BAC Information

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BAC

Clone NameB6Ng01-207P21
Chromosome14 (Build37)
Map Location 56,920,637 - 56,921,471
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628176, LOC100042729, EG667952, Dhrs4, BC036313, Cpne6, Nrl, Pck2, Wdr23, 1110028A07Rik, Psme1, 1500005A01Rik, Psme2, Rnf31, Isgf3g, Rec8L1, Ipo4, Tm9sf1, Tssk4, 1810034K20Rik, Nedd8, Gmpr2, Tinf2, Tgm1, Rabggta, Dhrs1, 2610027L16Rik, Cideb, Ltb4r2, Ltb4r1, Adcy4, Ripk3, Nfatc4, BC030046, Cbln3, 9130227C08Rik, 2310014G06Rik, Cma1, Cma2, LOC100042759, EG545056, Mcpt1, Mcpt9, Mcpt2, Mcpt4, Mcpt8, Ctsg, Gzme, Gzmd, Gzmg, LOC672095, Gzmn, LOC100042770, LOC668072, LOC668074, Gzmf, Gzmc, LOC219102, Gzmb, LOC668082
Downstream geneAtp12a, Rnf17, Cenpj, Parp4, LOC100042788, 4930548G07Rik, Pspc1, LOC100043499, 9830124H08Rik, LOC100042797, LOC219106, LOC668118, Zmym2, LOC100042817, B020004C17Rik, Gja3, Gjb2, LOC100043515, Gjb6, LOC668140, Cryl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207P21.bB6Ng01-207P21.g
ACCGA026991GA026992
length9591,181
definitionB6Ng01-207P21.b B6Ng01-207P21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcgtgctgaggctcgctgaaaataaatatcatctgggagacaca
cataagatttatacagcaatccccttctctggcttgttttccatagttta
agttaacaatggtcaactatggtctaaagatgcaaatataaaattccata
aacaatacatatgacttaatttcattataattgctctaatttattattag
ttattgccattgatatctttcaaattatgtttaatagagaatttcataca
tgcatataatgtgttttgaccaaattattcctgagactttccccttccaa
ctctctcctttaaaaaaaaaaaaatcccagagttcgcatgcctatatgca
catgggtataggatctcaagggtcacatccctaaaataaatggatcctcc
ctcccccacaaagccatcaattgtcaatggcttctcaggtagccatggga
gttcatgaggtcctcccacttccatgcaggaattttggcagcttgatcga
tctggcaccggtcttgtgcattcagtcacagtcactatgagttcatgtgt
gcactggccctgtcatgttcaacaaatactgtttcactgaaaatgtctat
tccctgtggctctcacagtcttcccagatcctcttccatggtgatctctg
agccttggtagaagcaggtgtgatataaatgtcttggttagagttgaaca
ttccactgacttttattcgctacacaatggccagttggttgtaggtctct
gtattaatcacagtctactgaagaagaaaaaaataagcttctttgatgaa
gattgataaatgcactaattttttagtataaagataagaacttaaaggag
cagtttattattagggccatctagcagaataataatactagattcaccac
ccctggggcttctgacttagccagccatgatttatcccccccaattaatg
gtacctacc
gaattctcacctgaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaacccagagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagagcaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctta
gaaaattggacatagtactaccggaggatcccgcaatacctcttctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttacgaaattcctaggcaa
atggtgggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcaaatgatatgtactcactgataagtggatattaacccagaaac
ttagtatagcgagatataaggtacaatatgcaaaacatatgaaactgaag
aagaacgaagaccaaagtgtggaaactttgctccttcttagaattggaaa
caatcacccatggaaagagttacagagacaaagtttagagctgagacaaa
aagatggaccatctagagactgccatatccagggatccatcccataatta
gcctccaacgatgacaccatttgcatacactagcaagcctttgttgcaag
gaccgtgatatagctgtcccttgtgagaataggccggggcctagcaacac
agaagtggatgctcacagtcaactattggatgggatcacaggccctcaat
gggaggagctagaggaaagtaatccaggagctaaagagatctgcacccta
tcggtgaacacattatgacttatccagtaccccagagctctttgacctct
attctgccatatgtatccaaaagaatggccctagttcggccaatccactg
caggagagcctaatgggtctagggcactttaatggctcagttacggaacg
ctcaaggccaaaatgagcaatatggtgttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_56920637_56921471
seq2: B6Ng01-207P21.b_51_885

seq1  GAATTCTCGTGCTGAGGCTCGCTGAAAATAAATATCATCTGGGAGACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGTGCTGAGGCTCGCTGAAAATAAATATCATCTGGGAGACACA  50

seq1  CATAAGATTTATACAGCAATCCCCTTCTCTGGCTTGTTTTCCATAGTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGATTTATACAGCAATCCCCTTCTCTGGCTTGTTTTCCATAGTTTA  100

seq1  AGTTAACAATGGTCAACTATGGTCTAAAGATGCAAATATAAAATTCCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACAATGGTCAACTATGGTCTAAAGATGCAAATATAAAATTCCATA  150

seq1  AACAATACATATGACTTAATTTCATTATAATTGCTCTAATTTATTATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATACATATGACTTAATTTCATTATAATTGCTCTAATTTATTATTAG  200

seq1  TTATTGCCATTGATATCTTTCAAATTATGTTTAATAGAGAATTTCATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCCATTGATATCTTTCAAATTATGTTTAATAGAGAATTTCATACA  250

seq1  TGCATATAATGTGTTTTGACCAAATTATTCCTGAGACTTTCCCCTTCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATAATGTGTTTTGACCAAATTATTCCTGAGACTTTCCCCTTCCAA  300

seq1  CTCTCTCCTTTAAAAAAAAAAAAATCCCAGAGTTCGCATGCCTATATGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCTTTAAAAAAAAAAAAATCCCAGAGTTCGCATGCCTATATGCA  350

seq1  CATGGGTATAGGATCTCAAGGGTCACATCCCTAAAATAAATGGATCCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTATAGGATCTCAAGGGTCACATCCCTAAAATAAATGGATCCTCC  400

seq1  CTCCCCCACAAAGCCATCAATTGTCAATGGCTTCTCAGGTAGCCATGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCACAAAGCCATCAATTGTCAATGGCTTCTCAGGTAGCCATGGGA  450

seq1  GTTCATGAGGTCCTCCCACTTCCATGCAGGAATTTTGGCAGCTTGATCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGAGGTCCTCCCACTTCCATGCAGGAATTTTGGCAGCTTGATCGA  500

seq1  TCTGGCACCGGTCTTGTGCATTCAGTCACAGTCACTATGAGTTCATGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCACCGGTCTTGTGCATTCAGTCACAGTCACTATGAGTTCATGTGT  550

seq1  GCACTGGCCCTGTCATGTTCAACAAATACTGTTTCACTGAAAATGTCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGCCCTGTCATGTTCAACAAATACTGTTTCACTGAAAATGTCTAT  600

seq1  TCCCTGTGGCTCTCACAGTCTTCCCAGATCCTCTTCCATGGTGATCTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGGCTCTCACAGTCTTCCCAGATCCTCTTCCATGGTGATCTCTG  650

seq1  AGCCTTGGTAGAAGCAGGTGTGATATAAATGTCTTGGTTAGAGTTGAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGGTAGAAGCAGGTGTGATATAAATGTCTTGGTTAGAGTTGAACA  700

seq1  TTCCACTGACTTTTATTCGCTACACAATGGCCAGTTGGTTGTAGGTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTGACTTTTATTCGCTACACAATGGCCAGTTGGTTGTAGGTCTCT  750

seq1  GTATTAATCACAGTCTACTGAAGAAGAAAAAAATAAGCTTCTTTGATGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAATCACAGTCTACTGAAGAAGAAAAAAATAAGCTTCTTTGATGAA  800

seq1  GATTGATAAATGCACTAATTTTTTAGTATAAAGAT  835
      |||||||||||||||||||||||||||||||||||
seq2  GATTGATAAATGCACTAATTTTTTAGTATAAAGAT  835