BAC Information

Click to search

BAC

Clone NameB6Ng01-208D14
Chromosome14 (Build37)
Map Location 106,818,510 - 106,819,636
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620376, LOC100043469, Spry2, EG621364, LOC212084, Trim52, LOC100043807, LOC100043476
Downstream geneLOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208D14.bB6Ng01-208D14.g
ACCGA027160GA027161
length8281,123
definitionB6Ng01-208D14.b B6Ng01-208D14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagatttttttcatgaatgggtgttggattttg
tcaaatgctttctcagtatctaacaagtgatcatgtagtttttgtctttg
agtttgtttgtatagtgaatcacaatgatggatttctatatattaaacca
tccttgcatccctagaatgaaacctacttggtcaggatggatgattgttt
tgatgtgttcttaaattcagttagcgagaattttattgagtatttttgca
tcgatattcataagggaaattggtcttaagttctctatctttattgggtt
tttctgtagtttaggtaccagagtaattgtggcttcatagaatgaattgg
gtagagtaccttctgtttctattttgtggaatagtttgagaagaactgga
attagattttcttgaaggtctgatagatctctgcactaaaatctggtcct
ggcctttcttttttttttttttttttttttttttttggttgggagacttc
taatgactgcttctatttctttaggggatataggaacgtgtaggtcatta
ctctgatcctgatttaacttggtacctggtatctgtctaagaagttgttc
atttcatccaggttttccagttttgttgagtatagccttttgtagaagga
actgatagtgttttaaatttcttcaggatctgttgttatgtctcagtttt
catttctgattttgttaattaggatgctgtccctgggccctctagtgagt
ctggccaagtgtttatctatcattttattttctcaaagagccagttcctc
atttgattgattttttgaatagttcttc
gaattcagtgtcattcttctagaggtagataccagatttaagcatttttt
gttaaggggagttttactcaatatatgttttgggcataattgtcatagga
aaaaaatcaggtggctacagcttgtgtggtttacttctgggtcttctatt
ccatccacctggcatatatcagatatatatatatatatatgcttttgtgt
taatatcaagctatctccctagattcataaatttgttttttaatgatgcc
ccatatatcttgcatgatatgtttgtactgtcttatttcatatttattgt
ctgaatgttctcattcatttaccttgtcttcaagatctgatattctatct
tccattttgattccatcttctacttgatccattttattgacgaagctgtg
tacttactttttatgtgacttaatagttgttacttctataattttaatga
tgcatattttcaatatttctctctcatattcttccttcatatacctgatt
gcagggaactgagataatatgaatgaaataagaatttcaggtttaagaat
ctgcagcaatttgtatatgtctgtaaacacagaattaggggaagggtcca
tggaatagaagaatagaatcctttagacacaatagggtcaatctctatgt
tcaggctgagagagcaatgcaaattgaggatgcaatcacaactgatggag
attagatataaatatagatatagatatttagatatagatataccatttat
accccagacaaatcattatttaaaatccagtaacactgtaaggggtgaat
ggaataaaatcaaaatattgtgcagaaagatatgaatcactgggaaggga
atggagggtcatgaagcaaaccagagaacaggaaagtaaagagagacgaa
aacttgggactctggggtaggtggagagccaagattattaaagctatagg
aacagtgagaaagtaaaacatgaatgtaggcatacattttttgcaacttt
tagtaagggttcaatttctcctatagcccatcagccagcagaggtagtga
gaggaaagttattaggatatgaggcagtgcacctgttcagtaatatttct
ttggggggtgagttcaatctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_106818510_106819636
seq2: B6Ng01-208D14.g_64_1186 (reverse)

seq1  AAAAGATTGAACTCA-CCCCCAAAGAAATAATTACTGAACAGGTGCACTT  49
      ||||||||||||||| ||||||||||||| |||||||||||||||||| |
seq2  AAAAGATTGAACTCACCCCCCAAAGAAAT-ATTACTGAACAGGTGCAC-T  48

seq1  CCCTCATATCCTAATAACTTTCCTCTTCCACTACCTCTGCTGGCTGATGG  99
       |||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  GCCTCATATCCTAATAACTTTCCTCT--CACTACCTCTGCTGGCTGATGG  96

seq1  GCTATAGGAGAAATTGAACCCTTACTAAAAGTTGCAAAAAAATGTATGCC  149
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCTATAGGAGAAATTGAACCCTTACTAAAAGTTGC-AAAAAATGTATGCC  145

seq1  TACATTCATGTTTTACTTTCTCACTGTTCCTATAGCTTTAATAATCTTGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCATGTTTTACTTTCTCACTGTTCCTATAGCTTTAATAATCTTGG  195

seq1  CTCTCCACCTACCCCAGAGTCCCAAGTTTTCGTCTCTCTTTACTTTCCTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCACCTACCCCAGAGTCCCAAGTTTTCGTCTCTCTTTACTTTCCTG  245

seq1  TTCTCTGGTTTTGCTTCATGACCCTCCATT-CCTTCCCAGTGATTCATAT  298
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  TTCTCTGG-TTTGCTTCATGACCCTCCATTCCCTTCCCAGTGATTCATAT  294

seq1  CTTTCTGCACAATATTTTGATTTTATTCCATTCACCCCTTACAGTGTTAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCACAATATTTTGATTTTATTCCATTCACCCCTTACAGTGTTAC  344

seq1  TGGATTTTAAATAATGATTTGTCTGGGGTATAAATGGTATATCTATATCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTTAAATAATGATTTGTCTGGGGTATAAATGGTATATCTATATCT  394

seq1  AAATATCTATATCTATATTTATATCTAATCTCCATCAGTTGTGATTGCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTATATCTATATTTATATCTAATCTCCATCAGTTGTGATTGCAT  444

seq1  CCTCAATTTGCATTGCTCTCTCAGCCTGAACATAGAGATTGACCCTATTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATTTGCATTGCTCTCTCAGCCTGAACATAGAGATTGACCCTATTG  494

seq1  TGTCTAAAGGATTCTATTCTTCTATTCCATGGACCCTTCCCCTAATTCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAAAGGATTCTATTCTTCTATTCCATGGACCCTTCCCCTAATTCTG  544

seq1  TGTTTACAGACATATACAAATTGCTGCAGATTCTTAAACCTGAAATTCTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAGACATATACAAATTGCTGCAGATTCTTAAACCTGAAATTCTT  594

seq1  ATTTCATTCATATTATCTCAGTTCCCTGCAATCAGGTATATGAAGGAAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTCATATTATCTCAGTTCCCTGCAATCAGGTATATGAAGGAAGA  644

seq1  ATATGAGAGAGAAATATTGAAAATATGCATCATTAAAATTATAGAAGTAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGAGAGAAATATTGAAAATATGCATCATTAAAATTATAGAAGTAA  694

seq1  CAACTATTAAGTCACATAAAAAGTAAGTACACAGCTTCGTCAATAAAATG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATTAAGTCACATAAAAAGTAAGTACACAGCTTCGTCAATAAAATG  744

seq1  GATCAAGTAGAAGATGGAATCAAAATGGAAGATAGAATATCAGATCTTGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGTAGAAGATGGAATCAAAATGGAAGATAGAATATCAGATCTTGA  794

seq1  AGACAAGGTAAATGAATGAGAACATTCAGACAATAAATATGAAATAAGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGGTAAATGAATGAGAACATTCAGACAATAAATATGAAATAAGAC  844

seq1  AGTACAAACATATCATGCAAGATATATGGGGCATCATTAAAAAACAAATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAACATATCATGCAAGATATATGGGGCATCATTAAAAAACAAATT  894

seq1  TATGAATCTAGGGAGATAGCTTGATATTAACACAAAAGCATATATATATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATCTAGGGAGATAGCTTGATATTAACACAAAAGCATATATATATA  944

seq1  TATATATCTGATATATGCCAGGTGGATGGAATAGAAGACCCAGAAGTAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATCTGATATATGCCAGGTGGATGGAATAGAAGACCCAGAAGTAAA  994

seq1  CCACACAAGCTGTAGCCACCTGATTTTTTTCCTATGACAATTATGCCCAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAAGCTGTAGCCACCTGATTTTTTTCCTATGACAATTATGCCCAA  1044

seq1  AACATATATTGAGTAAAACTCCCCTTAACAAAAAATGCTTAAATCTGGTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATATTGAGTAAAACTCCCCTTAACAAAAAATGCTTAAATCTGGTA  1094

seq1  TCTACCTCTAGAAGAATGACACTGAATTC  1127
      |||||||||||||||||||||||||||||
seq2  TCTACCTCTAGAAGAATGACACTGAATTC  1123