BAC Information

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BAC

Clone NameB6Ng01-210J15
Chromosome14 (Build37)
Map Location 49,823,800 - 49,824,921
singlet/doubletsinglet
Overlap genenone
Upstream genePeli2, EG624367, LOC100041831, 6720456H20Rik, 4930572G02Rik, Otx2, LOC100041864, LOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12
Downstream gene1700011H14Rik, Slc35f4, 3632451O06Rik, LOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210J15.bB6Ng01-210J15.g
ACCGA028901GA028902
length1,1741,116
definitionB6Ng01-210J15.b B6Ng01-210J15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaatggctgagaagcacctgaaaaaata
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattacaaacttgtacaaccactctggaaatcattctggcggttcctca
gaaaattggccatagtactactggaggatcccgcaatacctcttctgggc
atatatccagaagatgttccaactggtaagaaggacacatgctgcactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaaatgtggtacatttacacaat
ggagtactactcagctattaagaggaatgaatttatgaaattcctaggca
aatggttggacctggagggcatcatcctgagtgaggcaacccaatcacaa
aagaactcaaatgatatgtactcactgataagtggatattagcccagaaa
cttagtatacctgagatataagatacaatttgcaaaacacatgaaactga
agaagaaggaagactaaagtgtggacactttgccccttcttagaattggg
aacaatcacccatggaaggagttacagagacaaagtttggagctgagaca
aaaggatggaccatctagagactgccatatccagggatccatcccataac
cagcctccaaacgatgacaccattgtatacattagcaagagtttgctgaa
aggaccctaatatagctgtctcttgtgagactaggccgcgggcctagcaa
acacagaagtggatgctcacagtcagctattggatggatcacagggcccc
tgatggaggagctagagaaagtatccaaggaggtaaagagatctgcacct
gtagtggacaacattatgaaccagtacctggagctcttgactcttagctg
caatatgtatcaaaaacatgaccttagtcggccatcactggaaagaagag
gtccatggacatgccaaacttaattgcccaagttacagggaccgcaggtg
ctaaatgtggcaatggggtgcgct
gaattctatagataagggaaggaagagagaatgacacttgcaataattac
ccaggtatcaaatgaccatggaaactgtctaaaattcagtgtgcagtaaa
acattatgctaggcaacagcttgcattaggactttgtttcccttccgggg
aggatgttattgagggaagcacacattgtcatgtgtgaaagtaggaagcc
agcagacttacttacgtttaagttctaaataccaaggtcctttacctagg
agtgctgtctttgcttcctggagttgtattctttgctcatacgacaatgt
attcttttatttaatagcatttgatccagttggtagccatacactatctt
tgtagctttgcattaatggatgcctcctcactctactataaaaaccatgg
gaagagagaaggcatttgcttttattcaatttcccctgttctttgcacag
tgtctgatatgaaggaatttgttgaaagagtaactaatgataagatatag
gaaggaaatgggcccaattttgtcacagactgggactttgagaaaaaccc
aaacaaaccataggtcttggttcttctgccttacccctacctcatctccc
ttctctaagtaaaacttattctttgtggtggttcgaatagattagccccc
ataggctcatgtgtttgaatgcttggccacgggggatggcacttttatta
ggatatgtgttcttattggagtaggtgttgcctgttggaagtgtgtcatt
cattgtgtaggtgggctttgaggctatgctcagactccacccaatataag
agagtctcttcctggctgtcttcaggatcaagatgtggagctctcagcat
ctccagcatgtttgctagcacactgccatgctccctgctatgatgataat
ggactcaacctctgaaactgtaagccagtcccattgaatgtttgcattta
tttattttatttttttacttttgggtttttcgagacaggatttctctgtg
tagccctggctgtactgaactcattctgtagaccaggcctgctttaactc
agaatccgtctgcttctgccttctagtgcttggattaaggcgtgctccac
cacgtccagcctgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_49823800_49824921
seq2: B6Ng01-210J15.g_65_1180

seq1  GAATTCTATAGATAAGGGAAGGAAGAGAGAATGACACTTGCAATAATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAGATAAGGGAAGGAAGAGAGAATGACACTTGCAATAATTAC  50

seq1  CCAGGTATCAAATGACCATGGAAACTGTCTAAAATTCAGTGTGCAGTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTATCAAATGACCATGGAAACTGTCTAAAATTCAGTGTGCAGTAAA  100

seq1  ACATTATGCTAGGCAACAGCTTGCATTAGGACTTTGTTTCCCTTCCGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATGCTAGGCAACAGCTTGCATTAGGACTTTGTTTCCCTTCCGGGG  150

seq1  AGGATGTTATTGAGGGAAGCACACATTGTCATGTGTGAAAGTAGGAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTTATTGAGGGAAGCACACATTGTCATGTGTGAAAGTAGGAAGCC  200

seq1  AGCAGACTTACTTACGTTTAAGTTCTAAATACCAAGGTCCTTTACCTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACTTACTTACGTTTAAGTTCTAAATACCAAGGTCCTTTACCTAGG  250

seq1  AGTGCTGTCTTTGCTTCCTGGAGTTGTATTCTTTGCTCATACGACAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGTCTTTGCTTCCTGGAGTTGTATTCTTTGCTCATACGACAATGT  300

seq1  ATTCTTTTATTTAATAGCATTTGATCCAGTTGGTAGCCATACACTATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTATTTAATAGCATTTGATCCAGTTGGTAGCCATACACTATCTT  350

seq1  TGTAGCTTTGCATTAATGGATGCCTCCTCACTCTACTATAAAAACCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTTTGCATTAATGGATGCCTCCTCACTCTACTATAAAAACCATGG  400

seq1  GAAGAGAGAAGGCATTTGCTTTTATTCAATTTCCCCTGTTCTTTGCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAGAAGGCATTTGCTTTTATTCAATTTCCCCTGTTCTTTGCACAG  450

seq1  TGTCTGATATGAAGGAATTTGTTGAAAGAGTAACTAATGATAAGATATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGATATGAAGGAATTTGTTGAAAGAGTAACTAATGATAAGATATAG  500

seq1  GAAGGAAATGGGCCCAATTTTGTCACAGACTGGGACTTTGAGAAAAACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAATGGGCCCAATTTTGTCACAGACTGGGACTTTGAGAAAAACCC  550

seq1  AAACAAACCATAGGTCTTGGTTCTTCTGCCTTACCCCTACCTCATCTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACCATAGGTCTTGGTTCTTCTGCCTTACCCCTACCTCATCTCCC  600

seq1  TTCTCTAAGTAAAACTTATTCTTTGTGGTGGTTCGAATAGATTAGCCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAAGTAAAACTTATTCTTTGTGGTGGTTCGAATAGATTAGCCCCC  650

seq1  ATAGGCTCATGTGTTTGAATGCTTGGCCACGGGGGATGGCACTTTTATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCTCATGTGTTTGAATGCTTGGCCACGGGGGATGGCACTTTTATTA  700

seq1  GGATATGTGTTCTTATTGGAGTAGGTGTTGCCTGTTGGAAGTGTGTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGTGTTCTTATTGGAGTAGGTGTTGCCTGTTGGAAGTGTGTCATT  750

seq1  CATTGTGTAGGTGGGCTTTGAGGCTATGCTCAGACTCCACCCAATATAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGTAGGTGGGCTTTGAGGCTATGCTCAGACTCCACCCAATATAAG  800

seq1  AGAGTCTCTTCCTGGCTGTCTTCAGGATCAAGATGTGGAGCTCTCAGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTCTTCCTGGCTGTCTTCAGGATCAAGATGTGGAGCTCTCAGCAT  850

seq1  CTCCAGCATGTTTGCTAGCACACTGCCATGCTCCCTGCTATGATGATAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCATGTTTGCTAGCACACTGCCATGCTCCCTGCTATGATGATAAT  900

seq1  GGACTCAACCTCTGAAACTGTAAGCCAGTCCCATTGAAATGTTTGCATTT  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGACTCAACCTCTGAAACTGTAAGCCAGTCCCATTG-AATGTTTGCATTT  949

seq1  ATTTATTTTA-TTTTTTACTTTT-GGTTTTTCGAGACAGGGTTTCTCTGT  998
      |||||||||| |||||||||||| |||||||||||||||| |||||||||
seq2  ATTTATTTTATTTTTTTACTTTTGGGTTTTTCGAGACAGGATTTCTCTGT  999

seq1  GTAGCCCTGCCTGTACTGGAACTCATTCTGTAGACCAGGCTGGCTTTAAA  1048
      ||||||||| ||||||| ||||||||||||||||||||||  ||||| ||
seq2  GTAGCCCTGGCTGTACT-GAACTCATTCTGTAGACCAGGCCTGCTTT-AA  1047

seq1  CTCAGGAATCCGTCTGCCTCTGCCTCCTAAGTGCTGGGATTAAAGGCGTG  1098
      |||| |||||||||||| ||||||| || |||||| ||||| ||||||||
seq2  CTCA-GAATCCGTCTGCTTCTGCCTTCT-AGTGCTTGGATT-AAGGCGTG  1094

seq1  CTCCACCACCGCCCAGCCGTGTTT  1122
      |||||||| || |||||| |||||
seq2  CTCCACCA-CGTCCAGCC-TGTTT  1116