BAC Information

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BAC

Clone NameB6Ng01-206C11
Chromosome14 (Build37)
Map Location 8,287,313 - 8,288,460
singlet/doubletsinglet
Overlap geneLOC100042286
Upstream geneLOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC666957, LOC100042263
Downstream geneLOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206C11.bB6Ng01-206C11.g
ACCGA025642GA025643
length1,137637
definitionB6Ng01-206C11.b B6Ng01-206C11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccccacactgggttcatctagggctattggctcctgttcccaact
acttgaagttctcagtggtatctgcatacacaagaggattgggacaacca
ttttcaactcatcatggttcccaggaaattctgggtgcacaggactcccc
ctccccccaaccctgctgttttcagccagagaaacacagtctgggccccc
tgagactgtttcagccttccctgagcaatgtggctcagcactccaggggc
taggaagaaacacagcctaatatccctgagttttgccttccccaagcggc
acattggtggcattcctaacccccagagggaaggcagagacacagaatga
tgcctttactgtatgctgtcagcagggcatgatctctctgctctgttttt
gatatctgtgctcacagctatggggtatgaggcagaatgtcactgtggtt
gatttgcacttccttggtgcttagggataacaaacccttatcatagaaat
taacatttagagtcctacttgctatcatgtgccaccatacatcctaatag
atttattagttggtatgttaaatgactttttttttaattgcaatttcttt
cttagatctgctattgtggcaatattataaccaaagtaacttgggaagga
aagtttatttgacttatacttccacatcacagctcatcatggaaggaatc
tggacaggaactcaaacagtatagaaatctggagacaggagctgatgcag
aggccactgaggaatcctgcttactggcttgctcccttatggcttgctca
acctaatttcttatagaacctaggaccaccaggcaagtaacggccccacc
cacaatgggctgggcccacatccatcaatctaattaagaaaatgtcctat
aggtgtaccaacagcatgatttgtgttggcattttctccattggggtccc
tcctctcagataacttcagcttggtgccaagttgacattagttagcagca
gagattgttatggccaaaagttacctttccatgaaagcagtggattcagt
ggagtcatgtccctggagtcccttgacctcagcagtgccatcatgagacc
ccttagcaatgctctcacagaacatctttggacagtg
gaattctctgtttagctctgttccccatttttaatagggttatttggttc
tctggagttcttcttgagttctttttatagactggatattatcctttgat
agtatataggattggtaaagatcatttcccaatctgttggttgccatttt
gtttcattgacagggttctttgccatacaaaatgtttgcaattttttgag
gtcccatttgccgattgttgatattagttatctggagacaccaaacccag
acactattgttgatgccaagaaacacttgctgacaggaatctggtatgag
tgtcccctgaccaatacagatgcagatactcataggcaaccatctaactg
agcatgaggataccagtgaaagagctaggggaaggactgaaggagctgaa
gggggttgcatccccataggaagagcaatatcaactaactggaccacccc
atgctccaagagactaaaccatcaaccaaagagtatacatggagggatcc
atggctccagatacatatgtagcagaggatgaccttgttcggcattagtg
ggaggagaggcccttggtcctgtgcaggtttgatgacccagtgtaggggg
atgctaaaaggaagggtgggagtaggtgggggattcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8287313_8288460
seq2: B6Ng01-206C11.b_46_1182

seq1  GAATTCCCCACACTGGGTTCATCTAGGGCTACTGGCTCCTGTTCCCAACT  50
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAATTCCCCACACTGGGTTCATCTAGGGCTATTGGCTCCTGTTCCCAACT  50

seq1  ACTTGAAGTTCTCAGTGGTATCTGCGTACACAAGAGGATTGGGACAACCA  100
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACTTGAAGTTCTCAGTGGTATCTGCATACACAAGAGGATTGGGACAACCA  100

seq1  TTTTCAACTCATCATGGTTCCCAGGAAATTCTGGGTGCACAGGACTCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACTCATCATGGTTCCCAGGAAATTCTGGGTGCACAGGACTCCCC  150

seq1  ATCCCCCCAACCCTGCTGTTTTCAGCCAGAGAAACACAGGCTGGGCCCCC  200
       |||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTCCCCCCAACCCTGCTGTTTTCAGCCAGAGAAACACAGTCTGGGCCCCC  200

seq1  TGAGACTGTTTCAGCCTTCCCTGAGCAATGTGGCTCAGCACTCCAGGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTGTTTCAGCCTTCCCTGAGCAATGTGGCTCAGCACTCCAGGGGC  250

seq1  TAGGAAGAAACACAGCCTAATATCCCTGAGTTTTGCCTTCCCCAAGTGGC  300
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TAGGAAGAAACACAGCCTAATATCCCTGAGTTTTGCCTTCCCCAAGCGGC  300

seq1  ACATTGGTGGCATTCCTAACCCCCAGAGGGAAGGCAGAGACACAGAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGTGGCATTCCTAACCCCCAGAGGGAAGGCAGAGACACAGAATGA  350

seq1  TGCCTTTACTGTATGCTGTCAGCAGGGCCTGATCTCTCTGCTCTGTTTTT  400
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGCCTTTACTGTATGCTGTCAGCAGGGCATGATCTCTCTGCTCTGTTTTT  400

seq1  GATATCTGTGCTCACAGGTATGGGGTATGAGGCAGAATGTCACTGTGGTT  450
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GATATCTGTGCTCACAGCTATGGGGTATGAGGCAGAATGTCACTGTGGTT  450

seq1  GATTTGCACTTCCTTGGTGCTTAGGGATAACAAACCCTTATCATAGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGCACTTCCTTGGTGCTTAGGGATAACAAACCCTTATCATAGAAAT  500

seq1  TAACATTTAGAGTCCTACTTGCTATCATGTGCCACCATACATCCTAATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTAGAGTCCTACTTGCTATCATGTGCCACCATACATCCTAATAG  550

seq1  ATTTATTAGTTGGTATGTTAAATGACTTTTTTTTTAATTGCAATTTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAGTTGGTATGTTAAATGACTTTTTTTTTAATTGCAATTTCTTT  600

seq1  CTTAGATCTGCTATTGTGGCAATATTATAACCAAAGTAACTTGGGAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATCTGCTATTGTGGCAATATTATAACCAAAGTAACTTGGGAAGGA  650

seq1  AAGTTTATTTGACTTATACTTCCACATCACAGATCATCATGGAAGGAATC  700
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGTTTATTTGACTTATACTTCCACATCACAGCTCATCATGGAAGGAATC  700

seq1  TGGACAGGAACTCAAACAGTATAGAAATCTGGAGACAGGAGCTGATGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGGAACTCAAACAGTATAGAAATCTGGAGACAGGAGCTGATGCAG  750

seq1  AGGCCACTGAGGAATGCTGCTTACTGGCTTGCT-CCTTATGGCTTGCTCA  799
      ||||||||||||||| ||||||||||||||||| ||||||||||||||||
seq2  AGGCCACTGAGGAATCCTGCTTACTGGCTTGCTCCCTTATGGCTTGCTCA  800

seq1  ACCTAATTTCTTATAGAACCTAGGACCACCAGGCAAGTAACGGCCCCACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATTTCTTATAGAACCTAGGACCACCAGGCAAGTAACGGCCCCACC  850

seq1  CACAATGGGCTGGGCCCACATCCATCAATCTAATTAAGAAAATGTCCTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGGGCTGGGCCCACATCCATCAATCTAATTAAGAAAATGTCCTAT  900

seq1  AGGTGTACCAACAGCCTGATTTTGTGTTGGCATTTTCTCCATTGAGGTTC  949
      ||||||||||||||| ||| |||||||||||||||||||||||| || ||
seq2  AGGTGTACCAACAGCATGA-TTTGTGTTGGCATTTTCTCCATTG-GGGTC  948

seq1  CCTCCTCTCAGATAACTTCAGC-TGGTGCCAAGTTGACATTAAGTTAGCC  998
      |||||||||||||||||||||| |||||||||||||||||| |||||| |
seq2  CCTCCTCTCAGATAACTTCAGCTTGGTGCCAAGTTGACATT-AGTTAG-C  996

seq1  AGCAGAGAATTGTTATGGCCAAAAGTTACTTTTCCAATGAAAGCAGT-GA  1047
      ||||||| ||||||||||||||||||||| ||||| ||||||||||| ||
seq2  AGCAGAG-ATTGTTATGGCCAAAAGTTACCTTTCC-ATGAAAGCAGTGGA  1044

seq1  TTCAGTGAGTTCATGTCCCTGGAGTTCCCTGACATCAGCAAGTTGCCATC  1097
      |||||||   ||||||||||||||| || |||| ||||||   |||||||
seq2  TTCAGTGGAGTCATGTCCCTGGAGTCCCTTGACCTCAGCA--GTGCCATC  1092

seq1  ATCAGAACCCCCTTAGCAAATGCTCTCAACAGAACATTCTTTGAAACAGT  1147
      || |||  ||||||||| ||||||||| |||||||| ||||||  |||||
seq2  ATGAGA--CCCCTTAGC-AATGCTCTC-ACAGAACA-TCTTTG-GACAGT  1136

seq1  G  1148
      |
seq2  G  1137