BAC Information

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BAC

Clone NameB6Ng01-206O22
Chromosome14 (Build37)
Map Location 52,305,898 - 52,306,766
singlet/doubletsinglet
Overlap geneLOC667289
Upstream geneOlfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031
Downstream geneEG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206O22.bB6Ng01-206O22.g
ACCGA026218GA026219
length8721,154
definitionB6Ng01-206O22.b B6Ng01-206O22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcccttccaatttgtatcactttgatctgcttttttttttttt
ttttttttttttttttttgcctgattgctctggctaaaatgtcaaaaact
atgttgaatacataggggaagagggggaagtctttccttatctctgattt
taatgggattgcttcaaatttttctgcatatattttgatgttggcaactg
gattgctctatgttgctcttattatattcagatatagaccatgactttct
gattcctccaatgcatttatcttgaagtagtattgtattttgtcaaacac
tttttcagcatctgatgagattatccaataatatgttttaagttatttta
tatagtggattacattgatggatgtccatatattgaatcattcctacatc
cgtgggatgatacatctaatgagatgatcaagtaataatttctgctgatg
caaagttagaaaaagctctactaagtactcagcctgatgcacagagtcct
aaggggagacacagcaaatacagaggtctgaaggaaaggacaaagtaccc
aaaatctgagtatctaaggctttatcctcagattagaaagagaaaagaaa
aaatggagagggaacccagtaagtgacaatggggagaagggaggccaggt
ggtcctggtggtcatgaactctgcacagagttcacagcaaatttcaatgt
ggattatgaaagtagaaaatattcactttcttttattacgttcacccttg
tttagacagataatccatgcaggaaggctgaaaaagggctaagaaagaaa
gttgatctcagagaaacaggaggacttgggggttctctagtgtagtatac
ttgtagtttggtgtggtgctgt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcttca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaagtggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaatgctgacaccattgcatacactagcaagattttattgaaa
gggacccagatgtagctgtctcttgtgagagtatgcccggggcctagcaa
acacagaaagtggatgctcacagtcagctaatggatggatcatagtgctc
caatggaggagctagagaaagtagccaaggagctaaagggatctgcaacc
tatagtgatacattatgactacagtacccgagctctgactctagctgcat
atgttatcaaggatgctagtcgccatcactgcagaagtcatggaacttgc
cacttaattgcagttcgatccaggtcattggaatgggtggtctagggcaa
gttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_52305898_52306766
seq2: B6Ng01-206O22.b_50_921

seq1  GAATTCCTCCCTTCCAATTTGTATCACTTTGATCTGCTTTTTTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCTTCCAATTTGTATCACTTTGATCTGCTTTTTTTTTTTTT  50

seq1  TTTTTTTTTTTTTTTTTTGCCTGATTGCTCTGGCTAAAATGTCAAAGACT  100
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTTTTTTTTTTTTTTTTGCCTGATTGCTCTGGCTAAAATGTCAAAAACT  100

seq1  ATGTTGAATACATAGGGGAAGAGGGGGAAGTCTTTCCTTATCTCTGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAATACATAGGGGAAGAGGGGGAAGTCTTTCCTTATCTCTGATTT  150

seq1  TAATGGGATTGCTTCAAATTTTTCTGCATATATTTTGATGTTGGCAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGGATTGCTTCAAATTTTTCTGCATATATTTTGATGTTGGCAACTG  200

seq1  GATTGCTCTATGTTGCTCTTATTATATTCAGATATAGACCATGACTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCTCTATGTTGCTCTTATTATATTCAGATATAGACCATGACTTTCT  250

seq1  GATTCCTCCAATGCATTTATCTTGAAGTAGTATTGTATTTTGTCAAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTCCAATGCATTTATCTTGAAGTAGTATTGTATTTTGTCAAACAC  300

seq1  TTTTTCAGCATCTGATGAGATTATCCAATAATATGTTTTAAGTTATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGCATCTGATGAGATTATCCAATAATATGTTTTAAGTTATTTTA  350

seq1  TATAGTGGATTACATTGATGGATGTCCATATATTGAATCATTCCTACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGGATTACATTGATGGATGTCCATATATTGAATCATTCCTACATC  400

seq1  CGTGGGATGATACATCTAATGAGATGATCAAGTAATAATTTCTGCTGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGATGATACATCTAATGAGATGATCAAGTAATAATTTCTGCTGATG  450

seq1  CAGAGTTAGAAAAAGCTCTACTAAGTACTCAGCCTGATGCACAGAGTCCT  500
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTAGAAAAAGCTCTACTAAGTACTCAGCCTGATGCACAGAGTCCT  500

seq1  AAGGGGAGACACAGCAAATACAGAGGTCTGAAGGAAAGGACAAAGTACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGAGACACAGCAAATACAGAGGTCTGAAGGAAAGGACAAAGTACCC  550

seq1  AAAATCTGAGTATCTAAGGCTTTATCCTCAGATTAGAAAGAGAAAAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTGAGTATCTAAGGCTTTATCCTCAGATTAGAAAGAGAAAAGAAA  600

seq1  AAATGGAGAGGGAACCCAGTAAGTGACAATGGGGAGAAGGGAGGCCAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGAGGGAACCCAGTAAGTGACAATGGGGAGAAGGGAGGCCAGGT  650

seq1  GGTCCTGGTGGTCATGAACTCTGCACAGAGTTCACAGCAAATTTCAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGGTGGTCATGAACTCTGCACAGAGTTCACAGCAAATTTCAATGT  700

seq1  GGATTATGAAAGTAGAAAATATTCACTTTCTTTTATTACGTTCA-CCTTG  749
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGATTATGAAAGTAGAAAATATTCACTTTCTTTTATTACGTTCACCCTTG  750

seq1  TTTAGACAGATAATCCATGCAGGAAGGCTGAGAAAGGGCTAAGAAAGAAA  799
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTAGACAGATAATCCATGCAGGAAGGCTGAAAAAGGGCTAAGAAAGAAA  800

seq1  GTTGATCTCAGAGAAACAGGAGGAC-TGGGGGTTCTCTAGTGTAGTATAC  848
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTTGATCTCAGAGAAACAGGAGGACTTGGGGGTTCTCTAGTGTAGTATAC  850

seq1  -TGTAGTTTGGTGTGGTGCTGT  869
       |||||||||||||||||||||
seq2  TTGTAGTTTGGTGTGGTGCTGT  872