BAC Information

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BAC

Clone NameB6Ng01-211F19
Chromosome14 (Build37)
Map Location 52,050,686 - 52,119,934
singlet/doubletdoublet
Overlap geneEG638695, Vmn2r88, LOC100042247, V2r10, LOC100043041
Upstream geneOlfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238, Vmn2r-ps110, LOC100042224
Downstream geneEG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211F19.bB6Ng01-211F19.g
ACCGA029449GA029450
length6961,110
definitionB6Ng01-211F19.b B6Ng01-211F19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,119,239 - 52,119,934)(52,050,686 - 52,051,800)
sequence
gaattcttgttttttcttttttttttttttttttagaattttagggtttt
aaaaataatgtttattaagcattttaaagtccttttttcagctttttacg
actcttttagggtttgtatggggcatgccttacatcccaacacttgggag
gcagaggtaggcagatttttgagttcgaggtctgcatggtctacagagtg
aactccaggacaggtagggatacacagaggaacccagtcaccaaaaactc
aaaagaaaagaaaaagatttttaggtttctttaaggttttagggtgcttt
tagggctttttttttcaatgttttgggggggatctttttaaggccttgag
gttcctcttttttttttttttttttttttttacagttttagggttttctg
ggtctttttagtgttcttgagtatttcaaaattatggggtttttttttgt
ttttgttttgtttttgtttttgtttttgttttttagggttttagggtttt
tatagttttttaaaaagattttagggtgttttagtattttgggttaatta
ttttttaagaattttatatttttttaggctctttggaattttttttggcc
tttcggggtttttaaaaatagttttatgtttttttcgggttctagaagga
tttttaacattatagggttttttttttttagggttttaggaaatat
gaattcatgatacagtgaaagatttcagggaacactgagtgtagggttat
gtatttataaaatatccaacaacactgtggtttatgaatatatcttctct
aaatgtaataatctactttatatcaacattgaaccaaaaatggtttagga
aatcgttgctttttgaaaaaattacgaatgataaaatcaacaaagttaaa
taaacaaagaaatagatgcttggttttattttcccttaaatctttatgta
gattacaaaacaaaagtaatgttgtgcagtgatgttcttcatatttcatt
ctcagcagcagtgcaagtcttcttccaacacacttgaaaaccttgtcaat
agaatttctaaagtagcactaacaaacctttcctttcgacgtcagatacc
gagcagtttgtgaattgtccaggagaccagtatgcaaacacagagcagaa
caaatgcattccaaaagccatgatcattctaggctacggagaccccttgg
ggatggatacttccttaatagcctccgtttctttgcattcacagctgtgg
tactttgggtctttgtgaagcaccatggcactcctcttgtgaaggccaat
aacagaatcctcagctacctattactcatgtcactcgtgttctgttttct
gtgctcctttttcttcgttggtcatcctaacagagcaacctgtatcttac
agcaaatcacatttggaattgtattcacggtggctgtttccacagttctg
gccaaaacaatcactgtgtttctggctttcaaatcacaggacctggaaga
aggttgaggaacttcctggtatcaggtgcacccaaccacattatccccat
atgttccttattacaatgtattctgtgtgcaatctggctagcagtttctc
ctccctttgttgatattgatgaacactctgagcatggccacaccatcatt
gtgttcaacaagggctcagttactgcattctactgtgtcctgggatactt
ggactgcctggcccttgagctgcactggtggctttctggtaaagaatatg
cctgacacattcatgagccagttcttgacctcagtattgctagtgttctg
caatgtctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_52119239_52119934
seq2: B6Ng01-211F19.b_45_740 (reverse)

seq1  ATATATCCTAAAACCCTAAAAAAAAAAAACCCTATAATGTTAAAAATCCT  50
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCCTAAAACCCTAAAAAAAAAAAACCCTATAATGTTAAAAATCCT  50

seq1  TCTAGAACCCGAAAAAAACATAAAACTATTTTTAAAAACCCCGAAAGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAACCCGAAAAAAACATAAAACTATTTTTAAAAACCCCGAAAGGCC  100

seq1  AAAAAAAATTCCAAAGAGCCTAAAAAAATATAAAATTCTTAAAAAATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATTCCAAAGAGCCTAAAAAAATATAAAATTCTTAAAAAATAAT  150

seq1  TAACCCAAAATACTAAAACACCCTAAAATCTTTTTAAAAAACTATAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCAAAATACTAAAACACCCTAAAATCTTTTTAAAAAACTATAAAAA  200

seq1  CCCTAAAACCCTAAAAAACAAAAACAAAAACAAAAACAAAACAAAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAAACCCTAAAAAACAAAAACAAAAACAAAAACAAAACAAAAACAA  250

seq1  AAAAAAACCCCATAATTCTGAAATACTCAAGAACACTAAAAAGACCCAGA  300
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAAAAAACCCCATAATTTTGAAATACTCAAGAACACTAAAAAGACCCAGA  300

seq1  AAACCCTAAAACTGTAAAAAAAAAAAAAAAAAAAAAAAAGAGGAACCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTAAAACTGTAAAAAAAAAAAAAAAAAAAAAAAAGAGGAACCTCA  350

seq1  AGGCCTTAAAAAGATCCCCCCCAAAACATTGAAAAAAAAAGCCCTAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTAAAAAGATCCCCCCCAAAACATTGAAAAAAAAAGCCCTAAAAG  400

seq1  CACCCTAAAACCTTAAAGAAACCTAAAAATCTTTTTCTTTTCTTTTGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTAAAACCTTAAAGAAACCTAAAAATCTTTTTCTTTTCTTTTGAGT  450

seq1  TTTTGGTGACTGGGTTCCTCTGTGTATCCCTACCTGTCCTGGAGTTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTGACTGGGTTCCTCTGTGTATCCCTACCTGTCCTGGAGTTCACT  500

seq1  CTGTAGACCATGCAGACCTCGAACTCAAAAATCTGCCTACCTCTGCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGACCATGCAGACCTCGAACTCAAAAATCTGCCTACCTCTGCCTCC  550

seq1  CAAGTGTTGGGATGTAAGGCATGCCCCATACAAACCCTAAAAGAGTCGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTTGGGATGTAAGGCATGCCCCATACAAACCCTAAAAGAGTCGTA  600

seq1  AAAAGCTGAAAAAAGGACTTTAAAATGCTTAATAAACATTATTTTTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTGAAAAAAGGACTTTAAAATGCTTAATAAACATTATTTTTAAAA  650

seq1  CCCTAAAATTCTAAAAAAAAAAAAAAAAAAGAAAAAACAAGAATTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAAATTCTAAAAAAAAAAAAAAAAAAGAAAAAACAAGAATTC  696

seq1: chr14_52050686_52051800
seq2: B6Ng01-211F19.g_63_1172

seq1  GAATTCATGATACAGTGAAAGATTTCAGGGAACACTGAGTGTAGGGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGATACAGTGAAAGATTTCAGGGAACACTGAGTGTAGGGTTAT  50

seq1  GTATTTATAAAATATCCAACAACACTGTGGTTTATGAATATATCTTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTATAAAATATCCAACAACACTGTGGTTTATGAATATATCTTCTCT  100

seq1  AAATGTAATAATCTACTTTATATCAACATTGAACCAAAAATGGTTTAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAATAATCTACTTTATATCAACATTGAACCAAAAATGGTTTAGGA  150

seq1  AATCGTTGCTTTTTGAAAAAATTACGAATGATAAAATCAACAAAGTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGTTGCTTTTTGAAAAAATTACGAATGATAAAATCAACAAAGTTAAA  200

seq1  TAAACAAAGAAATAGATGCTTGGTTTTATTTTCCCTTAAATCTTTATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAAGAAATAGATGCTTGGTTTTATTTTCCCTTAAATCTTTATGTA  250

seq1  GATTACAAAACAAAAGTAATGTTGTGCAGTGATGTTCTTCATATTTCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACAAAACAAAAGTAATGTTGTGCAGTGATGTTCTTCATATTTCATT  300

seq1  CTCAGCAGCAGTGCAAGTCTTCTTCCAACACACTTGAAAACCTTGTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAGCAGTGCAAGTCTTCTTCCAACACACTTGAAAACCTTGTCAAT  350

seq1  AGAATTTCTAAAGTAGCACTAACAAACCTTTCCTTTCGACGTCAGATACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCTAAAGTAGCACTAACAAACCTTTCCTTTCGACGTCAGATACC  400

seq1  GAGCAGTTTGTGAATTGTCCAGGAGACCAGTATGCAAACACAGAGCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTTTGTGAATTGTCCAGGAGACCAGTATGCAAACACAGAGCAGAA  450

seq1  CAAATGCATTCCAAAAGCCATGATCATTCTAGGCTACGGAGACCCCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCATTCCAAAAGCCATGATCATTCTAGGCTACGGAGACCCCTTGG  500

seq1  GGATGGATACTTCCTTAATAGCCTCCGTTTCTTTGCATTCACAGCTGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGATACTTCCTTAATAGCCTCCGTTTCTTTGCATTCACAGCTGTGG  550

seq1  TACTTTGGGTCTTTGTGAAGCACCATGGCACTCCTCTTGTGAAGGCCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGGGTCTTTGTGAAGCACCATGGCACTCCTCTTGTGAAGGCCAAT  600

seq1  AACAGAATCCTCAGCTACCTATTACTCATGTCACTCGTGTTCTGTTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATCCTCAGCTACCTATTACTCATGTCACTCGTGTTCTGTTTTCT  650

seq1  GTGCTCCTTTTTCTTCGTTGGTCATCCTAACAGAGCAACCTGTATCTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCCTTTTTCTTCGTTGGTCATCCTAACAGAGCAACCTGTATCTTAC  700

seq1  AGCAAATCACATTTGGAATTGTATTCACGGTGGCTGTTTCCACAGTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATCACATTTGGAATTGTATTCACGGTGGCTGTTTCCACAGTTCTG  750

seq1  GCCAAAACAATCACTGTGTTTCTGGCTTTCAAATCACAGGACCTGGAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAACAATCACTGTGTTTCTGGCTTTCAAATCACAGGACCTGGAAGA  800

seq1  AGGTTGAGGAACTTCCTGGTATCAGGTGCACCCAACCACATTATCCCCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGAGGAACTTCCTGGTATCAGGTGCACCCAACCACATTATCCCCAT  850

seq1  ATGTTCCTTATTACAATGTATTCTGTGTGCAATCTGGCTAGCAGTTTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCTTATTACAATGTATTCTGTGTGCAATCTGGCTAGCAGTTTCTC  900

seq1  CTCCCTTTGTTGATATTGATGAACACTCTGAGCATGGCCACACCATCATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTTGTTGATATTGATGAACACTCTGAGCATGGCCACACCATCATT  950

seq1  GTGTTCAACAAGGGCTCAGTTACTGCATTCTACTGTGTCCTGGGATACTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCAACAAGGGCTCAGTTACTGCATTCTACTGTGTCCTGGGATACTT  1000

seq1  GGACTGCCTGGCCCTTGGAAGCTGCACT-GTGGCTTTCTTGGTAAAGAAT  1049
      |||||||||||||||||  ||||||||| ||||||||| |||||||||||
seq2  GGACTGCCTGGCCCTTG--AGCTGCACTGGTGGCTTTC-TGGTAAAGAAT  1047

seq1  ATGCCTGACACATTCAATGAAGCCAAGTTCTTGACCTTCAGTA-TGCTAG  1098
      ||||||||||||||| ||| |||| ||||||||||| |||||| ||||||
seq2  ATGCCTGACACATTC-ATG-AGCC-AGTTCTTGACC-TCAGTATTGCTAG  1093

seq1  TGTTCTGCAGTGTCTGG  1115
      ||||||||| |||||||
seq2  TGTTCTGCAATGTCTGG  1110