MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-207J04
Chromosome	14 (Build37)
Map Location	77,213,795 - 77,394,548
singlet/doublet	doublet
Overlap gene	LOC100043753, LOC100043201
Upstream gene	LOC100043189, Tpt1, LOC100038852, Gtf2f2, LOC668504, Kctd4, 1200011I18Rik, Nufip1, LOC100043752, 2900040C04Rik, Tsc22d1, 2810032E02Rik
Downstream gene	9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678, Gm1587, Dnajc15, Epsti1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100043189 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043189
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Tpt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22070 MGI:104890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038852 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtf2f2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68705 MGI:1915955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668504 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 36 ESTs, 13 Proteins pseudo : _no_value

name	Kctd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67516 MGI:1914766
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1200011I18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67467 MGI:1914717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nufip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27275 MGI:1351474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043752 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 mRNAs, 1291 ESTs, 8 Proteins

name	2900040C04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72893 MGI:1920143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Tsc22d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21807 MGI:109127
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2810032E02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72661 MGI:1919911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 4 Proteins

name	LOC100043753 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100043201 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043201
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	9030625A04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210808 MGI:2445077
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc122 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108811 MGI:1918358
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D230005D02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239188 MGI:2444896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043755 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1103 ESTs, 9 Proteins

name	LOC676171 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein pseudo : _no_value

name	EG629678 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629678 MGI:3647788
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm1587 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380920 MGI:2686433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnajc15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66148 MGI:1913398
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epsti1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108670 MGI:1915168
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100043189 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265680 GeneID:100043189
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043189 transcript_id : XM_001479710.1

name	Tpt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59276013 GeneID:22070 MGI:104890
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein, translationally-controlled 1 transcript_id : NM_009429.2

name	LOC100038852 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265368 GeneID:100038852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100038852 transcript_id : XM_001471928.1

name	Gtf2f2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351202 GeneID:68705 MGI:1915955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor IIF, polypeptide 2 transcript_id : NM_026816.3

name	Kctd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50980304 GeneID:67516 MGI:1914766
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel tetramerisation domain containing 4 transcript_id : NM_026214.3

name	1200011I18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71043962 GeneID:67467 MGI:1914717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200011I18 gene transcript_id : NM_026177.3

name	Nufip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369325 GeneID:27275 MGI:1351474
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear fragile X mental retardation protein interacting protein 1 transcript_id : NM_013745.3

name	LOC100043752 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265802 GeneID:100043752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 mRNAs, 1291 ESTs, 8 Proteins product : similar to ribosomal protein S2 transcript_id : XM_001480887.1

name	2900040C04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265804 GeneID:72893 MGI:1920143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 2900040C04 gene transcript_id : XM_001480889.1

name	Tsc22d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46559425 GeneID:21807 MGI:109127
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TSC22 domain family, member 1 transcript_id : NM_207652.1

name	Tsc22d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47777349 GeneID:21807 MGI:109127
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TSC22 domain family, member 1 transcript_id : NM_009366.2

name	2810032E02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265684 GeneID:72661 MGI:1919911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 4 Proteins product : RIKEN cDNA 2810032E02 gene transcript_id : XM_894566.3

name	LOC100043753 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265806 GeneID:100043753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043753 transcript_id : XM_001480898.1

name	9030625A04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367146 GeneID:210808 MGI:2445077
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9030625A04 gene transcript_id : NM_172488.2

name	Ccdc122 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365913 GeneID:108811 MGI:1918358
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 122 transcript_id : NM_175369.3

name	D230005D02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385662 GeneID:239188 MGI:2444896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D230005D02 gene transcript_id : NM_172813.2

name	LOC100043755 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265808 GeneID:100043755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1103 ESTs, 9 Proteins product : similar to ribosomal protein L23a transcript_id : XM_001480900.1

name	EG629678 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702321 GeneID:629678 MGI:3647788
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG629678 transcript_id : NM_001037935.1

name	Gm1587 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345793 GeneID:380920 MGI:2686433
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1587, (NCBI) transcript_id : NM_001033440.2

name	Dnajc15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982148 GeneID:66148 MGI:1913398
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily C, member 15 transcript_id : NM_025384.3

name	Epsti1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30519880 GeneID:108670 MGI:1915168
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epithelial stromal interaction 1 (breast) transcript_id : NM_029495.1

name	Epsti1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363869 GeneID:108670 MGI:1915168
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epithelial stromal interaction 1 (breast) transcript_id : NM_178825.2

name	LOC100043189 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265681 GeneID:100043189
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479760.1

name	LOC100038852 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265369 GeneID:100038852
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001471978.1

name	Tpt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678437 GeneID:22070 MGI:104890
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005615 - extracellular space [Evidence ISS]; GO:0005771 - multivesicular body [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence IEA]; GO:0005515 - protein binding [Evidence IDA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA] codon_start : 1 note : fortilin; 21 kDa polypeptide under translational control; snoRNA MBI-161; translationally regulated transcript (21 kDa) product : tumor protein, translationally-controlled 1 protein_id : NP_033455.1

name	Gtf2f2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930425 GeneID:68705 MGI:1915955
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : general transcription factor IIF, polypeptide 2 protein_id : NP_081092.1

name	Kctd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50980305 CCDS:CCDS27282.1 GeneID:67516 MGI:1914766
definition	codon_start : 1 product : potassium channel tetramerisation domain containing 4 protein_id : NP_080490.3

name	1200011I18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754089 CCDS:CCDS27283.1 GeneID:67467 MGI:1914717
definition	codon_start : 1 product : hypothetical protein LOC67467 protein_id : NP_080453.2

name	Nufip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305335 CCDS:CCDS27284.1 GeneID:27275 MGI:1351474
definition	GO_component : GO:0005830 - cytosolic ribosome (sensu Eukaryota) [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0016363 - nuclear matrix [Evidence ISS]; GO:0005730 - nucleolus [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA]; GO:0005726 - perichromatin fibrils [Evidence ISS]; GO:0048786 - presynaptic active zone [Evidence ISS]; GO:0008023 - transcription elongation factor complex [Evidence ISS] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003723 - RNA binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS] codon_start : 1 note : nuclear FMRP interacting protein product : nuclear fragile X mental retardation protein interacting protein protein_id : NP_038773.1

name	LOC100043752 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265803 GeneID:100043752
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480937.1

name	2900040C04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265805 GeneID:72893 MGI:1920143
definition	codon_start : 1 product : hypothetical protein LOC72893 protein_id : XP_001480939.1

name	Tsc22d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46559426 CCDS:CCDS27285.1 GeneID:21807 MGI:109127
definition	GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; transforming growth factor beta 1 induced transcript 4 product : transforming growth factor beta 1 induced transcript 4 isoform 1 protein_id : NP_997535.1

name	Tsc22d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678315 CCDS:CCDS27286.1 GeneID:21807 MGI:109127
definition	GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; transforming growth factor beta 1 induced transcript 4 product : transforming growth factor beta 1 induced transcript 4 isoform 2 protein_id : NP_033392.1

name	2810032E02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265685 GeneID:72661 MGI:1919911
definition	codon_start : 1 product : hypothetical protein LOC72661 protein_id : XP_899659.3

name	LOC100043753 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265807 GeneID:100043753
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480948.1

name	9030625A04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369672 CCDS:CCDS27287.1 GeneID:210808 MGI:2445077
definition	codon_start : 1 product : hypothetical protein LOC210808 protein_id : NP_766076.1

name	Ccdc122 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425072 CCDS:CCDS27288.1 GeneID:108811 MGI:1918358
definition	codon_start : 1 product : coiled-coil domain containing 122 protein_id : NP_780578.1

name	LOC100043755 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265809 GeneID:100043755
definition	codon_start : 1 product : similar to ribosomal protein L23a protein_id : XP_001480950.1

name	EG629678 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702322 GeneID:629678 MGI:3647788
definition	codon_start : 1 product : hypothetical protein LOC629678 protein_id : NP_001033024.1

name	D230005D02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370212 CCDS:CCDS27290.1 GeneID:239188 MGI:2444896
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC239188 protein_id : NP_766401.1

name	Gm1587 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701957 GeneID:380920 MGI:2686433
definition	codon_start : 1 product : hypothetical protein LOC380920 protein_id : NP_001028612.1

name	Dnajc15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384760 CCDS:CCDS27292.1 GeneID:66148 MGI:1913398
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : DnaJ (Hsp40) homolog, subfamily D, member 1 protein_id : NP_079660.1

name	Epsti1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519881 GeneID:108670 MGI:1915168
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform a is encoded by transcript variant a product : epithelial stromal interaction 1 isoform a protein_id : NP_083771.1

name	Epsti1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281909 GeneID:108670 MGI:1915168
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform b is encoded by transcript variant b product : epithelial stromal interaction 1 isoform b protein_id : NP_849147.1

name	LOC100043201 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043201
definition	number : 1 pseudo : _no_value

name	LOC100043201 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043201
definition	number : 2 pseudo : _no_value

name	LOC100043201 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043201
definition	number : 3 pseudo : _no_value

name	LOC668504 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265801 GeneID:668504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 36 ESTs, 13 Proteins product : similar to SVH protein pseudo : _no_value transcript_id : XR_034885.1

name	LOC676171 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265810 GeneID:676171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : similar to Hmgb1-rs17 protein pseudo : _no_value transcript_id : XR_034899.1

clone name	MSMg01-277A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383P03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-279A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155B02
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-207J04.b	B6Ng01-207J04.g
ACC	GA026683	GA026684
length	1,078	928
definition	B6Ng01-207J04.b	B6Ng01-207J04.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(77,213,795 - 77,214,857)	(77,393,961 - 77,394,548)
sequence	gaattctattcagcaacaatactgtggcagtgttttctctgcctttgtcc acgttaagtcactgtcctgagggaacagattttattccattatcattatt atggttctgtcctgtcagcaaattgttgggagctttgctcctcattcctt ttgatttttaaatagatttatcttagaaaatttagttaaattaaccttaa catctaactcagttactgcccgtacccagcttctacacagcaggcagtga gctgtagcaactgctgcctgcttgtgcatctctggccatcctctaatccc tcccctccccaggtggcttgttttgctgcttcactgtaaaatcaccaaga catgcagttctgcttcttgcctagaatatctggacatctggggtccaaca gtatgcttgtgacaacaaattctcttacagtcgtttaaacctttccagag tgttcttaagatagcctcctcttttctggcccagattcgacctttggtga acacctctacccacagtgtgctggtcacatacagctttcccatggtgttt tatttacccccaagaagaatctagatggagcggtgttattgagctcattt taaaggataacaaaacaaaacaaatacaaaaaaaaatacaagtcaaaaca actgaagagcttctaatgatgtacgaggatcacagaataacaagggctga ggttaaattaggtcccgctctcttgcttccaaggcttgttgattaaggca ttgaaaataactgcctgaccacacccacaagctcccatcttaggcatgga atttctgcattttttttcttctccaatagatgtatagatatattaatcct aactcaagggtgccatgttagttgattctagattaaataagaccctgccc caaagaattgtagacatgattttaatggaagtagatgggagaaatgccat tgtaaccagctgttccagattgccctttgtacattccccccaatgctgtg tttattcagggacaaatgtttcttcataaagtccccgtaatttccaaaaa actcttaatggaattaattggagtctgg	gaattccagaagaccaggctagactctgaacattgtttgccttccttgaa cctgagcattggagctgggttggaccttatttcccagttgctttcactgt aaaagctgttacaaacatttcagtagatcgctgatagaataaaactagga aaaaatgtgcatggctcaagttctgcttccataatggctcagagagtgat ttacataatctataggagatgaatatctttggagaatgttgtcttcttac tacttttaatttttattttgtttttaactatttacttatgtatttttgaa gcaaggtcttgctttgtagccctggcctatccagaacttgatatgtagcc caggttggcctcaaggaggagataatcctcctgcctttgcctctgaagtg ctgggatcgcaggcatgcaccaccagacctgggttcttaatactgacata tggtcaaacatatttatggattgtagtttgctattgcaggtatgtgtaga atgtataatgatcaaataaaagtggtgactacttctccccttttatcatt tcctgaagcgtttgaatttgtcttttctagttcttcatagaacatataat agatttgaagggatgtctagccttttgatgttgtgtcacaaatgatgtca tctataaagttcatgactgaaaaccattaaataaaattacaaaagaagaa aaatgaaaaaacaaaaaagcaacttctcataaggtttcgagtaagttttc atggtgaatcacattcatagttaccctgaagccaatgcagtccgctggct tttaggttgggcacagtgttaaacaactttgcctcctggcactttaaaac actgtgaattattcttcccatctaactgcttgtgtcccggatctaaactt ctttaattctgctccctttcctaggctc
quality values	Open. 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Hide. 62 47 56 47 62 62 39 37 56 62 62 56 47 39 54 39 51 56 56 47 45 56 47 47 62 62 62 62 47 62 59 62 59 62 62 59 56 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 44 59 59 59 59 59 50 46 56 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 59 59 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 59 59 59 59 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 51 59 59 59 62 62 62 62 62 62 62 62 49 62 59 59 49 35 44 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 56 54 62 62 62 62 62 54 62 62 62 62 62 62 56 62 47 56 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 54 62 62 62 62 62 56 62 62 56 62 41 47 47 62 62 47 62 47 47 47 36 46 56 56 56 62 62 62 62 62 62 47 54 62 47 47 54 50 62 50 43 52 52 62 62 62 62 62 62 62 62 52 62 62 54 62 62 52 62 62 54 62 62 62 50 62 54 42 52 62 62 62 62 62 62 58 58 41 54 58 58 58 54 58 42 45 50 54 54 58 45 58 58 46 54 52 42 58 54 52 50 52 52 54 45 58 58 41 54 20 9 52 13 28 52 54 42 58 58 32 37 52 52 54 54 52 50 52 39 23 45 45 36 41 48 26 45 35 54 52 50 54 39 50 35 50 33 50 42 46 52 42 47 50 27 50 40 50 47 37 37 50 22 48 47 30 10 45 44 50 37 58 49 34 21 51 52 37 42 22 23 37 32 46 50 27 26 27 32 27 32 24 30 50 41 33 39 37 42 49 37 50 54 48 46 58 51 54 58 16 18 39 40 41 31 30 30 37 50 31 40 50 50 43 30 27 49 12 27 51 47 53 53 39 49 27 45 32 12 6 29 32 54 38 33 13 27 28 39 30 20 14 41 54 32 21 20 12 34 37 54 35 42 39 51 24 29 36 33 31 51 31 37 34 31 28 33 29 25 14 41 37 22 9 14 29 35 15 35 32 15 32 17 19 17 17 33 39 31 21 13 21 9 18 15 15 24 29 36 32 20 9 21 6 31 32 40 18 11 26 34 33 28 27 21 6 7 22 45 45 30 40 18 14 24 51 14 41 21 45 30 22 22 28 31 25 22 15 16 18 31 32 24 40 37 18 22 32 21 9 23 12 28 30 31 30 46 31 24 33 18 20 46 38 46 27 30 31 31 25 31 31 28 26 42 18 33 24 29 8 34 9 35 39 7 8 6 5 5 23 13 24 18 12 26 8 39 14 16 31 33 12 9 29 16 11 9 19 20 31 28 39 27 8 21 28 19 9 7 10 16 38 19 10 23

Alignment Information

BAC End 1

BAC End 2

seq1: chr14_77213795_77214857
seq2: B6Ng01-207J04.b_47_1124

seq1  GAATTCTATTCAGCAACAATACTGTGGCAGTGTTTTCTCTGCCTTTGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTCAGCAACAATACTGTGGCAGTGTTTTCTCTGCCTTTGTCC  50

seq1  ACGTTAAGTCACTGTCCTGAGGGAACAGATTTTATTCCATTATCATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTAAGTCACTGTCCTGAGGGAACAGATTTTATTCCATTATCATTATT  100

seq1  ATGGTTCTGTCCTGTCAGCAAATTGTTGGGAGCTTTGCTCCTCATTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCTGTCCTGTCAGCAAATTGTTGGGAGCTTTGCTCCTCATTCCTT  150

seq1  TTGATTTTTAAATAGATTTATCTTAGAAAATTTAGTTAAATTAACCTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTTAAATAGATTTATCTTAGAAAATTTAGTTAAATTAACCTTAA  200

seq1  CATCTAACTCAGTTACTGCCCGTACCCAGCTTCTACACAGCAGGCAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAACTCAGTTACTGCCCGTACCCAGCTTCTACACAGCAGGCAGTGA  250

seq1  GCTGTAGCAACTGCTGCCTGCTTGTGCATCTCTGGCCATCCTCTAATCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGCAACTGCTGCCTGCTTGTGCATCTCTGGCCATCCTCTAATCCC  300

seq1  TCCCCTCCCCAGGTGGCTTGTTTTGCTGCTTCACTGTAAAATCACCAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCCCCAGGTGGCTTGTTTTGCTGCTTCACTGTAAAATCACCAAGA  350

seq1  CATGCAGTTCTGCTTCTTGCCTAGAATATCTGGACATCTGGGGTCCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGTTCTGCTTCTTGCCTAGAATATCTGGACATCTGGGGTCCAACA  400

seq1  GTATGCTTGTGACAACAAATTCTCTTACAGTCGTTTAAACCTTTCCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCTTGTGACAACAAATTCTCTTACAGTCGTTTAAACCTTTCCAGAG  450

seq1  TGTTCTTAAGATAGCCTCCTCTTTTCTGGCCCAGATTCGACCTTTGGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTAAGATAGCCTCCTCTTTTCTGGCCCAGATTCGACCTTTGGTGA  500

seq1  ACACCTCTACCCACAGTGTGCTGGTCACATACAGCTTTCCCATGGTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTCTACCCACAGTGTGCTGGTCACATACAGCTTTCCCATGGTGTTT  550

seq1  TATTTACCCCCAAGAAGAATCTAGATGGAGCGGTGTTATTGAGCTCATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACCCCCAAGAAGAATCTAGATGGAGCGGTGTTATTGAGCTCATTT  600

seq1  TAAAGGATAACAAAACAAAACAAATACAAAAAAAAATACAAGTCAAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGATAACAAAACAAAACAAATACAAAAAAAAATACAAGTCAAAACA  650

seq1  ACTGAAGAGCTTCTAATGATGTACGAGGATCACAGAATAACAAGGGCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGAGCTTCTAATGATGTACGAGGATCACAGAATAACAAGGGCTGA  700

seq1  GGTTAAATTAGGTCCCGCTCTCTTGCTTCCAAGGCTTGTTGATTAAGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAATTAGGTCCCGCTCTCTTGCTTCCAAGGCTTGTTGATTAAGGCA  750

seq1  TTGAAAATAACTGCCTGACCACACCCACAAGCTCCCATCTTAGGCATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATAACTGCCTGACCACACCCACAAGCTCCCATCTTAGGCATGGA  800

seq1  A-TTCTGCA-TTTTTTTCTTCTCCAATAGATGTATAAGATATATTAAT-C  847
      | ||||||| ||||||||||||||||||||||||| |||||||||||| |
seq2  ATTTCTGCATTTTTTTTCTTCTCCAATAGATGTAT-AGATATATTAATCC  849

seq1  TAACTCAA-GGTGCCATG-TAGTTGATTTCTAAGATAAAATAAGA-CCTG  894
      |||||||| ||||||||| ||||||| |||| |||| |||||||| ||||
seq2  TAACTCAAGGGTGCCATGTTAGTTGA-TTCT-AGATTAAATAAGACCCTG  897

seq1  CCCAAAAGAATTGTAGACATGATTTTAATGGAAG-AGAAGGGAGAAATGC  943
      ||| |||||||||||||||||||||||||||||| ||| |||||||||||
seq2  CCCCAAAGAATTGTAGACATGATTTTAATGGAAGTAGATGGGAGAAATGC  947

seq1  CA-TGTAACCAGCTG-TCCAGA-TGCCC-TTGTACATCCCCCCAAATGCT  989
      || |||||||||||| |||||| ||||| |||||||| ||||| ||||||
seq2  CATTGTAACCAGCTGTTCCAGATTGCCCTTTGTACATTCCCCCCAATGCT  997

seq1  GTGTTTA-TCAGGGAC--ATTGTTCTTCATTAAGTCCCCCTGGTTTCC-A  1035
      ||||||| ||||||||  ||  |||||||| |||||||| |  ||||| |
seq2  GTGTTTATTCAGGGACAAATGTTTCTTCATAAAGTCCCCGTAATTTCCAA  1047

seq1  AAAACTCTTA--TGAATAAATT-GAGTCTGG  1063
      ||||||||||   |||| |||| ||||||||
seq2  AAAACTCTTAATGGAATTAATTGGAGTCTGG  1078

seq1: chr14_77393961_77394548
seq2: B6Ng01-207J04.g_68_655 (reverse)

seq1  ATGAAGAACTAGAAAAGACAAATTCAAACGCTTCAGGAAATGATAAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAACTAGAAAAGACAAATTCAAACGCTTCAGGAAATGATAAAAGG  50

seq1  GGAGAAGTAGTCACCACTTTTATTTGATCATTATACATTCTACACATACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGTAGTCACCACTTTTATTTGATCATTATACATTCTACACATACC  100

seq1  TGCAATAGCAAACTACAATCCATAAATATGTTTGACCATATGTCAGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAGCAAACTACAATCCATAAATATGTTTGACCATATGTCAGTATT  150

seq1  AAGAACCCAGGTCTGGTGGTGCATGCCTGCGATCCCAGCACTTCAGAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCCAGGTCTGGTGGTGCATGCCTGCGATCCCAGCACTTCAGAGGC  200

seq1  AAAGGCAGGAGGATTATCTCCTCCTTGAGGCCAACCTGGGCTACATATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGGAGGATTATCTCCTCCTTGAGGCCAACCTGGGCTACATATCA  250

seq1  AGTTCTGGATAGGCCAGGGCTACAAAGCAAGACCTTGCTTCAAAAATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGGATAGGCCAGGGCTACAAAGCAAGACCTTGCTTCAAAAATACA  300

seq1  TAAGTAAATAGTTAAAAACAAAATAAAAATTAAAAGTAGTAAGAAGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAATAGTTAAAAACAAAATAAAAATTAAAAGTAGTAAGAAGACAA  350

seq1  CATTCTCCAAAGATATTCATCTCCTATAGATTATGTAAATCACTCTCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCCAAAGATATTCATCTCCTATAGATTATGTAAATCACTCTCTGA  400

seq1  GCCATTATGGAAGCAGAACTTGAGCCATGCACATTTTTTCCTAGTTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTATGGAAGCAGAACTTGAGCCATGCACATTTTTTCCTAGTTTTAT  450

seq1  TCTATCAGCGATCTACTGAAATGTTTGTAACAGCTTTTACAGTGAAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCAGCGATCTACTGAAATGTTTGTAACAGCTTTTACAGTGAAAGCA  500

seq1  ACTGGGAAATAAGGTCCAACCCAGCTCCAATGCTCAGGTTCAAGGAAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGAAATAAGGTCCAACCCAGCTCCAATGCTCAGGTTCAAGGAAGGC  550

seq1  AAACAATGTTCAGAGTCTAGCCTGGTCTTCTGGAATTC  588
      ||||||||||||||||||||||||||||||||||||||
seq2  AAACAATGTTCAGAGTCTAGCCTGGTCTTCTGGAATTC  588

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information