BAC Information

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BAC

Clone NameB6Ng01-211N16
Chromosome14 (Build37)
Map Location 51,437,114 - 51,569,223
singlet/doubletdoublet
Overlap geneParp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp
Upstream geneLOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1
Downstream geneLOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211N16.bB6Ng01-211N16.g
ACCGA029802GA029803
length1,1471,128
definitionB6Ng01-211N16.b B6Ng01-211N16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,437,114 - 51,438,247)(51,568,087 - 51,569,223)
sequence
gaattctacaccaggatccctcatgactttgggtaaggttgtgctgtctc
tttatcctgctcttctactcaccttttatgccctaagcagctgcagaggc
tatggtcctcttaaacttgtatttgtcaccttaaataaaattggatccaa
tgtgatttgtagctagcttagaataagggacggcagcactcaggaggcag
gagaggctgcctcatgagtttgaggccagctttaactctatctcaaggaa
agttttaaaataaaagaaatatgggacataatttcccaactttttttttt
tttttttttttggtttttcgagacagggtttctctgtatagtcctggctg
acctggaactcactttgtagaccaggctggccttgaactcagaaatccac
ctgcctctgcctcccgagtgctgggattaaaggcatacaccaccacgccc
agccaaacttattttttttttaagatttatttatttattatatgtaagta
ccctgtagctatcttcagacactccagatgagggcgtcaaatctcattgc
agatggttgtgaaccaccatgtggtcattggaatttgaactcaggacctt
cggaagagcagtcagtgctcttacccactgatccatctctccagccccaa
cttattataaccatattcttgaccaagtgaaagttaccaactcaagagag
aatggacccctggccccacaaaataaaataaaataaaaccttaaaatgca
aaaacatgaaaagtctatatctagccactgtgtgaaacaccttgcaaacc
ccgtcccttctgttctttaaggggactattagttacacaaataccacttt
ttctgaatctaaatgattggtattaaatgaagaaaacacattttctgccc
tttatttgtgtgtgtatatgtgtgtggtcctggggatttgaacctaaggc
cttgtgcattttaacttgagcacttttcccacaagagcttgtagcctcac
ctcaatccatttgtcaatactggtttttcaattgtttcatttaaaatagc
tcttgaatgctcaaagaccttacctctttctagattgtattcagactttc
cttattgatgtcatgttagctttttaaaaaggattatttatcctttt
gaattccaggacagccagggctacacagagaaaccctgtctcggaaaaaa
ccaaaaaaaaaaaaaaagcaatagaacaaagtagacatagctaaacttca
agttaacttgcttctcacttagtgcagggctctgctccctgcgggacgga
gtggcagatggcccacatcgctactgtctgccttctcccttctctctgaa
cagggttacccttccttccctcactcccactcctccctgctctgctcttc
cattcttaccccaaagggcttttaaatatttactaaaagtttcaactccc
ttaggaaaggtagatagaaaggaagatatgtaagaagaaataatcataat
aataataccaaagtaagtaagttatttaaaataaagagaaatgaaaaagc
ttgctcttgtcctttctaaatctgagtctgagttttcatgcttgcggtca
cagcgctacaatgatgacagagctcaacgttacatttccaaaggccacta
tgaaccaagtgttttcctgtattaatccctgtgtgcgcccataaccacag
tggccacagtgcttattgttgctatgtatgtctaggctgcacatagaggt
ggagatgaaggaagacagggaggatgacctggaacaggttgtctttctcc
tagggctacaggttctgcttcttctactgaaggtgagtgtgagtgcgtgc
atgtgtgagtgcgtgtgcgtgtgcgtgctatagcgtgaagacaactagtg
tgaatcagttcttccctttcagttcatgggtatcagagagtgaacatgtt
tgttcagcacctttcccaagcctccccaccctaacacacacactaataag
gatttctttctgaagcctttctgattctgtgggtgtctctttccctctta
catttatctttggtcaaaaattaggacaatggggctggagagatgcctca
gcgggttaagagcactgactgctcttccaaaggtcctgagttcaaatcca
agcaacacatgatggtttcacacatctgtaatgagatctgatgccctctt
cctgtgtgttctgaagacgctacgtgacttaataatataccttaatctga
aataattataaggtaggacaagaataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_51437114_51438247
seq2: B6Ng01-211N16.b_47_1193

seq1  GAATTCTACACCAGGATCCCTCATGACTTTGGGTAAGGTTGTGCTGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACACCAGGATCCCTCATGACTTTGGGTAAGGTTGTGCTGTCTC  50

seq1  TTTATCCTGCTCTTCTACTCACCTTTTATGCCCTAAGCAGCTGCAGAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCTGCTCTTCTACTCACCTTTTATGCCCTAAGCAGCTGCAGAGGC  100

seq1  TATGGTCCTCTTAAACTTGTATTTGTCACCTTAAATAAAATTGGATCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCCTCTTAAACTTGTATTTGTCACCTTAAATAAAATTGGATCCAA  150

seq1  TGTGATTTGTAGCTAGCTTAGAATAAGGGACGGCAGCACTCAGGAGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTTGTAGCTAGCTTAGAATAAGGGACGGCAGCACTCAGGAGGCAG  200

seq1  GAGAGGCTGCCTCATGAGTTTGAGGCCAGCTTTAACTCTATCTCAAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCTGCCTCATGAGTTTGAGGCCAGCTTTAACTCTATCTCAAGGAA  250

seq1  AGTTTTAAAATAAAAGAAATATGGGACATAATTTCCCAACTTTTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAAATAAAAGAAATATGGGACATAATTTCCCAACTTTTTTTTTT  300

seq1  TTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTATAGTCCTGGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTATAGTCCTGGCTG  350

seq1  ACCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCAC  400

seq1  CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCATACACCACCACGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCATACACCACCACGCCC  450

seq1  AGCCAAACTTATTTTTTTTTTAAGATTTATTTATTTATTATATGTAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAACTTATTTTTTTTTTAAGATTTATTTATTTATTATATGTAAGTA  500

seq1  CCCTGTAGCTATCTTCAGACACTCCAGATGAGGGCGTCAAATCTCATTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTAGCTATCTTCAGACACTCCAGATGAGGGCGTCAAATCTCATTGC  550

seq1  AGATGGTTGTGAACCACCATGTGGTCATTGGAATTTGAACTCAGGACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGTTGTGAACCACCATGTGGTCATTGGAATTTGAACTCAGGACCTT  600

seq1  CGGAAGAGCAGTCAGTGCTCTTACCCACTGATCCATCTCTCCAGCCCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGAGCAGTCAGTGCTCTTACCCACTGATCCATCTCTCCAGCCCCAA  650

seq1  CTTATTATAACCATATTCTTGACCAAGTGAAAGTTACCAACTCAAGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTATAACCATATTCTTGACCAAGTGAAAGTTACCAACTCAAGAGAG  700

seq1  AATGGACCCCTGGCCCCACAAAATAAAATAAAATAAAACCTTAAAATGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACCCCTGGCCCCACAAAATAAAATAAAATAAAACCTTAAAATGCA  750

seq1  AAAACATGAAAAGTCTATATCTAGCCACTGTGTGAAACACCTTGCAAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGAAAAGTCTATATCTAGCCACTGTGTGAAACACCTTGCAAACC  800

seq1  CCGTCCCTTCTGTTCTTTAAGGGGACTA-TAGTTACACAAATACCAC-TT  848
      |||||||||||||||||||||||||||| |||||||||||||||||| ||
seq2  CCGTCCCTTCTGTTCTTTAAGGGGACTATTAGTTACACAAATACCACTTT  850

seq1  TTCTGAATCTAAATGATTGGTATTAAATGAAGAAAACACA-TTTCTGCCC  897
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTCTGAATCTAAATGATTGGTATTAAATGAAGAAAACACATTTTCTGCCC  900

seq1  TTTATTTGTGTGTGTATATGTGTGTGGTCCTGGGGA-TTGAACCT-AGGC  945
      |||||||||||||||||||||||||||||||||||| |||||||| ||||
seq2  TTTATTTGTGTGTGTATATGTGTGTGGTCCTGGGGATTTGAACCTAAGGC  950

seq1  CTTGTGCATGTT-ACCTGAGCAC-TTTCCCAC-AGAGC-TGTAGCCTCA-  990
      ||||||||| || || ||||||| |||||||| ||||| |||||||||| 
seq2  CTTGTGCATTTTAACTTGAGCACTTTTCCCACAAGAGCTTGTAGCCTCAC  1000

seq1  CTCAATCCATTTGTC-ATACTGGTTTT--CATTGTTTCCATTTAAAATAG  1037
      ||||||||||||||| |||||||||||   ||||||| ||||||||||||
seq2  CTCAATCCATTTGTCAATACTGGTTTTTCAATTGTTT-CATTTAAAATAG  1049

seq1  CTC-TGAATGCTCAAAGGACTTACCTC-TTCTAGATTGTATTCAGAC-TT  1084
      ||| |||||||||||||  |||||||| ||||||||||||||||||| ||
seq2  CTCTTGAATGCTCAAAGACCTTACCTCTTTCTAGATTGTATTCAGACTTT  1099

seq1  CCTTATTGATGTCAATGTAGCTTTTTAAAAAAAGATTTATTTATCTTTTT  1134
      ||||||||||||||   |||||||||  ||||||  ||||||||| ||||
seq2  CCTTATTGATGTCATGTTAGCTTTTT--AAAAAGGATTATTTATCCTTTT  1147

seq1: chr14_51568087_51569223
seq2: B6Ng01-211N16.g_66_1193 (reverse)

seq1  TTTATTCTTGTCCTAACTTATTTATTTATTTTTAAAGATTTAGTTATTAT  50
      ||||||||||||||| ||||  || ||||||    ||||| || || |||
seq2  TTTATTCTTGTCCTACCTTA--TAATTATTT---CAGATTAAGGTA-TAT  44

seq1  TATATTAGTTCACTGTAGCTGTCTTCAG-ACACACCAGAAGAGGGCATCA  99
        |||||  |||| ||||| |||||||| ||||||  |||||||||||||
seq2  --TATTAAGTCAC-GTAGC-GTCTTCAGAACACACAGGAAGAGGGCATCA  90

seq1  GATCTCATTACAGATGGTTGTG-AACCATCATGTGGTTGCTGGGATTTGA  148
      ||||||||||||||||  |||| ||||||||||| |||||| ||||||||
seq2  GATCTCATTACAGATG--TGTGAAACCATCATGT-GTTGCTTGGATTTGA  137

seq1  ACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTAA-CCGCTGAGCCATC  197
      |||||||||||||||||||||||||||||||||||| |||||||| ||||
seq2  ACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCCGCTGAGGCATC  187

seq1  TCTCCAGCCCCATTGTCCTAATTTTTGACCAAAGATAAATGTAAGAGGGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGCCCCATTGTCCTAATTTTTGACCAAAGATAAATGTAAGAGGGA  237

seq1  AAGAGACA-CCACAGAATCAGAAAGGCTTCAGAAAGAAATCCTTATTAGT  296
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACACCCACAGAATCAGAAAGGCTTCAGAAAGAAATCCTTATTAGT  287

seq1  GTGTGTGTTAGGGTGGGGAGGCTTGGGAAAGGTGCTGAACAAACATGTTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTTAGGGTGGGGAGGCTTGGGAAAGGTGCTGAACAAACATGTTC  337

seq1  ACTCTCTGATACCCATGAACTGAAAGGGAAGAACTGATTCACACTAGTTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTGATACCCATGAACTGAAAGGGAAGAACTGATTCACACTAGTTG  387

seq1  TCTTCACGCTATAGCACGCACACGCACACGCACTCACACATGCACGCACT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACGCTATAGCACGCACACGCACACGCACTCACACATGCACGCACT  437

seq1  CACACTCACCTTCAGTAGAAGAAGCAGAACCTGTAGCCCTAGGAGAAAGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCACCTTCAGTAGAAGAAGCAGAACCTGTAGCCCTAGGAGAAAGA  487

seq1  CAACCTGTTCCAGGTCATCCTCCCTGTCTTCCTTCATCTCCACCTCTATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGTTCCAGGTCATCCTCCCTGTCTTCCTTCATCTCCACCTCTATG  537

seq1  TGCAGCCTAGACATACATAGCAACAATAAGCACTGTGGCCACTGTGGTTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCTAGACATACATAGCAACAATAAGCACTGTGGCCACTGTGGTTA  587

seq1  TGGGCGCACACAGGGATTAATACAGGAAAACACTTGGTTCATAGTGGCCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGCACACAGGGATTAATACAGGAAAACACTTGGTTCATAGTGGCCT  637

seq1  TTGGAAATGTAACGTTGAGCTCTGTCATCATTGTAGCGCTGTGACCGCAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAATGTAACGTTGAGCTCTGTCATCATTGTAGCGCTGTGACCGCAA  687

seq1  GCATGAAAACTCAGACTCAGATTTAGAAAGGACAAGAGCAAGCTTTTTCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAAACTCAGACTCAGATTTAGAAAGGACAAGAGCAAGCTTTTTCA  737

seq1  TTTCTCTTTATTTTAAATAACTTACTTACTTTGGTATTATTATTATGATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTTATTTTAAATAACTTACTTACTTTGGTATTATTATTATGATT  787

seq1  ATTTCTTCTTACATATCTTCCTTTCTATCTACCTTTCCTAAGGGAGTTGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCTTACATATCTTCCTTTCTATCTACCTTTCCTAAGGGAGTTGA  837

seq1  AACTTTTAGTAAATATTTAAAAGCCCTTTGGGGTAAGAATGGAAGAGCAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTAGTAAATATTTAAAAGCCCTTTGGGGTAAGAATGGAAGAGCAG  887

seq1  AGCAGGGAGGAGTGGGAGTGAGGGAAGGAAGGGTAACCCTGTTCAGAGAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGAGGAGTGGGAGTGAGGGAAGGAAGGGTAACCCTGTTCAGAGAG  937

seq1  AAGGGAGAAGGCAGACAGTAGCGATGTGGGCCATCTGCCACTCCGTCCCG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGAAGGCAGACAGTAGCGATGTGGGCCATCTGCCACTCCGTCCCG  987

seq1  CAGGGAGCAGAGCCCTGCACTAAGTGAGAAGCAAGTTAACTTGAAGTTTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGCAGAGCCCTGCACTAAGTGAGAAGCAAGTTAACTTGAAGTTTA  1037

seq1  GCTATGTCTACTTTGTTCTATTGCTTTTTTTTTTTTTTTGGTTTTTTCCG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGTCTACTTTGTTCTATTGCTTTTTTTTTTTTTTTGGTTTTTTCCG  1087

seq1  AGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAATTC  1128