BAC Information

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BAC

Clone NameB6Ng01-208G15
Chromosome14 (Build37)
Map Location 77,032,851 - 77,215,972
singlet/doubletdoublet
Overlap genenone
Upstream gene4930564B18Rik, Cog3, Slc25a30, LOC100043189, Tpt1, LOC100038852, Gtf2f2, LOC668504, Kctd4, 1200011I18Rik, Nufip1, LOC100043752, 2900040C04Rik, Tsc22d1, 2810032E02Rik
Downstream geneLOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678, Gm1587
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208G15.bB6Ng01-208G15.g
ACCGA027302GA027303
length1,1951,069
definitionB6Ng01-208G15.b B6Ng01-208G15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,214,767 - 77,215,972)(77,032,851 - 77,033,921)
sequence
gaattccaagctcaggaagtacacgctgaagacacgcagtaggctttagc
gtgccctccggagaggtgaggctgatacctcagcacagcagggtggaact
cggtctctcgcttccacccattatatctgaagagattattaagccatgag
caacaaactaattgtggctggcagcaaacgcgaaggtctctccttacaga
cggtgcagtgttcagtttccctaaaacgatcctggtggctctgttgctcc
ccactctccctgactcagaactgtcctgttctgtccggaacagctctatg
gttggggttgatatcaattgcacagctgcgtgttctcttggcaagtgaat
ccaggatgcccaaccacgtctgcctgcttccacaccagcctcctggccag
ggacagctataaaagtattctatctctaaacacggcaacaatatctattg
cgatataaagtctttcccaacgctatgacctaagaaatagatcatgctct
tttgtggagttttaaaacgcaacaggcatttcctacctttggaaaatacc
atgcttttagggttttccaggtgcttcttgtgcactcttccaaatatccc
taagtctacttattattattgtgcccactttacagattacaggagaaaaa
ctaaacataccagagtggctcgtttttaagtgttcagagtatcaaatgct
tcgtagcaattagctaatagatctgagctaaactgggactcaattcgggt
aactaactttaaccttaacagcttcctgctaagccagtgtgctcaactgc
tctatgctacttgccagcagttttgaattctgaattgtatttgttacact
tctaaccatgcctgggttttgtttgtttgttgtagggtttttcttgtttc
tcaaaatataattaacactgattaattagaatatagttttctatttcttc
aattcccattatacacattccccactcagcacacatacacacacacacac
acacaccacacacacacacacacgggatatctgtgtcattttgccttttc
cattcaaaagaatcaaattgttctcctcaatacagtgacttatagaagtc
ttcccacgggctcagacctcatttaatcataaaagtttttgaaaccaggg
aactatgtgaaacagtcgtgaataaacagcatattggggggatgt
gaattcaacggggacagatctggatttgaatggaacaccagaacagcgtg
gagggcgatagaatctgtgtgttcaatcctcatgacatccctttctgttg
ttgagaacagtcaatcatgttgaaatatgatacgtaagtgattacttccc
atggtgggggttaggtcctgttaggtgctttgttaatggagagaattctg
aatgaacttcagacatgtaaatggttttgttttgtgtctgctgcatgagc
tctgaggatctgggtcactgagctcttgagtacctctgtgcttgcctgcc
aagtgctgctcggtctgcctgacgtttgtattatttatcaacagtatgtt
tattattagttgctttctgtagaccagaggagggaatacgagattggtga
actagctgactcaggaaggagagcttgtgggactgggagctgcggttagc
gcaggctcacttgatactttcctaacctagcagttcagttccctctccat
tgcttgttctgtgttgcttcctcctcactctaacttgacctcttctagaa
cgttgtccctctgtgtgtcagagacactccaggaggctagatagagcata
taggaacgcaaagcccttcttgacaaggatgctctggttgtagcgttctt
tctgtctgtctcaaaggcgtggagcaaatctcaagtgaaaagacagaatc
aaaacagaaaaggtgtcaaagttgtatcctgggctaatattcgaacaaga
attgtgacagcctccaggaccatgtagagaggcagggagggaacggttct
ctgtgtggtgtggtgtggtgtttggctgggctggctgagtgaggagaggc
ctggagttagtaaccagcgcagtctgggaaggagcacaagactcagtgct
tagaagaatacagagagactcacagggaaaattggcacgctggaaccatc
tctttgagggtgaattgaggaattaagagcgagtccattttggttgaacg
acctctctacttttcaagttctctattcatttgcaaagtttaggtgctgg
atagaaatgcttatgaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_77214767_77215972
seq2: B6Ng01-208G15.b_43_1237 (reverse)

seq1  ACATCCCCCCAA-ATGCTGTGTTTATCAGGGACATTGTTCTTCATTAAGT  49
      |||||||||||| ||||||| ||  ||| |   | |||  ||||   |||
seq2  ACATCCCCCCAATATGCTGT-TTATTCACG---ACTGT--TTCACATAGT  44

seq1  CCCCCTGGTTTCCAAAAACTCTTATGAATAAATTGAGTCTGGAGCCCCGT  99
        ||||||||| |||||||| |||||| |||||   |||| ||||||   
seq2  -TCCCTGGTTT-CAAAAACTTTTATGATTAAATGAGGTCT-GAGCCCGTG  91

seq1  GGAAGAC-TCTATAAGGTCACTGTA-TGA-GAGAACAATTTGA-TCTTTT  145
      ||||||| ||||||| ||||||||| ||| ||||||||||||| ||||||
seq2  GGAAGACTTCTATAA-GTCACTGTATTGAGGAGAACAATTTGATTCTTTT  140

seq1  GAAATGGAAAAGGCAAAATGCACCAGAATATCCTGTGTGTGTGTGTGTGT  195
      | ||||||||||||||||||   ||| |||||| ||||||||||||||||
seq2  G-AATGGAAAAGGCAAAATGACACAG-ATATCCCGTGTGTGTGTGTGTGT  188

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGAGGTTGGGGAATGTGTAT  245
      | |||||||||||||||||||| |||||||||||  ||||||||||||||
seq2  G-GTGTGTGTGTGTGTGTGTGTATGTGTGCTGAG--TGGGGAATGTGTAT  235

seq1  AATGGGAATTGAAAGAAATAGAAAACTATATTCTAATTAATCAGTGTTAA  295
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAATTG-AAGAAATAGAAAACTATATTCTAATTAATCAGTGTTAA  284

seq1  TTATATTTTGAGAAACAAGAAAAACCCTACAACAAACAAACAAAACCCAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTGAGAAACAAGAAAAACCCTACAACAAACAAACAAAACCCAG  334

seq1  GCATGGTTAGAAGTGTAACAAATACAATTCAGAATTCAAAACTGCTGGCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTTAGAAGTGTAACAAATACAATTCAGAATTCAAAACTGCTGGCA  384

seq1  AGTAGCATAGAGCAGTTGAGCACACTGGCTTAGCAGGAAGCTGTTAAGGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCATAGAGCAGTTGAGCACACTGGCTTAGCAGGAAGCTGTTAAGGT  434

seq1  TAAAGTTAGTTACCCGAATTGAGTCCCAGTTTAGCTCAGATCTATTAGCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTAGTTACCCGAATTGAGTCCCAGTTTAGCTCAGATCTATTAGCT  484

seq1  AATTGCTACGAAGCATTTGATACTCTGAACACTTAAAAACGAGCCACTCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTACGAAGCATTTGATACTCTGAACACTTAAAAACGAGCCACTCT  534

seq1  GGTATGTTTAGTTTTTCTCCTGTAATCTGTAAAGTGGGCACAATAATAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTTTAGTTTTTCTCCTGTAATCTGTAAAGTGGGCACAATAATAAT  584

seq1  AAGTAGACTTAGGGATATTTGGAAGAGTGCACAAGAAGCACCTGGAAAAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGACTTAGGGATATTTGGAAGAGTGCACAAGAAGCACCTGGAAAAC  634

seq1  CCTAAAAGCATGGTATTTTCCAAAGGTAGGAAATGCCTGTTGCGTTTTAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAAGCATGGTATTTTCCAAAGGTAGGAAATGCCTGTTGCGTTTTAA  684

seq1  AACTCCACAAAAGAGCATGATCTATTTCTTAGGTCATAGCGTTGGGAAAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCACAAAAGAGCATGATCTATTTCTTAGGTCATAGCGTTGGGAAAG  734

seq1  ACTTTATATCGCAATAGATATTGTTGCCGTGTTTAGAGATAGAATACTTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATATCGCAATAGATATTGTTGCCGTGTTTAGAGATAGAATACTTT  784

seq1  TATAGCTGTCCCTGGCCAGGAGGCTGGTGTGGAAGCAGGCAGACGTGGTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTGTCCCTGGCCAGGAGGCTGGTGTGGAAGCAGGCAGACGTGGTT  834

seq1  GGGCATCCTGGATTCACTTGCCAAGAGAACACGCAGCTGTGCAATTGATA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCCTGGATTCACTTGCCAAGAGAACACGCAGCTGTGCAATTGATA  884

seq1  TCAACCCCAACCATAGAGCTGTTCCGGACAGAACAGGACAGTTCTGAGTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCCAACCATAGAGCTGTTCCGGACAGAACAGGACAGTTCTGAGTC  934

seq1  AGGGAGAGTGGGGAGCAACAGAGCCACCAGGATCGTTTTAGGGAAACTGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGTGGGGAGCAACAGAGCCACCAGGATCGTTTTAGGGAAACTGA  984

seq1  ACACTGCACCGTCTGTAAGGAGAGACCTTCGCGTTTGCTGCCAGCCACAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCACCGTCTGTAAGGAGAGACCTTCGCGTTTGCTGCCAGCCACAA  1034

seq1  TTAGTTTGTTGCTCATGGCTTAATAATCTCTTCAGATATAATGGGTGGAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTGTTGCTCATGGCTTAATAATCTCTTCAGATATAATGGGTGGAA  1084

seq1  GCGAGAGACCGAGTTCCACCCTGCTGTGCTGAGGTATCAGCCTCACCTCT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGAGACCGAGTTCCACCCTGCTGTGCTGAGGTATCAGCCTCACCTCT  1134

seq1  CCGGAGGGCACGCTAAAGCCTACTGCGTGTCTTCAGCGTGTACTTCCTGA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGGGCACGCTAAAGCCTACTGCGTGTCTTCAGCGTGTACTTCCTGA  1184

seq1  GCTTGGAATTC  1206
      |||||||||||
seq2  GCTTGGAATTC  1195

seq1: chr14_77032851_77033921
seq2: B6Ng01-208G15.g_63_1131

seq1  GAATTCAACGGGGACAGATCTGGATTTGAATGGAACACCAGAACAGCGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACGGGGACAGATCTGGATTTGAATGGAACACCAGAACAGCGTG  50

seq1  GAGGGCGATAGAATCTGTGTGTTCAATCCTCATGACATCCCTTTCTGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCGATAGAATCTGTGTGTTCAATCCTCATGACATCCCTTTCTGTTG  100

seq1  TTGAGAACAGTCAATCATGTTGAAATATGATACGTAAGTGATTACTTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAACAGTCAATCATGTTGAAATATGATACGTAAGTGATTACTTCCC  150

seq1  ATGGTGGGGGTTAGGTCCTGTTAGGTGCTTTGTTAATGGAGAGAATTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGGGGTTAGGTCCTGTTAGGTGCTTTGTTAATGGAGAGAATTCTG  200

seq1  AATGAACTTCAGACATGTAAATGGTTTTGTTTTGTGTCTGCTGCATGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACTTCAGACATGTAAATGGTTTTGTTTTGTGTCTGCTGCATGAGC  250

seq1  TCTGAGGATCTGGGTCACTGAGCTCTTGAGTACCTCTGTGCTTGCCTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGATCTGGGTCACTGAGCTCTTGAGTACCTCTGTGCTTGCCTGCC  300

seq1  AAGTGCTGCTCGGTCTGCCTGACGTTTGTATTATTTATCAACAGTATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTGCTCGGTCTGCCTGACGTTTGTATTATTTATCAACAGTATGTT  350

seq1  TATTATTAGTTGCTTTCTGTAGACCAGAGGAGGGAATACGAGATTGGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTAGTTGCTTTCTGTAGACCAGAGGAGGGAATACGAGATTGGTGA  400

seq1  ACTAGCTGACTCAGGAAGGAGAGCTTGTGGGACTGGGAGCTGCGGTTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCTGACTCAGGAAGGAGAGCTTGTGGGACTGGGAGCTGCGGTTAGC  450

seq1  GCAGGCTCACTTGATACTTTCCTAACCTAGCAGTTCAGTTCCCTCTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTCACTTGATACTTTCCTAACCTAGCAGTTCAGTTCCCTCTCCAT  500

seq1  TGCTTGTTCTGTGTTGCTTCCTCCTCACTCTAACTTGACCTCTTCTAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTTCTGTGTTGCTTCCTCCTCACTCTAACTTGACCTCTTCTAGAA  550

seq1  CGTTGTCCCTCTGTGTGTCAGAGACACTCCAGGAGGCTAGATAGAGCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTCCCTCTGTGTGTCAGAGACACTCCAGGAGGCTAGATAGAGCATA  600

seq1  TAGGAACGCAAAGCCCTTCTTGACAAGGATGCTCTGGTTGTAGCGTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAACGCAAAGCCCTTCTTGACAAGGATGCTCTGGTTGTAGCGTTCTT  650

seq1  TCTGTCTGTCTCAAAGGCGTGGAGCAAATCTCAAGTGAAAAGACAGAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTCTCAAAGGCGTGGAGCAAATCTCAAGTGAAAAGACAGAATC  700

seq1  AAAACAGAAAAGGTGTCAAAGTTGTATCCTGGGCTAATATTCGAACAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAAAAGGTGTCAAAGTTGTATCCTGGGCTAATATTCGAACAAGA  750

seq1  ATTGTGACAGCCTCCAGGACCATGTAGAGAGGCAGGGAGGGAACGGTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGACAGCCTCCAGGACCATGTAGAGAGGCAGGGAGGGAACGGTTCT  800

seq1  CTGTGTGGTGTGGTGTGGTGTTTGGCTGGGCTGGCTGAGTGAGGAGAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGGTGTGGTGTGGTGTTTGGCTGGGCTGGCTGAGTGAGGAGAGGC  850

seq1  CTGGAGTTAGTAACCAGCGCAGTCTGGGAAGGAGCACAAGACTCAGTGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTTAGTAACCAGCGCAGTCTGGGAAGGAGCACAAGACTCAGTGCT  900

seq1  TAGGAAGAATACAGAGAGACCCACAGGGAAAA-TGGCAGGCTGGAACCAT  949
      || ||||||||||||||||| ||||||||||| ||||| |||||||||||
seq2  TA-GAAGAATACAGAGAGACTCACAGGGAAAATTGGCACGCTGGAACCAT  949

seq1  CGCTTTGAGGGTGAATAGAGGAATTCAGAAGCGAGTCCATTTTGTTAGAA  999
      | |||||||||||||| |||||||| || ||||||||||||||| | | |
seq2  CTCTTTGAGGGTGAATTGAGGAATTAAG-AGCGAGTCCATTTTGGTTG-A  997

seq1  ACGA-CTC-CTACTTTTCAAGTTCTCCTTATTCATTTGTCATAGTTTAAG  1047
      |||| ||| |||||||||||||||||  |||||||||| || ||||| ||
seq2  ACGACCTCTCTACTTTTCAAGTTCTC--TATTCATTTG-CAAAGTTT-AG  1043

seq1  GTGCTGGA-AGAAA-GCATATGAGGT  1071
      |||||||| ||||| || ||||||||
seq2  GTGCTGGATAGAAATGCTTATGAGGT  1069