BAC Information

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BAC

Clone NameB6Ng01-209C06
Chromosome14 (Build37)
Map Location 22,877,509 - 22,878,522
singlet/doubletsinglet
Overlap gene1700112E06Rik
Upstream geneAdk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075
Downstream geneEG435392, LOC665068
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209C06.bB6Ng01-209C06.g
ACCGA027838GA027839
length1,014191
definitionB6Ng01-209C06.b B6Ng01-209C06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttatatctagcctagcacctggcaagcagtcttgctataata
acaacagcagcaaacaacaataacaacaacagcagcagcaacactaaaaa
caactctcttgaaaccccttaaatatcttctgggtttatcagaacacttt
accatcccctggccatagctttcaattttcttttgtgggtcttatttcct
tctttctgtgttttctatgagatgtttctccctgagaaccatctgggaag
cctccttggaggttattataggtgtagtgtgactttggggggacagttag
agctattggtgggatccagcactttggagacagcaagacccaggcagatg
caatggagtagcagaggaagccagagtaggtctcttagcttcaagctttg
cctcccagtgttaaggggatttttctgagaggtcactggatcaacaagtc
ctccccttagtcaagtgaagagtctttttttccctaaggaaacccttaag
aacctctgaagtccattgtttcagataattcatggtttgctatccaggct
cctttaaagtacaaagagcccaaaatacaaacctatctcctcacaataga
atctactcttgttatggaaatcctagggattttacattataatactcacc
tatcaggcatggagagaaatgaaacttctctctgtcattgcacttgaggt
gtccctgctgtctgaaagtgagcccaaagcaggaggtgtcagccaatccc
ttgcctagtaaacgatgaaccactgcacacaatggcttactaactcctcc
ctctaaggcagtgcttttaaatgtttttatcctgaaggaaggcgtagtgt
tgaaagtgatttttggttatgtttttctgaggtggtctaagaccgcgttt
aaggaagatgccctccctcccccccctcccaatacagttgactttctgct
tgaacttgggtgtagcatttggacatacccacacttctcagaaatctctg
tcctgcccaccaca

acagtggctacaactgcacaagctcaggccaccccaaagagcagcattgg
agtccccaagaggcttcccatgttctagtagatggtcccatacccatgca
cacacaggcagcactagatgacttcattgggtttaaaaacagagctcatg
atgttgggggaagaaaatggtgggggtttataggagaaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22877509_22878522
seq2: B6Ng01-209C06.b_47_1060

seq1  GAATTCTTTTATATCTAGCCTAGCACCTGGCAAGCAGTCTTGCTATAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATATCTAGCCTAGCACCTGGCAAGCAGTCTTGCTATAATA  50

seq1  ACAACAGCAGCAAACAACAATAACAACAACAGCAGCAGCAACACTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGCAGCAAACAACAATAACAACAACAGCAGCAGCAACACTAAAAA  100

seq1  CAACTCTCTTGAAACCCCTTAAATATCTTCTGGGTTTATCAGAACACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCTTGAAACCCCTTAAATATCTTCTGGGTTTATCAGAACACTTT  150

seq1  ACCATCCCCTGGCCATAGCTTTCAATTTTCTTTTGTGGGTCTTATTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCCCTGGCCATAGCTTTCAATTTTCTTTTGTGGGTCTTATTTCCT  200

seq1  TCTTTCTGTGTTTTCTATGAGATGTTTCTCCCTGAGAACCATCTGGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGTGTTTTCTATGAGATGTTTCTCCCTGAGAACCATCTGGGAAG  250

seq1  CCTCCTTGGAGGTTATTATAGGTGTAGTGTGACTTTGGGGGGACAGTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTGGAGGTTATTATAGGTGTAGTGTGACTTTGGGGGGACAGTTAG  300

seq1  AGCTATTGGTGGGATCCAGCACTTTGGAGACAGCAAGACCCAGGCAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTGGTGGGATCCAGCACTTTGGAGACAGCAAGACCCAGGCAGATG  350

seq1  CAATGGAGTAGCAGAGGAAGCCAGAGTAGGTCTCTTAGCTTCAAGCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAGTAGCAGAGGAAGCCAGAGTAGGTCTCTTAGCTTCAAGCTTTG  400

seq1  CCTCCCAGTGTTAAGGGGATTTTTCTGAGAGGTCACTGGATCAACAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAGTGTTAAGGGGATTTTTCTGAGAGGTCACTGGATCAACAAGTC  450

seq1  CTCCCCTTAGTCAAGTGAAGAGTCTTTTTTTCCCTAAGGAAACCCTTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTTAGTCAAGTGAAGAGTCTTTTTTTCCCTAAGGAAACCCTTAAG  500

seq1  AACCTCTGAAGTCCATTGTTTCAGATAATTCATGGTTTGCTATCCAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTGAAGTCCATTGTTTCAGATAATTCATGGTTTGCTATCCAGGCT  550

seq1  CCTTTAAAGTACAAAGAGCCCAAAATACAAACCTATCTCCTCACAATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAGTACAAAGAGCCCAAAATACAAACCTATCTCCTCACAATAGA  600

seq1  ATCTACTCTTGTTATGGAAATCCTAGGGATTTTACATTATAATACTCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTCTTGTTATGGAAATCCTAGGGATTTTACATTATAATACTCACC  650

seq1  TATCAGGCATGGAGAGAAATGAAACTTCTCTCTGTCATTGCACTTGAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGCATGGAGAGAAATGAAACTTCTCTCTGTCATTGCACTTGAGGT  700

seq1  GTCCCTGCTGTCTGAAAGTGAGCCCAAAGCAGGAGGTGTCAGCCAATCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGCTGTCTGAAAGTGAGCCCAAAGCAGGAGGTGTCAGCCAATCCC  750

seq1  TTGCCTAGTAAACGATGAACCACTGCACACAATGGCTTACTAACTCCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAGTAAACGATGAACCACTGCACACAATGGCTTACTAACTCCTCC  800

seq1  CTCTAAGGCAGTGCTTTTAAATGTTTTTATCCTGAAGGAAGGCGTAGGTG  850
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTCTAAGGCAGTGCTTTTAAATGTTTTTATCCTGAAGGAAGGCGTA-GTG  849

seq1  TTGAAAGTGATTTTTGGTTATGTTTTTCTGAGGTGGTCTAAGACCGCGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGTGATTTTTGGTTATGTTTTTCTGAGGTGGTCTAAGACCGCGTT  899

seq1  TAAGGAAGA-GCC--CCCCCCCCCCCCTCCCAATACAGTTGAC-TTCTGC  946
      ||||||||| |||  ||| |||||||||||||||||||||||| ||||||
seq2  TAAGGAAGATGCCCTCCCTCCCCCCCCTCCCAATACAGTTGACTTTCTGC  949

seq1  TTGAACTTGGGTGGAAGCATTTGGACATTCCCACACTTCCCCAGAAATCT  996
      |||||||||||| | ||||||||||||| ||||||||| | |||||||||
seq2  TTGAACTTGGGT-GTAGCATTTGGACATACCCACACTT-CTCAGAAATCT  997

seq1  CTGTTCTGGCCCACCACA  1014
      |||| || ||||||||||
seq2  CTGTCCT-GCCCACCACA  1014


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