BAC Information

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BAC

Clone NameB6Ng01-210F24
Chromosome14 (Build37)
Map Location 93,919,825 - 93,920,943
singlet/doubletsinglet
Overlap genePcdh9
Upstream geneLOC638252, LOC668566
Downstream geneLOC100043356
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210F24.bB6Ng01-210F24.g
ACCGA028729GA028730
length1,1421,102
definitionB6Ng01-210F24.b B6Ng01-210F24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttagtgcacacctttaatactaaacaatgatatctaattgagt
gactaatcagagaaagatttgacagaaagacttagagattgatactgcca
actctcagaagaaaagtaattttgagagcagcacaggaagaatgtaggca
gttcagtcagttgggagtcagtggagtgcagtggaattgagtttactcat
gagcacatacacttcagtgtaggtcagcagaggcagttgaagacagagaa
ttagaaagcgccagatgatttggacaaattgccagagttagtttgaagcc
aaacagcaattcagtgagaagctgagaaaaaccagtatgagtcagtcagc
ttggaaaggagtttgagccagaatacctgagttgaatcagtcagccagag
tacagaaagaactagaaaggatgaatttatttagcaataagcctctgaga
caacaattatatcaaaggaataaatgttacatttataccagacacagcat
tatgggacaagaaaccttccaagatgactttagttgactttttcttggtc
atctactaccaggcatggggtctctacttaagagtggtttgtatgtagag
tgagactccatcaaagaaaactaaatttggatttaaagcaattatctatt
ggagatagcttctgggttatggctacgacctgtgtccacttttcttttca
gtactgggatacccatgcaaagacaaggcatgctgccatagtctgtatga
gtttacatacatcagctctgctcattttggaaggtcttatttcattggtg
tcctccacccccagtctctcctatagtctgtcaggcctctactttcagta
gggttcctttaagtccgaggccacagattaatggagacattctatttaat
gttctaaatcccatcaatctctgcatattgtatactttgtgaacttctct
attgctctcatctgctgatgggaggaagcttctctggtgaaagcttgtaa
gggcattcatctatgatatggaaaattgttgttttatttgctaattattt
ttctttaatagaaaggtggtagttgggattcccccattagggggtggtct
ctctcggttcatagtgattggtcacctatagctctactaatt

gaattctgaggagtatttttgggagcacaatgtcataaatcgttcagttc
tattttcccagcacataactggaatctaggcgacagcacataattggaaa
gttctctttaactgctttctaaggtattttcagttttgtttgtctccagt
caatttaaatataacccttaataggtttggtcgaaaaccattttatttac
tcctatcacacagataaaatatccaaattctttaacatggtggacaaggt
tccatcctgagccttccacatctatctctgccaggttgactgagagcccc
attgggtagctctgggttgacttacattaatccaacaaatgcaggcatct
gcttgacctctttatacaaccaactccctttccttccctcctcatccccc
ctgagtcttctttcccttcatcttttactgcttttctctatttgtttact
cttttataagaacctggtttcaaactaactatgtccttgtatttgccctg
ctacttgtagctcacgatcctacacgagacagagcctatcacgtcttctg
ggtattttcagagccatttattgtcttctgttttaataattctgtgcgct
gtaattgcttgtttacacgtctgccttcctgattaggtaacagctttccg
tacctctattgatttttgttccatagtgcttaggaggttgtctagctggg
aggacacacttaatgcttcatcaacgctagatcttctcctgacttcctct
gctatcaaacttattatgtctagatactcactgctgatatttatttaaaa
attaatgctaattattggtaaatcgggctttgaagactgtactagtcagg
ttcgtaaatatcaggtaaattaaaaataacaacctttccaaaacaaacac
catttacagctcaaccggcatcacttttatgaatctgtgacttgatgaaa
gacagattttttttcttaaatttaaaaggggggactgtcataaatacaat
cctttgctagccaattatcattaaattaaaagttaactatgcacattcat
cacatttagggtgctagactgtcttcctcctaagctaaatgtcattagat
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_93919825_93920943
seq2: B6Ng01-210F24.g_67_1168

seq1  GAATTCTGAGGAGTATTTTTGGGAGCACAATGTCATAAATCGTTCAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGGAGTATTTTTGGGAGCACAATGTCATAAATCGTTCAGTTC  50

seq1  TATTTTCCCAGCACATAACTGGAATCTAGGCGACAGCACATAATTGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCCAGCACATAACTGGAATCTAGGCGACAGCACATAATTGGAAA  100

seq1  GTTCTCTTTAACTGCTTTCTAAGGTATTTTCAGTTTTGTTTGTCTCCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTTTAACTGCTTTCTAAGGTATTTTCAGTTTTGTTTGTCTCCAGT  150

seq1  CAATTTAAATATAACCCTTAATAGGTTTGGTCGAAAACCATTTTATTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAAATATAACCCTTAATAGGTTTGGTCGAAAACCATTTTATTTAC  200

seq1  TCCTATCACACAGATAAAATATCCAAATTCTTTAACATGGTGGACAAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATCACACAGATAAAATATCCAAATTCTTTAACATGGTGGACAAGGT  250

seq1  TCCATCCTGAGCCTTCCACATCTATCTCTGCCAGGTTGACTGAGAGCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTGAGCCTTCCACATCTATCTCTGCCAGGTTGACTGAGAGCCCC  300

seq1  ATTGGGTAGCTCTGGGTTGACTTACATTAATCCAACAAATGCAGGCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTAGCTCTGGGTTGACTTACATTAATCCAACAAATGCAGGCATCT  350

seq1  GCTTGACCTCTTTATACAACCAACTCCCTTTCCTTCCCTCCTCATCCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGACCTCTTTATACAACCAACTCCCTTTCCTTCCCTCCTCATCCCCC  400

seq1  CTGAGTCTTCTTTCCCTTCATCTTTTACTGCTTTTCTCTATTTGTTTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCTTCTTTCCCTTCATCTTTTACTGCTTTTCTCTATTTGTTTACT  450

seq1  CTTTTATAAGAACCTGGTTTCAAACTAACTATGTCCTTGTATTTGCCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATAAGAACCTGGTTTCAAACTAACTATGTCCTTGTATTTGCCCTG  500

seq1  CTACTTGTAGCTCACGATCCTACACGAGACAGAGCCTATCACGTCTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTGTAGCTCACGATCCTACACGAGACAGAGCCTATCACGTCTTCTG  550

seq1  GGTATTTTCAGAGCCATTTATTGTCTTCTGTTTTAATAATTCTGTGCGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTCAGAGCCATTTATTGTCTTCTGTTTTAATAATTCTGTGCGCT  600

seq1  GTAATTGCTTGTTTACACGTCTGCCTTCCTGATTAGGTAACAGCTTTCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGCTTGTTTACACGTCTGCCTTCCTGATTAGGTAACAGCTTTCCG  650

seq1  TACCTCTATTGATTTTTGTTCCATAGTGCTTAGGAGGTTGTCTAGCTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTATTGATTTTTGTTCCATAGTGCTTAGGAGGTTGTCTAGCTGGG  700

seq1  AGGACACACTTAATGCTTCATCAACGCTAGATCTTCTCCTGACTTCCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACACTTAATGCTTCATCAACGCTAGATCTTCTCCTGACTTCCTCT  750

seq1  GCTATCAAACTTATTATGTCTAGATACTCACTGCTGATATTTATTTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCAAACTTATTATGTCTAGATACTCACTGCTGATATTTATTTAAAA  800

seq1  ATTAATGCTAATTATTGGTAAAATCGGGCTTTGAAGACTGTACTAGTCAG  850
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATTAATGCTAATTATTGGT-AAATCGGGCTTTGAAGACTGTACTAGTCAG  849

seq1  GTTCGTAAATATCAGGTAAATTAAAAATAACAACCTTTCCAAAACAAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGTAAATATCAGGTAAATTAAAAATAACAACCTTTCCAAAACAAACA  899

seq1  CCATTTACAGCTCAACCGGCATCACTTTTATGAATCTGTGACTTGATGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTACAGCTCAACCGGCATCACTTTTATGAATCTGTGACTTGATGAA  949

seq1  AGACAGATTTTTTTTTCTTAAAATTTAAAAAGGGGGGACTGTCATAAATA  1000
      ||||||| ||||||||||||||  || |||||||||||||||||||||||
seq2  AGACAGA-TTTTTTTTCTTAAA--TTTAAAAGGGGGGACTGTCATAAATA  996

seq1  CAATCCTTTGCTAGCCAAATTAATCATTAAATTTAAAAGTTTAACTATGC  1050
      ||||||||||||||||||  | ||||||||| ||||||| ||||||||||
seq2  CAATCCTTTGCTAGCCAA--TTATCATTAAA-TTAAAAG-TTAACTATGC  1042

seq1  ACATTTCATCAACCATTTTTAGGGTGCTTAGAACTGTCTTCTCCCAAAGC  1100
      ||| |||||||  ||  |||||||||| ||| |||||||||  || ||||
seq2  ACA-TTCATCA--CA--TTTAGGGTGC-TAG-ACTGTCTTCCTCCTAAGC  1085

seq1  TAAATGTTCATTTAGATAA  1119
      |||||| ||| ||||||||
seq2  TAAATG-TCA-TTAGATAA  1102


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