BAC Information

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BAC

Clone NameB6Ng01-211N24
Chromosome14 (Build37)
Map Location 85,957,499 - 86,101,845
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC629794, LOC668603
Downstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211N24.bB6Ng01-211N24.g
ACCGA029818GA029819
length8831,067
definitionB6Ng01-211N24.b B6Ng01-211N24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,100,963 - 86,101,845)(85,957,499 - 85,958,572)
sequence
gaattcatcatatattattaatttaatgttcccttaatactacctgtatt
atctattcttgtttttctatttagattgtatcaagttttagtatttttct
tttttaatgttataaatatggattgtccttcataaacatatatatttgat
catttttattttattacatttactgtaaccatttatatatatatatatta
tatttatactgtaactatttttttactgtaactattgttaaatgttcata
cttcaagaaacttatgggcggtggtggcacacgcctttaatcccagcact
cgggagggagaggaaggtgaatttctgagttcaaggccagcctggtctac
aaagtgagttccaggacagccagagctatacagagaaaccctgtctcaaa
aaacaaaaaacaaaaaccaaaacaaacaaacaaacaaaaaaaaaaacaaa
aagaaaagagagagagagaaacttaaaatcatttcctgtgatttaaattt
ctttatttcacatatttaactaacactagttagtatgaatatttgttaat
ttcagttattattaaaatacaaatacaattgatagaaagtcagaacacta
ggaaaggaattttcataaagcatttatttcttttattatttagagaggct
aactgagctttaaatactgtgcatttaaagcaaatgtcctgcccatacta
tgcccacaggccttacagcgaaattttgctttaagatgaaggactgagtt
aacatttgctttgcaaaccacatcttaaaaattttaaaagtgatgaacaa
aaatttaaagatatatttagaaaactacattttgctacattttgtcttct
gtgcattgtgtgtgtgtgtgtgtgtgtgggggg

gaattcatctaaaataactgggcaaataaataaaaacttatccataaaac
aaagtaactcttattaccagcaccatgctcagaaattaccaactttcatt
ttaatgacctacagatgcattacataaaagaacttcctcgtttcagaaaa
atggaagcagcataactaggcatttgggagttggctggggaagcattcaa
ttcttcaaaaacagaattgcacttcaggcattagcaggcagagatgagtt
gtgaattcaaagcttacctagtgtctttggttgaatggagggaaagttta
aatgaaggcaataggacattttttttctctctctgccaagcattgtgatt
ttatcacatatattatgctggtcacttagaaaacaaacaaaattgcattc
agtttagttctaaatggtggcttagaaataaaaaataacaccagatggat
aaaataaaattgaatttctagtatattgcaaacaagcttaaatactgtgt
tcagcttccatgtggagtatgatttgaagtgaaagagtgttttgtgacta
gaacactttccattcattcaatatcacagatgaattttaaagctataata
tatcaatgagagtttactcgatgcaggtaacttgaaggaattccccaata
ttaaagagccttcatattctttggtcaacattgtcttagggttattattg
ctgtggtgaaacatcatgacccaaagcaagatgggaagtaaagggtttat
tttgtttatacatgtatattcatcatatacttgcagatcatcatcatctt
aggaagttagggcagaaactcaaactatgcaggcacctggaggcagaagt
agacatagagcccatggaggagtattgcttactggagtgcctctaatgcc
tgcctgctaacaaaacccagcactaccagtccttgtgtgctctatccaga
acaggctggtctatccccaatcatcaccaattacaaaatgctctaaaggt
ttgcctgtcacacccatctttgaaagccatttctcattgaagttctgtct
atcacatgactagagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86100963_86101845
seq2: B6Ng01-211N24.b_46_928 (reverse)

seq1  CCCCCCACACACACACACACACACACAATGCACAGAAGACAAAATGTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACACACACACACACACACACAATGCACAGAAGACAAAATGTAGC  50

seq1  AAAATGTAGTTTTCTAAATATATCTTTAAATTTTTGTTCATCACTTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTAGTTTTCTAAATATATCTTTAAATTTTTGTTCATCACTTTTAA  100

seq1  AATTTTTAAGATGTGGTTTGCAAAGCAAATGTTAACTCAGTCCTTCATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTAAGATGTGGTTTGCAAAGCAAATGTTAACTCAGTCCTTCATCT  150

seq1  TAAAGCAAAATTTCGCTGTAAGGCCTGTGGGCATAGTATGGGCAGGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAAAATTTCGCTGTAAGGCCTGTGGGCATAGTATGGGCAGGACAT  200

seq1  TTGCTTTAAATGCACAGTATTTAAAGCTCAGTTAGCCTCTCTAAATAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTAAATGCACAGTATTTAAAGCTCAGTTAGCCTCTCTAAATAATA  250

seq1  AAAGAAATAAATGCTTTATGAAAATTCCTTTCCTAGTGTTCTGACTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATAAATGCTTTATGAAAATTCCTTTCCTAGTGTTCTGACTTTCT  300

seq1  ATCAATTGTATTTGTATTTTAATAATAACTGAAATTAACAAATATTCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTGTATTTGTATTTTAATAATAACTGAAATTAACAAATATTCATA  350

seq1  CTAACTAGTGTTAGTTAAATATGTGAAATAAAGAAATTTAAATCACAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAGTGTTAGTTAAATATGTGAAATAAAGAAATTTAAATCACAGGA  400

seq1  AATGATTTTAAGTTTCTCTCTCTCTCTTTTCTTTTTGTTTTTTTTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTTTAAGTTTCTCTCTCTCTCTTTTCTTTTTGTTTTTTTTTTTGT  450

seq1  TTGTTTGTTTGTTTTGGTTTTTGTTTTTTGTTTTTTGAGACAGGGTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTTGGTTTTTGTTTTTTGTTTTTTGAGACAGGGTTTCT  500

seq1  CTGTATAGCTCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATAGCTCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCT  550

seq1  TGAACTCAGAAATTCACCTTCCTCTCCCTCCCGAGTGCTGGGATTAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAGAAATTCACCTTCCTCTCCCTCCCGAGTGCTGGGATTAAAGG  600

seq1  CGTGTGCCACCACCGCCCATAAGTTTCTTGAAGTATGAACATTTAACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGCCACCACCGCCCATAAGTTTCTTGAAGTATGAACATTTAACAAT  650

seq1  AGTTACAGTAAAAAAATAGTTACAGTATAAATATAATATATATATATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAGTAAAAAAATAGTTACAGTATAAATATAATATATATATATATA  700

seq1  AATGGTTACAGTAAATGTAATAAAATAAAAATGATCAAATATATATGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTACAGTAAATGTAATAAAATAAAAATGATCAAATATATATGTTT  750

seq1  ATGAAGGACAATCCATATTTATAACATTAAAAAAGAAAAATACTAAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGACAATCCATATTTATAACATTAAAAAAGAAAAATACTAAAACT  800

seq1  TGATACAATCTAAATAGAAAAACAAGAATAGATAATACAGGTAGTATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAATCTAAATAGAAAAACAAGAATAGATAATACAGGTAGTATTAA  850

seq1  GGGAACATTAAATTAATAATATATGATGAATTC  883
      |||||||||||||||||||||||||||||||||
seq2  GGGAACATTAAATTAATAATATATGATGAATTC  883


seq1: chr14_85957499_85958572
seq2: B6Ng01-211N24.g_64_1130

seq1  GAATTCATCTAAAATAACTGGGCAAATAAATAAAAACTTATCCATAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTAAAATAACTGGGCAAATAAATAAAAACTTATCCATAAAAC  50

seq1  AAAGTAACTCTTATTACCAGCACCATGCTCAGAAATTACCAACTTTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAACTCTTATTACCAGCACCATGCTCAGAAATTACCAACTTTCATT  100

seq1  TTAATGACCTACAGATGCATTACATAAAAGAACTTCCTCGTTTCAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGACCTACAGATGCATTACATAAAAGAACTTCCTCGTTTCAGAAAA  150

seq1  ATGGAAGCAGCATAACTAGGCATTTGGGAGTTGGCTGGGGAAGCATTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGCAGCATAACTAGGCATTTGGGAGTTGGCTGGGGAAGCATTCAA  200

seq1  TTCTTCAAAAACAGAATTGCACTTCAGGCATTAGCAGGCAGAGATGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAAAACAGAATTGCACTTCAGGCATTAGCAGGCAGAGATGAGTT  250

seq1  GTGAATTCAAAGCTTACCTAGTGTCTTTGGTTGAATGGAGGGAAAGTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTCAAAGCTTACCTAGTGTCTTTGGTTGAATGGAGGGAAAGTTTA  300

seq1  AATGAAGGCAATAGGACATTTTTTTTCTCTCTCTGCCAAGCATTGTGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGGCAATAGGACATTTTTTTTCTCTCTCTGCCAAGCATTGTGATT  350

seq1  TTATCACATATATTATGCTGGTCACTTAGAAAACAAACAAAATTGCATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCACATATATTATGCTGGTCACTTAGAAAACAAACAAAATTGCATTC  400

seq1  AGTTTAGTTCTAAATGGTGGCTTAGAAATAAAAAATAACACCAGATGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGTTCTAAATGGTGGCTTAGAAATAAAAAATAACACCAGATGGAT  450

seq1  AAAATAAAATTGAATTTCTAGTATATTGCAAACAAGCTTAAATACTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAATTGAATTTCTAGTATATTGCAAACAAGCTTAAATACTGTGT  500

seq1  TCAGCTTCCATGTGGAGTATGATTTGAAGTGAAAGAGTGTTTTGTGACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTCCATGTGGAGTATGATTTGAAGTGAAAGAGTGTTTTGTGACTA  550

seq1  GAACACTTTCCATTCATTCAATATCACAGATGAATTTTAAAGCTATAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTTTCCATTCATTCAATATCACAGATGAATTTTAAAGCTATAATA  600

seq1  TATCAATGAGAGTTTACTCGATGCAGGTAACTTGAAGGAATTCCCCAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATGAGAGTTTACTCGATGCAGGTAACTTGAAGGAATTCCCCAATA  650

seq1  TTAAAGAGCCTTCATATTCTTTGGTCAACATTGTCTTAGGGTTATTATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGCCTTCATATTCTTTGGTCAACATTGTCTTAGGGTTATTATTG  700

seq1  CTGTGGTGAAACATCATGACCCAAAGCAAGATGGGAAGTAAAGGGTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTGAAACATCATGACCCAAAGCAAGATGGGAAGTAAAGGGTTTAT  750

seq1  TTTGTTTATACATGTATATTCATCATATACTTGCAGATCATCATCATCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTATACATGTATATTCATCATATACTTGCAGATCATCATCATCTT  800

seq1  AGGAAGTTAGGGCAGAAACTCAAACTATGCAGGCACCTGGAGGCAGAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTTAGGGCAGAAACTCAAACTATGCAGGCACCTGGAGGCAGAAGT  850

seq1  AGACATAGAGCCCATGGAGGAGTATTGCTTACTGGAGTGCCTCTAATGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATAGAGCCCATGGAGGAGTATTGCTTACTGGAGTGCCTCTAATGCC  900

seq1  TGCCTGCTAACAAAACCCAGCACTACCAGTCCTTGTGTGCTCTATCCAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCTAACAAAACCCAGCACTACCAGTCCTTGTGTGCTCTATCCAGA  950

seq1  ACAGGCTGGTCTATTCCCCATCAATCACCAATTAACAAAATGCTCTAAAG  1000
      |||||||||||||| ||| ||| |||||||||| ||||||||||||||||
seq2  ACAGGCTGGTCTATCCCCAATC-ATCACCAATT-ACAAAATGCTCTAAAG  998

seq1  GTTTGCCTGTTCACACCCAATCTTTTGAAAGCATTTTCTCAATTGAAGTT  1050
      ||||||||| |||||||| ||| |||||||||  |||||| |||||||||
seq2  GTTTGCCTG-TCACACCC-ATC-TTTGAAAGCCATTTCTC-ATTGAAGTT  1044

seq1  CTGTCCTATCACATGACTAGAGTT  1074
      |||| |||||||||||||||||||
seq2  CTGT-CTATCACATGACTAGAGTT  1067


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