BAC Information

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BAC

Clone NameB6Ng01-208N03
Chromosome14 (Build37)
Map Location 74,786,718 - 74,787,844
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578, LOC629583
Downstream geneHtr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519, LOC100043169, 5031414D18Rik, 4921509B22Rik, LOC100043176, Lcp1, Cpb2, Zc3h13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208N03.bB6Ng01-208N03.g
ACCGA027597GA027598
length7701,118
definitionB6Ng01-208N03.b B6Ng01-208N03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcataaaagtgaaaagctgccgcgtagcaaaaaaaagcaatccagc
caaaggagatcctagagaatggaagaaaaaccctgctaactatacatcag
acaaaagattaatatctagagtgcataaaattttagaagactacataccc
agaaaccaaataatccaatcagtaaattagctgttaaattaaacagtttt
cttttttttttttttttccattttttattaggtatttagctcatttacat
ttccaatgctataccaaaagtcccccttacccacccacccccactcccct
acccacccactccccccctttggccctggcgttcccctgtaccggggcac
acaaagtctgcgtgtccaatgggcctctctttccagtgatggccgactag
gccatcttttgatacatatgcagctagagtcaagagctcaggggtactgg
ttagttcataatgtttttccacctatagggttgaagatccctttagctcc
ttggatactttctctagctcctccattgggagccctgtgatccatccatt
agctgactgtgagcatccacttctgtgtttgctaggccccgggatagtct
cacaagagacagctacatctgggtcctttcgataaaatcttgctagtata
tgcaatggtgtcagcgtttggatgctgattatggggtggatccctggata
tggcagtctctacatggtccatcctttcatctcagctccaaactttgttt
ctgtaactccttccatgggt
gaattcagtccgttccttactgggttctatgttatacttggtaggggctt
gtgacttggaggatgtgtctgccaagtgaattagattaagtgactcctgg
gaagaattcgaatgggaaataagcactatggctatggagaaatgtttatc
cagacagacattaaaggaattagacatggtttcgaagacaaagcttgtca
ggatgggtcaactagatgaagaagctggtgagcagggctgaagagcctag
gcacatattgtttgaaaccccagcctttttgtcttgatgtttgaatgatt
taacaattgaggacatatttttttttaatttaaaaacagaatttctcaga
ggaagtaaagaaagttagctcaactactatcccctctggcaatcagagta
gatcttccccaaggaatggtcaagaattccttggaaggaattgccagttt
catacccaggaaccctgtataagtagagggtttggaaagaagaggctaaa
agtatttaaggagatatatgcagggtctatacagttctagctggagcaaa
accttctgatcatctgaccttacggagcatgaaactgaagcaacaagagg
gaaaagtactatattctgggtgtcatggatgagaaagagagctgagatga
aaacatggacaaaatcttctgatccaaagggaattatttattattattat
tattattattattaattaaacagagactgtcttcagtcttcaggttggtg
aatttatttctcggactggcaagaagggagctaacttcttattaaagtta
gtcaaatgatgaaatcccaagatcccggcttcctggagtttcaccagtga
tgaaaagtagcagtatttaggaggaatcagtgttcgactgattgtctaag
agactaacaggaaagaaaaggtaaaggacaggcaaggctgcagttgatcc
ttgcagcctttcacgacatttctccatgttctgggagcctccttcttgtc
gcatacatttctcattagaagaaaatctgaggttgttttctaagactatc
tgctgtcaggagatcatatgatgaaacctatgatgaatacattcctaagt
ctcagggtctgcttttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_74786718_74787844
seq2: B6Ng01-208N03.g_65_1182 (reverse)

seq1  TTAAAAGCAGACCCTGGAGGACTTAAGAATGTAATTCATCATAGGGTTTT  50
      ||||||||||||||||   |||||| |||||| ||||||||||||  |||
seq2  TTAAAAGCAGACCCTG--AGACTTAGGAATGT-ATTCATCATAGG--TTT  45

seq1  CATCATATGATCTCCCTGACAGCAGATAGGTCTTTAGAAAACAACCTCAG  100
      ||||||||||||| |||||||||||||| ||| |||||||||||||||||
seq2  CATCATATGATCT-CCTGACAGCAGATA-GTC-TTAGAAAACAACCTCAG  92

seq1  ATTTTCTTCTAAATGAGAAATGTATGCGACAAGAA-GAGGCTCCAAGAAA  149
      |||||||||| |||||||||||||||||||||||| |||||||| || ||
seq2  ATTTTCTTCT-AATGAGAAATGTATGCGACAAGAAGGAGGCTCCCAG-AA  140

seq1  CATGGAGAAATGTCGTGAAAGGCTGGCAAGGATCAACTGCAGCCTTGCCT  199
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CATGGAGAAATGTCGTGAAAGGCT-GCAAGGATCAACTGCAGCCTTGCCT  189

seq1  GTCCTTTACCTTTTCTTTCCTGTTAGTCTCTTAGACAATCAGTCG-ACAC  248
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTCCTTTACCTTTTCTTTCCTGTTAGTCTCTTAGACAATCAGTCGAACAC  239

seq1  TGATTCCTCCTAAATACTGCTACTTTTCATCACTGGTGAAACTCCAGGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCTCCTAAATACTGCTACTTTTCATCACTGGTGAAACTCCAGGAA  289

seq1  GCCGGGATCTTGGGATTTCATCATTTGACTAACTTTAATAAGAAGTTAGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGGATCTTGGGATTTCATCATTTGACTAACTTTAATAAGAAGTTAGC  339

seq1  TCCCTTCTTGCCAGTCCGAGAAATAAATTCACCAACCTGAAGACTGAAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTTGCCAGTCCGAGAAATAAATTCACCAACCTGAAGACTGAAGA  389

seq1  CAGTCTCTGTTTAATTAATAATAATAATAATAATAATAATAAATAATTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCTGTTTAATTAATAATAATAATAATAATAATAATAAATAATTCC  439

seq1  CTTTGGATCAGAAGATTTTGTCCATGTTTTCATCTCAGCTCTCTTTCTCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGATCAGAAGATTTTGTCCATGTTTTCATCTCAGCTCTCTTTCTCA  489

seq1  TCCATGACACCCAGAATATAGTACTTTTCCCTCTTGTTGCTTCAGTTTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGACACCCAGAATATAGTACTTTTCCCTCTTGTTGCTTCAGTTTCA  539

seq1  TGCTCCGTAAGGTCAGATGATCAGAAGGTTTTGCTCCAGCTAGAACTGTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCGTAAGGTCAGATGATCAGAAGGTTTTGCTCCAGCTAGAACTGTA  589

seq1  TAGACCCTGCATATATCTCCTTAAATACTTTTAGCCTCTTCTTTCCAAAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCCTGCATATATCTCCTTAAATACTTTTAGCCTCTTCTTTCCAAAC  639

seq1  CCTCTACTTATACAGGGTTCCTGGGTATGAAACTGGCAATTCCTTCCAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACTTATACAGGGTTCCTGGGTATGAAACTGGCAATTCCTTCCAAG  689

seq1  GAATTCTTGACCATTCCTTGGGGAAGATCTACTCTGATTGCCAGAGGGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGACCATTCCTTGGGGAAGATCTACTCTGATTGCCAGAGGGGA  739

seq1  TAGTAGTTGAGCTAACTTTCTTTACTTCCTCTGAGAAATTCTGTTTTTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTTGAGCTAACTTTCTTTACTTCCTCTGAGAAATTCTGTTTTTAA  789

seq1  ATTAAAAAAAAATATGTCCTCAATTGTTAAATCATTCAAACATCAAGACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAAAAATATGTCCTCAATTGTTAAATCATTCAAACATCAAGACA  839

seq1  AAAAGGCTGGGGTTTCAAACAATATGTGCCTAGGCTCTTCAGCCCTGCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCTGGGGTTTCAAACAATATGTGCCTAGGCTCTTCAGCCCTGCTC  889

seq1  ACCAGCTTCTTCATCTAGTTGACCCATCCTGACAAGCTTTGTCTTCGAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTTCTTCATCTAGTTGACCCATCCTGACAAGCTTTGTCTTCGAAA  939

seq1  CCATGTCTAATTCCTTTAATGTCTGTCTGGATAAACATTTCTCCATAGCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCTAATTCCTTTAATGTCTGTCTGGATAAACATTTCTCCATAGCC  989

seq1  ATAGTGCTTATTTCCCATTCGAATTCTTCCCAGGAGTCACTTAATCTAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGCTTATTTCCCATTCGAATTCTTCCCAGGAGTCACTTAATCTAAT  1039

seq1  TCACTTGGCAGACACATCCTCCAAGTCACAAGCCCCTACCAAGTATAACA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGGCAGACACATCCTCCAAGTCACAAGCCCCTACCAAGTATAACA  1089

seq1  TAGAACCCAGTAAGGAACGGACTGAATTC  1127
      |||||||||||||||||||||||||||||
seq2  TAGAACCCAGTAAGGAACGGACTGAATTC  1118