BAC Information

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BAC

Clone NameB6Ng01-208B13
Chromosome14 (Build37)
Map Location 106,866,376 - 107,011,881
singlet/doubletdoublet
Overlap geneEG668743, LOC100043811, LOC621499, LOC100043814, EG668742
Upstream geneLOC620376, LOC100043469, Spry2, EG621364, LOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487
Downstream geneLOC668748, LOC668752
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208B13.bB6Ng01-208B13.g
ACCGA027069GA027070
length8931,161
definitionB6Ng01-208B13.b B6Ng01-208B13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,011,268 - 107,011,881)(106,866,376 - 106,867,475)
sequence
gaattcatctgatgctaaagcttctggaagacaggcgagaaggagtgagc
tgcgtctgtgtagtagtagacaagagttattttccaggccacacaaaggc
aagacaagattatgctgaacaggatttcccatggaaaaataacaacagaa
agacaaatgttatgctactaagtttttagaaggctttacaccataagcag
cagcttataaaaaaaaaaagtctgagtcatagattaatataggtgataat
aaattaaacttgacatagaggtgggttattatcttcccagagtatacagt
atttgaccttcctttttaaaaatgaatattggtggtaaaaagtgttaacc
aacccagagccgtttagaaagatgatgtagctaaaggaaaggcaagggct
gtggggcttgtccagagatcatcagaaccggtcccactagctagagtgca
gcattaagccaggctgagaccacaaaacagtcctatcagtggtgaaaaaa
tatacaacaacagcaataccacgagatgaggtggccaagtggcttgctaa
aaaacatttatgtttgatggaaggcaaataaggtttatgtctcttctagc
caactctttttactgaacaattaagagatgtaatgagatcttttgtactt
tatcacacactgctaatatttttgagtgtccaattagctattcagggctg
tgcttttcttgggagtgctgtcagtggaccttcagagaccctgatcacac
tgttacataatagtgaaacctctgagtgtggtatagatttgtaaagcagc
agacagcagtaacatcaatagatatagtcatgaatgagaaacagtgattt
aaaagggtataaaggttgtgggatgaatatgtgtgtgtgtgag
gaattccatcccaaagttatcaaaaaagatgggcacaggggtgggggtgg
gggtagaggggcacttcacacacatcaaaggtacaatcttccaagatgaa
ctctcaattctgaatatctatgctccaaatgcaagggcatccacattcat
taaagaaactatactgaagccgaaagcacacattgcacctcacacaataa
ttgtgttagacttcaacaccccactctcatcaatggacagatcatggaaa
caaaaactaaagagagacacagtgaaaataacacacgttatggaccaagt
ggatttaacagatatctacaaaacattttatcctaaatcaaaagaatata
cctttttctcatcacctcatggtaccttctccaaaactgaccagatcatt
gttcacaaaagtgacctcaacagatacaagaagattgaaataatcccaga
caccctatcagatcactatggatgaaggctggtcttcaatagccacaaaa
cccacagaaagcccacaatgttaataaagaaaatatccagttaaaaaaca
aacaaacaagcaaacaaacagtaaaaaccaaaacagcaacaaaggcatct
ccagcaggctggcatcaaggtgactaactatatcaggaagtcactaaaac
ccaaatgcatctgggcacacctgtgagtgattttcacttaattaaatcgt
tttgaagtgggaaggcccactttctagtgtggatctctgagacgggagca
cacaggttttaatccagattgaatttaattaggggaagccccactccata
atccagtgccacaccttcagctagaggcctatattaagtgaacagccaaa
agggaaagcctcagtcttttgcttggctttgcttagcaagtatcttcctt
ccgcctgggcttcacgtcagactttgaattgtgtatcccagcatattacc
tatagatcgccttagaacaatcagccctgtggaagtgatacgggtatagg
acttcctttgacctttcttgtactaagccatctactgctgatctgacctc
gaacccccagcccttgaaagagaaggaaggtctttcagtttcagtcttga
gattgaatgccgaaacccccattccaggctcttgcgccttcaaccagctg
gtacctcccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_107011268_107011881
seq2: B6Ng01-208B13.b_325_939 (reverse)

seq1  CACACACACACACATATTCATCCCACAACC-TTATACCCTTTTAAATCAC  49
      | |||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTCACACACACACATATTCATCCCACAACCTTTATACCCTTTTAAATCAC  50

seq1  TGTTTCTCATTCATGACTATATCTATTGATGTTACTGCTGTCTGCTGCTT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCATTCATGACTATATCTATTGATGTTACTGCTGTCTGCTGCTT  100

seq1  TACAAATCTATACCACACTCAGAGGTTTCACTATTATGTAACAGTGTGAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATCTATACCACACTCAGAGGTTTCACTATTATGTAACAGTGTGAT  150

seq1  CAGGGTCTCTGAAGGTCCACTGACAGCACTCCCAAGAAAAGCACAGCCCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCTCTGAAGGTCCACTGACAGCACTCCCAAGAAAAGCACAGCCCT  200

seq1  GAATAGCTAATTGGACACTCAAAAATATTAGCAGTGTGTGATAAAGTACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCTAATTGGACACTCAAAAATATTAGCAGTGTGTGATAAAGTACA  250

seq1  AAAGATCTCATTACATCTCTTAATTGTTCAGTAAAAAGAGTTGGCTAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCTCATTACATCTCTTAATTGTTCAGTAAAAAGAGTTGGCTAGAA  300

seq1  GAGACATAAACCTTATTTGCCTTCCATCAAACATAAATGTTTTTTAGCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATAAACCTTATTTGCCTTCCATCAAACATAAATGTTTTTTAGCAA  350

seq1  GCCACTTGGCCACCTCATCTCGTGGTATTGCTGTTGTTGTATATTTTTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTGGCCACCTCATCTCGTGGTATTGCTGTTGTTGTATATTTTTTC  400

seq1  ACCACTGATAGGACTGTTTTGTGGTCTCAGCCTGGCTTAATGCTGCACTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGATAGGACTGTTTTGTGGTCTCAGCCTGGCTTAATGCTGCACTC  450

seq1  TAGCTAGTGGGACCGGTTCTGATGATCTCTGGACAAGCCCCACAGCCCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAGTGGGACCGGTTCTGATGATCTCTGGACAAGCCCCACAGCCCTT  500

seq1  GCCTTTCCTTTAGCTACATCATCTTTCTAAACGGCTCTGGGTTGGTTAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCCTTTAGCTACATCATCTTTCTAAACGGCTCTGGGTTGGTTAAC  550

seq1  ACTTTTTACCACCAATATTCATTTTTAAAAAGGAAGGTCAAATACTGTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTACCACCAATATTCATTTTTAAAAAGGAAGGTCAAATACTGTAT  600

seq1  ACTCTGGGAAGATAA  614
      |||||||||||||||
seq2  ACTCTGGGAAGATAA  615

seq1: chr14_106866376_106867475
seq2: B6Ng01-208B13.g_90_1229

seq1  AAAAAAGATGGGCACAGGGGTGGGGGTGGGGGTAGAGGGGCACTTCACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGATGGGCACAGGGGTGGGGGTGGGGGTAGAGGGGCACTTCACAC  50

seq1  ACATCAAAGGTACAATCTTCCAAGATGAACTCTCAATTCTGAATATCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAAGGTACAATCTTCCAAGATGAACTCTCAATTCTGAATATCTAT  100

seq1  GCTCCAAATGCAAGGGCATCCACATTCATTAAAGAAACTATACTGAAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAAATGCAAGGGCATCCACATTCATTAAAGAAACTATACTGAAGCC  150

seq1  GAAAGCACACATTGCACCTCACACAATAATTGTGTTAGACTTCAACACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCACACATTGCACCTCACACAATAATTGTGTTAGACTTCAACACCC  200

seq1  CACTCTCATCAATGGACAGATCATGGAAACAAAAACTAAAGAGAGACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCATCAATGGACAGATCATGGAAACAAAAACTAAAGAGAGACACA  250

seq1  GTGAAAATAACACACGTTATGGACCAAGTGGATTTAACAGATATCTACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAATAACACACGTTATGGACCAAGTGGATTTAACAGATATCTACAA  300

seq1  AACATTTTATCCTAAATCAAAAGAATATACCTTTTTCTCATCACCTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTATCCTAAATCAAAAGAATATACCTTTTTCTCATCACCTCATG  350

seq1  GTACCTTCTCCAAAACTGACCAGATCATTGTTCACAAAAGTGACCTCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTTCTCCAAAACTGACCAGATCATTGTTCACAAAAGTGACCTCAAC  400

seq1  AGATACAAGAAGATTGAAATAATCCCAGACACCCTATCAGATCACTATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAAGAAGATTGAAATAATCCCAGACACCCTATCAGATCACTATGG  450

seq1  ATGAAGGCTGGTCTTCAATAGCCACAAAACCCACAGAAAGCCCACAATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGCTGGTCTTCAATAGCCACAAAACCCACAGAAAGCCCACAATGT  500

seq1  TAATAAAGAAAATATCCAGTTAAAAAACAAACAAACAAGCAAACAAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAGAAAATATCCAGTTAAAAAACAAACAAACAAGCAAACAAACAG  550

seq1  TAAAAACCAAAACAGCAACAAAGGCATCTCCAGCAGGCTGGCATCAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACCAAAACAGCAACAAAGGCATCTCCAGCAGGCTGGCATCAAGGT  600

seq1  GACTAACTATATCAGGAAGTCACTAAAACCCAAATGCATCTGGGCACACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAACTATATCAGGAAGTCACTAAAACCCAAATGCATCTGGGCACACC  650

seq1  TGTGAGTGATTTTCACTTAATTAAATCG-TTTGAAGTGGGAAGGCCCAC-  698
      |||||||||||||||||||||||||||| |||||||||||||||||||| 
seq2  TGTGAGTGATTTTCACTTAATTAAATCGTTTTGAAGTGGGAAGGCCCACT  700

seq1  TTCTAGTGTGGATCTCTGAGACGGGAGCACACAGG-TTTAATCCAGATTG  747
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTCTAGTGTGGATCTCTGAGACGGGAGCACACAGGTTTTAATCCAGATTG  750

seq1  AATTTAATTA-GGGAAGCCCCAC-CCATAATCCAG-GCCACACCTTCAGC  794
      |||||||||| |||||||||||| ||||||||||| ||||||||||||||
seq2  AATTTAATTAGGGGAAGCCCCACTCCATAATCCAGTGCCACACCTTCAGC  800

seq1  TAGAGGCCTATA-TAAG-GAACAGCAAAAAGGG-AAGCCTCAGTC-TTTG  840
      |||||||||||| |||| ||||||| ||||||| ||||||||||| ||||
seq2  TAGAGGCCTATATTAAGTGAACAGCCAAAAGGGAAAGCCTCAGTCTTTTG  850

seq1  C-TGGC-TTGC-TAGCAAGTATCTTCC-TCCGC--TGGCCTCACGTCAGA  884
      | |||| |||| ||||||||||||||| |||||   ||| ||||||||||
seq2  CTTGGCTTTGCTTAGCAAGTATCTTCCTTCCGCCTGGGCTTCACGTCAGA  900

seq1  CTT--GATTGTG-ATTCCAGCATAT--ACTATAGATCGCCTTAG-ACAAC  928
      |||   |||||| || |||||||||   |||||||||||||||| |||| 
seq2  CTTTGAATTGTGTATCCCAGCATATTACCTATAGATCGCCTTAGAACAAT  950

seq1  CAGCCCTGT-GAAGTGA-ACGGTTATAGGACT--CTTTGACGTT--CTGT  972
      ||||||||| ||||||| |||| |||||||||  ||||||| ||   |||
seq2  CAGCCCTGTGGAAGTGATACGGGTATAGGACTTCCTTTGACCTTTCTTGT  1000

seq1  TCACAAGCAACCACTGCTGA-CTGAGCCAGAA-CCCCAGCC--TGGAAGA  1018
       |  |  || | |||||||| |||| |  ||| ||||||||  || ||||
seq2  ACTAAGCCATCTACTGCTGATCTGACCTCGAACCCCCAGCCCTTGAAAGA  1050

seq1  GA--GAAAGCCTTTCAG-TTCAG-CCTGAGGATGGATGCAGAAACCCCCC  1064
      ||  ||| | ||||||| ||||| | ||||  || |||| ||||||||| 
seq2  GAAGGAAGGTCTTTCAGTTTCAGTCTTGAGATTGAATGCCGAAACCCCCA  1100

seq1  ATCCAGGCCCTTGCGC--TCAA-CAGCTGG-ACCTCCCTA  1100
       ||||||| |||||||  |||| ||||||| |||||||||
seq2  TTCCAGGCTCTTGCGCCTTCAACCAGCTGGTACCTCCCTA  1140