTCCATTGAAAACATGAGCTGTCATCTGCTGCTCTCCAAGTTAC  444

seq1  TTTCAACTTTGCCTCATGATACAGCCTGGTGGTTCATTTGTTCTGCCCAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACTTTGCCTCATGATACAGCCTGGTGGTTCATTTGTTCTGCCCAG  494

seq1  TTTTGGGATCCCCTTGTCTAAATAGTCCCAAGGGCAGGAAATTATCAATG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGATCCCCTTGTCTAAATAGTCCCAAGGGCAGGAAATTATCAATG  544

seq1  GGCCGATGAAGATCAGTAAAAAAACAACTGTACTGAGGAGATGCTCAGAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGATGAAGATCAGTAAAAAAACAACTGTACTGAGGAGATGCTCAGAT  594

seq1  AGGTTGTCCGCTGTCACTGGGACATGAGGTGGCACTTAAACCTCAAACGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTCCGCTGTCACTGGGACATGAGGTGGCACTTAAACCTCAAACGT  644

seq1  GAACCACTTTGCAAATCAGAAGGCTTTTTTATGCTCTTGTTATCAGATGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACTTTGCAAATCAGAAGGCTTTTTTATGCTCTTGTTATCAGATGG  694

seq1  TTTATTTTTCCAGCAGCAGGAGCTATGAAATCCAGAGAAAAGCTCCCCAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTCCAGCAGCAGGAGCTATGAAATCCAGAGAAAAGCTCCCCAG  744

seq1  GGAGACATGGCATCCCTTTTCTCCTCAGCCTTCAACAAGCTCTGTGTTCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACATGGCATCCCTTTTCTCCTCAGCCTTCAACAAGCTCTGTGTTCA  794

seq1  CTGCCAAGGTTTTAATTTATCAAATTCAACTGAATTTGTACATTGGTTAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAAGGTTTTAATTTATCAAATTCAACTGAATTTGTACATTGGTTAC  844

seq1  TTATGGAAAAAGTTTAAATACATTGTAAGTGAATTTTCAACTGCTAGCAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGAAAAAGTTTAAATACATTGTAAGTGAATTTTCAACTGCTAGCAA  894

seq1  AGCCAAAATTTGTTAAATAACTGTGAAGTTTGGTGTTTTATACCATCCTA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAATTTGTTAAATAACTGTGAAGTTTGGTGTTTTATACCATCCTA  944

seq1  CCCACAGCGTCTTCTTCTTGCCTTCTGTCATCTGTTTCTCATCTCATGAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGCGTCTTCTTCTTGCCTTCTGTCATCTGTTTCTCATCTCATGAT  994

seq1  GACAGCGATAATGTTACATTATCAATGGCAATTGGTACCAACAGATAAGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCGATAATGTTACATTATCAATGGCAATTGGTACCAACAGATAAGA  1044

seq1  ATCAAAGATTTTAATAACCAAAGCAGGAGAAAATCATTTTAAATTTTTAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGATTTTAATAACCAAAGCAGGAGAAAATCATTTTAAATTTTTAA  1094

seq1  TAAATATTTTATGGTGTGAATTC  1117
      |||||||||||||||||||||||
seq2  TAAATATTTTATGGTGTGAATTC  1117

seq1: chr14_60109161_60110199
seq2: B6Ng01-205P05.g_66_1115

seq1  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50

seq1  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150

seq1  AGATGCTGGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200

seq1  GGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA  250

seq1  GAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGC  300

seq1  ATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACATGCTCCACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACATGCTCCACTAT  350

seq1  GTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGGTATATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGGTATATACT  400

seq1  TATTAAAAGAAAACGTGATTGAAAGAAGCTAACTTGACGGTGCGTTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAGAAAACGTGATTGAAAGAAGCTAACTTGACGGTGCGTTGTGT  450

seq1  TGGTGGAATTAATTTTCACCTTCTGCCTTTACCGAGGTTCTAGGATTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAATTAATTTTCACCTTCTGCCTTTACCGAGGTTCTAGGATTGAA  500

seq1  CTCAGGTATCAAGCTTGCACTTTATCCTCTTAGCCGGCTCACTCCTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTATCAAGCTTGCACTTTATCCTCTTAGCCGGCTCACTCCTGTTT  550

seq1  TCTGTGCTGTGTCTTTCTTTATCCATTAGAAGACATAAGTTAATTATGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCTGTGTCTTTCTTTATCCATTAGAAGACATAAGTTAATTATGTG  600

seq1  AGTTAACTGTGTGATCGATGCTGTGGTGATCATGGGATGCAGATTTCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACTGTGTGATCGATGCTGTGGTGATCATGGGATGCAGATTTCCCT  650

seq1  TTACACATTGAGTTCAGTCCCTTTGGAGATGTCTCCTGCAGTGAAATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACATTGAGTTCAGTCCCTTTGGAGATGTCTCCTGCAGTGAAATCAG  700

seq1  TGACCAACCAGTTGATAATTCTACCAGTAACTTTTTGGGGACCTCCATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAACCAGTTGATAATTCTACCAGTAACTTTTTGGGGACCTCCATAC  750

seq1  TATTTCTTGTCCTAACTATAGCAATTCCTATGTCCCCTACTAGCACACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTGTCCTAACTATAGCAATTCCTATGTCCCCTACTAGCACACTG  800

seq1  GAGTTCCC-TTCTA-TGATA-TTCTCACTAACAGTGTTCTTTCATCTGTC  847
      |||||||| ||||| ||||| |||||||||||||||||||||||||||||
seq2  GAGTTCCCTTTCTATTGATATTTCTCACTAACAGTGTTCTTTCATCTGTC  850

seq1  TGTA-TTTTGATTAGC-TTGTGTCACAATCCA-TTTGTGACCTAATTATA  894
      |||| ||||||||||| ||||||||||||||| |||||||||||||||||
seq2  TGTATTTTTGATTAGCTTTGTGTCACAATCCATTTTGTGACCTAATTATA  900

seq1  GAGCCTGGTGTAGTGCATGCTCTGGCT--CTGCTCAGGTGCTCATCCCAC  942
      |||||||||||||||||||||||||||   |||||| |||||||||||||
seq2  GAGCCTGGTGTAGTGCATGCTCTGGCTTCTTGCTCAAGTGCTCATCCCAC  950

seq1  CTTCCATGGGCTGTAGTGTGGCACAGGTAGGCAGATGTTACCAGAACAGG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATGGGCTGTAGTGTGGCACAGGTAGGCAGATGTTACCAGAACAGG  1000

seq1  AGT-GAAATAGCTCCAGGGAAGTTTTCTT-GTGTC-TGATTCAGTTCTTT  1039
      ||| ||||||||| ||||||||||||||| ||||| ||||||||||||||
seq2  AGTGGAAATAGCTTCAGGGAAGTTTTCTTGGTGTCTTGATTCAGTTCTTT  1050