BAC Information

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BAC

Clone NameB6Ng01-211H18
Chromosome14 (Build37)
Map Location 22,877,509 - 23,024,861
singlet/doubletdoublet
Overlap gene1700112E06Rik
Upstream geneAdk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075
Downstream geneEG435392, LOC665068
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211H18.bB6Ng01-211H18.g
ACCGA029541GA029542
length1,038987
definitionB6Ng01-211H18.b B6Ng01-211H18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,877,509 - 22,878,544)(23,023,871 - 23,024,861)
sequence
gaattcttttatatctagcctagcacctggcaagcagtcttgctataata
acaacagcagcaaacaacaataacaacaacagcagcagcaacactaaaaa
caactctcttgaaaccccttaaatatcttctgggtttatcagaacacttt
accatcccctggccatagctttcaattttcttttgtgggtcttatttcct
tctttctgtgttttctatgagatgtttctccctgagaaccatctgggaag
cctccttggaggttattataggtgtagtgtgactttggggggacagttag
agctattggtgggatccagcactttggagacagcaagacccaggcagatg
caatggagtagcagaggaagccagagtaggtctcttagcttcaagctttg
cctcccagtgttaaggggatttttctgagaggtcactggatcaacaagtc
ctccccttagtcaagtgaagagtctttttttccctaaggaaacccttaag
aacctctgaagtccattgtttcagataattcatggtttgctatccaggct
cctttaaagtacaaagagcccaaaatacaaacctatctcctcacaataga
atctactcttgttatggaaatcctagggattttacattataatactcacc
tatcaggcatggagagaaatgaaacttctctctgtcattgcacttgaggt
gtccctgctgtctgaaagtgagcccaaagcaggaggtgtcagccaatccc
ttgcctagtaaacgatgaaccactgcacacaatggcttactaactcctcc
ctctaaggcagtgcttttaaatgtttttatcctgaaagaaggcgtagtgt
tgaaagtgattttttggttatgtttttctgaggtggtctaagaccgcgtt
taaggaagagccccccccccccccctcccaatacagttgacttctgctga
acttgggtggagcattggaacattcccacactttcccagaaatcttctgt
tctggcccacccacagtggatcctcaggagttttgtgt

gaattctggaaagcaccgtatggggaaaggacagcgactagtccccagct
aagtttatctgccctgacagctcttgccttgacctggcagaactctagtg
tctacatggtgaacacaacgataactacagtgtcgacacaaccccgtcca
gtctccaaaggtcaggaggattgagcattttgcttcagtgcctccactaa
tccagagacacgccaatctgcttactgctactccacatcaggaggtttgg
attttccttatcgagggatgtcgggttcgctttgtcagaactgggtgatt
attaacacaaggctgagtgcccatggctgcaatgaagttttacaaattat
ctgggccttgcatgcctgggaaaagggatgagactaacaagatggtggta
actattgttagacaatgttctactccaagaacataaaagccacatggtgg
agcattgaggaattaaattcatggcctggaaagcaagccaagattaaaaa
atgtcatgttgatacagtaggtgctcttgagagtgagggggggaaactgt
cagcaactggattgattacattttcatagcatctcagtgagatggaggtg
gggaagtgtcgagggtattatgccctttgatgctgggagggagaggggca
cacgccatcgctttcatcaaaatttctatgtaagagaaaatccaccatca
ggaagctcaaaaaacttcatcctagaaacctataatgactctccccatgg
aaggtttggtagaataagttgcttcctttagcatctatagagctgtataa
agttctgtacacagcagcaaggctctttattgacagacaacttaggaaga
cgcagagactgaggactcaatgggtctcctagagttctacacattaagga
gcttattttcagaaccatgggggcttccaatcacctaactcccaactgcc
tttcagaagttgaactggagaatccccagtaggagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22877509_22878544
seq2: B6Ng01-211H18.b_47_1084

seq1  GAATTCTTTTATATCTAGCCTAGCACCTGGCAAGCAGTCTTGCTATAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATATCTAGCCTAGCACCTGGCAAGCAGTCTTGCTATAATA  50

seq1  ACAACAGCAGCAAACAACAATAACAACAACAGCAGCAGCAACACTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGCAGCAAACAACAATAACAACAACAGCAGCAGCAACACTAAAAA  100

seq1  CAACTCTCTTGAAACCCCTTAAATATCTTCTGGGTTTATCAGAACACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCTTGAAACCCCTTAAATATCTTCTGGGTTTATCAGAACACTTT  150

seq1  ACCATCCCCTGGCCATAGCTTTCAATTTTCTTTTGTGGGTCTTATTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCCCTGGCCATAGCTTTCAATTTTCTTTTGTGGGTCTTATTTCCT  200

seq1  TCTTTCTGTGTTTTCTATGAGATGTTTCTCCCTGAGAACCATCTGGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGTGTTTTCTATGAGATGTTTCTCCCTGAGAACCATCTGGGAAG  250

seq1  CCTCCTTGGAGGTTATTATAGGTGTAGTGTGACTTTGGGGGGACAGTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTGGAGGTTATTATAGGTGTAGTGTGACTTTGGGGGGACAGTTAG  300

seq1  AGCTATTGGTGGGATCCAGCACTTTGGAGACAGCAAGACCCAGGCAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTGGTGGGATCCAGCACTTTGGAGACAGCAAGACCCAGGCAGATG  350

seq1  CAATGGAGTAGCAGAGGAAGCCAGAGTAGGTCTCTTAGCTTCAAGCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAGTAGCAGAGGAAGCCAGAGTAGGTCTCTTAGCTTCAAGCTTTG  400

seq1  CCTCCCAGTGTTAAGGGGATTTTTCTGAGAGGTCACTGGATCAACAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAGTGTTAAGGGGATTTTTCTGAGAGGTCACTGGATCAACAAGTC  450

seq1  CTCCCCTTAGTCAAGTGAAGAGTCTTTTTTTCCCTAAGGAAACCCTTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTTAGTCAAGTGAAGAGTCTTTTTTTCCCTAAGGAAACCCTTAAG  500

seq1  AACCTCTGAAGTCCATTGTTTCAGATAATTCATGGTTTGCTATCCAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTGAAGTCCATTGTTTCAGATAATTCATGGTTTGCTATCCAGGCT  550

seq1  CCTTTAAAGTACAAAGAGCCCAAAATACAAACCTATCTCCTCACAATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAGTACAAAGAGCCCAAAATACAAACCTATCTCCTCACAATAGA  600

seq1  ATCTACTCTTGTTATGGAAATCCTAGGGATTTTACATTATAATACTCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTCTTGTTATGGAAATCCTAGGGATTTTACATTATAATACTCACC  650

seq1  TATCAGGCATGGAGAGAAATGAAACTTCTCTCTGTCATTGCACTTGAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGCATGGAGAGAAATGAAACTTCTCTCTGTCATTGCACTTGAGGT  700

seq1  GTCCCTGCTGTCTGAAAGTGAGCCCAAAGCAGGAGGTGTCAGCCAATCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGCTGTCTGAAAGTGAGCCCAAAGCAGGAGGTGTCAGCCAATCCC  750

seq1  TTGCCTAGTAAACGATGAACCACTGCACACAATGGCTTACTAACTCCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAGTAAACGATGAACCACTGCACACAATGGCTTACTAACTCCTCC  800

seq1  CTCTAAGGCAGTGCTTTTAAATGTTTTTATCCTGAAGGAAGGCGTAGGTG  850
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  CTCTAAGGCAGTGCTTTTAAATGTTTTTATCCTGAAAGAAGGCGTA-GTG  849

seq1  TTGAAAGTGA-TTTTTGGTTATGTTTTTCTGAGGTGGTCTAAGACCGCGT  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGTGATTTTTTGGTTATGTTTTTCTGAGGTGGTCTAAGACCGCGT  899

seq1  TTAAGGAAGAG-CCCCCCCCCCCCCCTCCCAATACAGTTGACTTCTGCTT  948
      ||||||||||| |||||||||||||||||||||||||||||||||||| |
seq2  TTAAGGAAGAGCCCCCCCCCCCCCCCTCCCAATACAGTTGACTTCTGC-T  948

seq1  GAACTTGGGTGGAAGCATTTGGACATTCCCACACTTCCCCAGAAATC-TC  997
      |||||||||||| |||||| | |||||||||||||| |||||||||| ||
seq2  GAACTTGGGTGG-AGCATTGGAACATTCCCACACTTTCCCAGAAATCTTC  997

seq1  TGTTCTGGCCCA-CCACAGTGGAT-CTCAGGAGTTTTGTGT  1036
      |||||||||||| ||||||||||| ||||||||||||||||
seq2  TGTTCTGGCCCACCCACAGTGGATCCTCAGGAGTTTTGTGT  1038


seq1: chr14_23023871_23024861
seq2: B6Ng01-211H18.g_70_1056 (reverse)

seq1  TTCTCCTACTTGGGGATTTCTTCCAGTTTCAACCTTCCTGAAAGGCAGTT  50
      ||||||||| ||||||||   ||||| ||||||  | |||||||||||||
seq2  TTCTCCTAC-TGGGGATT--CTCCAG-TTCAAC--TTCTGAAAGGCAGTT  44

seq1  GGAAGTTAGTTGATGGGAAGCCCCCATGGTTTCTTGAAATAAGCTCCTTA  100
      || |||||| |||| |||||||||||||| ||||  ||||||||||||||
seq2  GGGAGTTAGGTGATTGGAAGCCCCCATGG-TTCTGAAAATAAGCTCCTTA  93

seq1  TTGTGT-GAACTCTAGGAGAACCATTGAGTCCTCAGTCTCTGCGTCTTCC  149
       ||||| ||||||||||||| |||||||||||||||||||||||||||||
seq2  ATGTGTAGAACTCTAGGAGACCCATTGAGTCCTCAGTCTCTGCGTCTTCC  143

seq1  TAAGTTGTCTGTCAATAAAGAGCCTTGCTGCTGTGTACAGAACTTTATAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGTCTGTCAATAAAGAGCCTTGCTGCTGTGTACAGAACTTTATAC  193

seq1  AGCTCTAATAGATGCTAA--GGAGCAACTTATTCTACCAAACCTTCCATG  247
      |||||| |||||||||||  | ||||||||||||||||||||||||||||
seq2  AGCTCT-ATAGATGCTAAAGGAAGCAACTTATTCTACCAAACCTTCCATG  242

seq1  GGGAGAGTCATTATAGGTTTCTAGGATGAAGTTTTTTGAGCTTCCTGATG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGTCATTATAGGTTTCTAGGATGAAGTTTTTTGAGCTTCCTGATG  292

seq1  GTGGATTTTCTCTTACATAG-AATTTTGATGAAAGCGATGGCGTGTGCCC  346
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTGGATTTTCTCTTACATAGAAATTTTGATGAAAGCGATGGCGTGTGCCC  342

seq1  CTCTCCCTCCCAGCATCAAAGGGCATAATACCCTCGACACTTCCCCACCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCTCCCAGCATCAAAGGGCATAATACCCTCGACACTTCCCCACCT  392

seq1  CCATCTCACTGAGATGCTATGAAAATGTAATCAATCCAGTTGCTGACAGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCACTGAGATGCTATGAAAATGTAATCAATCCAGTTGCTGACAGT  442

seq1  TTCCCCCCCTCACTCTCAAGAGCACCTACTGTATCAACATGACATTTTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCCCTCACTCTCAAGAGCACCTACTGTATCAACATGACATTTTTT  492

seq1  AATCTTGGCTTGCTTTCCAGGCCATGAATTTAATTCCTCAATGCTCCACC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGGCTTGCTTTCCAGGCCATGAATTTAATTCCTCAATGCTCCACC  542

seq1  ATGTGGCTTTTATGTTCTTGGAGTAGAACATTGTCTAACAATAGTTACCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCTTTTATGTTCTTGGAGTAGAACATTGTCTAACAATAGTTACCA  592

seq1  CCATCTTGTTAGTCTCATCCCTTTTCCCAGGCATGCAAGGCCCAGATAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTGTTAGTCTCATCCCTTTTCCCAGGCATGCAAGGCCCAGATAAT  642

seq1  TTGTAAAACTTCATTGCAGCCATGGGCACTCAGCCTTGTGTTAATAATCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAACTTCATTGCAGCCATGGGCACTCAGCCTTGTGTTAATAATCA  692

seq1  CCCAGTTCTGACAAAGCGAACCCGACATCCCTCGATAAGGAAAATCCAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTCTGACAAAGCGAACCCGACATCCCTCGATAAGGAAAATCCAAA  742

seq1  CCTCCTGATGTGGAGTAGCAGTAAGCAGATTGGCGTGTCTCTGGATTAGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGATGTGGAGTAGCAGTAAGCAGATTGGCGTGTCTCTGGATTAGT  792

seq1  GGAGGCACTGAAGCAAAATGCTCAATCCTCCTGACCTTTGGAGACTGGAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCACTGAAGCAAAATGCTCAATCCTCCTGACCTTTGGAGACTGGAC  842

seq1  GGGGTTGTGTCGACACTGTAGTTATCGTTGTGTTCACCATGTAGACACTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTGTGTCGACACTGTAGTTATCGTTGTGTTCACCATGTAGACACTA  892

seq1  GAGTTCTGCCAGGTCAAGGCAAGAGCTGTCAGGGCAGATAAACTTAGCTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTGCCAGGTCAAGGCAAGAGCTGTCAGGGCAGATAAACTTAGCTG  942

seq1  GGGACTAGTCGCTGTCCTTTCCCCATACGGTGCTTTCCAGAATTC  991
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTAGTCGCTGTCCTTTCCCCATACGGTGCTTTCCAGAATTC  987


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