BAC Information

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BAC

Clone NameB6Ng01-208I07
Chromosome14 (Build37)
Map Location 8,945,020 - 8,999,610
singlet/doubletdoublet
Overlap genePxk, Pdhb
Upstream geneEG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14
Downstream geneKctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik, LOC100041948
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208I07.bB6Ng01-208I07.g
ACCGA027379GA027380
length1,111608
definitionB6Ng01-208I07.b B6Ng01-208I07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,998,491 - 8,999,610)(8,945,020 - 8,945,627)
sequence
gaattctataggtgagcaaagcttcctgtgatggggtgacaggctttaat
tgtaaattccccctttacttttgtttgagataagatctcactgtgttgcc
aacacagtgtcatcctgccttagcctcctaagtggtgagcttacaggtgt
gtggcactgtactgcttttccttagtcgatacagtcgtgtacctgtttct
ccgattccacaaagcctgtttccttgccttgtcttcatttaggtaataaa
tctgcgcaccatcagaccaatggacatcgaagccatagaagccagtgtga
tgaagacaaatcatctcgtgactgtggaaggaggctggccacaatttgga
gtaggagctgagatttgtgccagaattatggaaggtatttcaaagaacct
ggttttagaacacaatcaagctgtacttgaatgccgacttgtaagagatc
aaaagctaggggtgaccaagtgaattttcaacttgtcagtctagggtttt
gtcttttgggtaaatgtttttaaaagtcaagccaaaagtagagtcctgta
actacgattcattctcttcttgagtcccgagtctgcctctcaggtgagcc
atctctcttccttaggccctgcattcaacttccttgatgcccctgccgtg
cgtgtcactggtgctgatgtccctatgccttacgcaaaggtcctagaaga
caactccgtacctcaggtcaaagacatcatatttgcagtaaagaagactc
tgaacatctgattcggactttgaatgtaaagtcattgaaatctatttaaa
atccttgttgggacttcacctgatgtgtactgcgagactgctagtcataa
agttaatgctgaagtgacagcaggtgtctgaactgtaagaagtttcaatg
tgcttatgagtggaatgttgtccactccctaccctagatactctgctttg
tctgttactgtttaagttaaatttgccctctttcactggaaggggcagat
aagaatgccccacagaaggtaacttatatgtctagaagtatattatctac
attgctgtttattgttttgatagataaagggatttcccaccatgaagtct
tgaagtactat
gaattccaaaacagcccaggctgttacccagaaaaaccctttcttgaaag
actaacccagccaaccaaccaaaaaaacccaccagtgggtgatgacagga
tggtcccttatcaaatgaaaagagggatcaactctatttgttattgataa
tcagatgtggcatctcagtcctttcctctcagaagtcttgcttaaagctg
tgcagtttaaatgataagtgtagcctccaatgtgttgtgttttctctcag
tgctgggattgaacaaagtgcctccagctctctagcctccagctgggcaa
gtattctactgctgtgcaatgaatgccccagcctacaaaccaacttactt
ctttattttttgttttgttttgtttttcgagacagggtttctctgtgtag
ccctggctgtcctcgaactcagaaatccgccaacttacttcttaaaaact
ggttttggggccaatgagatcgctcaacaggtaaatgtgcttacaacctg
acttacaacctgaacaaaatccctgaggtccacatggccagggaaagcca
actccaactctacagggtcatattctctctctctctctctctctctctct
ctctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8998491_8999610
seq2: B6Ng01-208I07.b_50_1160 (reverse)

seq1  ATAGTACTCCAAGACTTCATTGGTGGGAATCCCCTTTATTCCTTATCAAA  50
      |||||||| |||||||||| |||||||||  ||||||||    |||||||
seq2  ATAGTACTTCAAGACTTCA-TGGTGGGAAATCCCTTTAT---CTATCAAA  46

seq1  ACAATTAAACAGCAAATGTAGATAATATACTTCTTAGACATATAAGTTAC  100
      |||| |||||||| ||||||||||||||||||| ||||||||||||||||
seq2  ACAA-TAAACAGC-AATGTAGATAATATACTTC-TAGACATATAAGTTAC  93

seq1  CTTCTGTGGGGGCATTCTTATCTTGCCCCTTCCAGTGAAAGAGGGCAAAT  150
      ||||||| |||||||||||||| |||||||||||||||||||||||||||
seq2  CTTCTGT-GGGGCATTCTTATC-TGCCCCTTCCAGTGAAAGAGGGCAAAT  141

seq1  TTAACTTAAACAGTAACAGACAAAGCAGAGTATCTAGGGTAGGGAGTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTAAACAGTAACAGACAAAGCAGAGTATCTAGGGTAGGGAGTGGA  191

seq1  CAACATTCCACTCATAAGCACATTGAAACTTCTTACAGTTCAGACACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTCCACTCATAAGCACATTGAAACTTCTTACAGTTCAGACACCTG  241

seq1  CTGTCACTTCAGCATTAACTTTATGACTAGCAGTCTCGCAGTACACATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACTTCAGCATTAACTTTATGACTAGCAGTCTCGCAGTACACATCA  291

seq1  GGTGAAGTCCCAACAAGGATTTTAAATAGATTTCAATGACTTTACATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGTCCCAACAAGGATTTTAAATAGATTTCAATGACTTTACATTCA  341

seq1  AAGTCCGAATCAGATGTTCAGAGTCTTCTTTACTGCAAATATGATGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCGAATCAGATGTTCAGAGTCTTCTTTACTGCAAATATGATGTCTT  391

seq1  TGACCTGAGGTACGGAGTTGTCTTCTAGGACCTTTGCGTAAGGCATAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGAGGTACGGAGTTGTCTTCTAGGACCTTTGCGTAAGGCATAGGG  441

seq1  ACATCAGCACCAGTGACACGCACGGCAGGGGCATCAAGGAAGTTGAATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGCACCAGTGACACGCACGGCAGGGGCATCAAGGAAGTTGAATGC  491

seq1  AGGGCCTAAGGAAGAGAGATGGCTCACCTGAGAGGCAGACTCGGGACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCTAAGGAAGAGAGATGGCTCACCTGAGAGGCAGACTCGGGACTCA  541

seq1  AGAAGAGAATGAATCGTAGTTACAGGACTCTACTTTTGGCTTGACTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAATGAATCGTAGTTACAGGACTCTACTTTTGGCTTGACTTTTA  591

seq1  AAAACATTTACCCAAAAGACAAAACCCTAGACTGACAAGTTGAAAATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTTACCCAAAAGACAAAACCCTAGACTGACAAGTTGAAAATTCA  641

seq1  CTTGGTCACCCCTAGCTTTTGATCTCTTACAAGTCGGCATTCAAGTACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCACCCCTAGCTTTTGATCTCTTACAAGTCGGCATTCAAGTACAG  691

seq1  CTTGATTGTGTTCTAAAACCAGGTTCTTTGAAATACCTTCCATAATTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTGTGTTCTAAAACCAGGTTCTTTGAAATACCTTCCATAATTCTG  741

seq1  GCACAAATCTCAGCTCCTACTCCAAATTGTGGCCAGCCTCCTTCCACAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAATCTCAGCTCCTACTCCAAATTGTGGCCAGCCTCCTTCCACAGT  791

seq1  CACGAGATGATTTGTCTTCATCACACTGGCTTCTATGGCTTCGATGTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAGATGATTTGTCTTCATCACACTGGCTTCTATGGCTTCGATGTCCA  841

seq1  TTGGTCTGATGGTGCGCAGATTTATTACCTAAATGAAGACAAGGCAAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTGATGGTGCGCAGATTTATTACCTAAATGAAGACAAGGCAAGGA  891

seq1  AACAGGCTTTGTGGAATCGGAGAAACAGGTACACGACTGTATCGACTAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCTTTGTGGAATCGGAGAAACAGGTACACGACTGTATCGACTAAG  941

seq1  GAAAAGCAGTACAGTGCCACACACCTGTAAGCTCACCACTTAGGAGGCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCAGTACAGTGCCACACACCTGTAAGCTCACCACTTAGGAGGCTA  991

seq1  AGGCAGGATGACACTGTGTTGGCAACACAGTGAGATCTTATCTCAAACAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGATGACACTGTGTTGGCAACACAGTGAGATCTTATCTCAAACAA  1041

seq1  AAGTAAAGGGGGAATTTACAATTAAAGCCTGTCACCCCATCACAGGAAGC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAGGGGGAATTTACAATTAAAGCCTGTCACCCCATCACAGGAAGC  1091

seq1  TTTGCTCACCTATAGAATTC  1120
      ||||||||||||||||||||
seq2  TTTGCTCACCTATAGAATTC  1111

seq1: chr14_8945020_8945627
seq2: B6Ng01-208I07.g_63_670

seq1  GAATTCCAAAACAGCCCAGGCTGTTACCCAGAAAAACCCTTTCTTGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAACAGCCCAGGCTGTTACCCAGAAAAACCCTTTCTTGAAAG  50

seq1  ACTAACCCAGCCAACCAACCAAAAAAACCCACCAGTGGGTGATGACAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACCCAGCCAACCAACCAAAAAAACCCACCAGTGGGTGATGACAGGA  100

seq1  TGGTCCCTTATCAAATGAAAAGAGGGATCAACTCTATTTGTTATTGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCCTTATCAAATGAAAAGAGGGATCAACTCTATTTGTTATTGATAA  150

seq1  TCAGATGTGGCATCTCAGTCCTTTCCTCTCAGAAGTCTTGCTTAAAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGTGGCATCTCAGTCCTTTCCTCTCAGAAGTCTTGCTTAAAGCTG  200

seq1  TGCAGTTTAAATGATAAGTGTAGCCTCCAATGTGTTGTGTTTTCTCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTTAAATGATAAGTGTAGCCTCCAATGTGTTGTGTTTTCTCTCAG  250

seq1  TGCTGGGATTGAACAAAGTGCCTCCAGCTCTCTAGCCTCCAGCTGGGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATTGAACAAAGTGCCTCCAGCTCTCTAGCCTCCAGCTGGGCAA  300

seq1  GTATTCTACTGCTGTGCAATGAATGCCCCAGCCTACAAACCAACTTACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTACTGCTGTGCAATGAATGCCCCAGCCTACAAACCAACTTACTT  350

seq1  CTTTATTTTTTGTTTTGTTTTGTTTTTCGAGACAGGGTTTCTCTGTGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTTTTGTTTTGTTTTGTTTTTCGAGACAGGGTTTCTCTGTGTAG  400

seq1  CCCTGGCTGTCCTCGAACTCAGAAATCCGCCAACTTACTTCTTAAAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCTGTCCTCGAACTCAGAAATCCGCCAACTTACTTCTTAAAAACT  450

seq1  GGTTTTGGGGCCAATGAGATCGCTCAACAGGTAAATGTGCTTACAACCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGGGGCCAATGAGATCGCTCAACAGGTAAATGTGCTTACAACCTG  500

seq1  ACTTACAACCTGAACAAAATCCCTGAGGTCCACATGGTCAGGGAAAGCCA  550
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACTTACAACCTGAACAAAATCCCTGAGGTCCACATGGCCAGGGAAAGCCA  550

seq1  ACTCCAACTCTACAGGGTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAACTCTACAGGGTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCT  600

seq1  CTCTCTCT  608
      ||||||||
seq2  CTCTCTCT  608