BAC Information

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BAC

Clone NameB6Ng01-213I20
Chromosome14 (Build37)
Map Location 51,999,370 - 52,000,460
singlet/doubletsinglet
Overlap geneEG638695, Vmn2r-ps110
Upstream geneOlfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238
Downstream geneLOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213I20.bB6Ng01-213I20.g
ACCGA031041GA031042
length1,094836
definitionB6Ng01-213I20.b B6Ng01-213I20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgatacagtgaaagatttcagggaacactgagtgtagggttat
gtatttataaaatatccaacaacactgtggtttatgaatatatcttctct
aaatgtaataatctactttatatcaacatagaaccaaaaaatggtttagg
aaatcgttgctttttgaaaaaattacgaatgataaaatcaacaaagttaa
ataaacaaagaaatagatgcttggttttattttcccttaaatctttatgt
agattacgaaacaaaagtaatgttgtacagtgatgtccttcatatttcat
tctcagcagcagtgcaagtcttcttccaacacacttgaaaaccttgtcaa
tagaatttctaaagtagcactaacaaacctttcctttcgacgtcagatac
ggagcagtttgtgaattgtccaggagaccagtatgcaaacacagagcaga
acgaatgcattccaaaagccgtgatcattctaggctacggagaccccttg
gggatggatacttccttaatagcctccgtttctttgcattcacagctgtg
gtactttgggtctttgtgaagcaccatggcactcctcttgtgaaggccaa
taacagaatcctcagctacctattactcatgtcactcatgttctgttttc
tgtgctcctttttcttcgttggtcatcctaacagagcaacctgtatctta
cagcaaatcacatttggaattgtattcacggtggctgtttccacagttct
ggccaaaacaatcactgtgtttctggctttcaaatcacaggacctggaag
aaggttgaggaacttcctggtatcaggtgcacccaaccacattatcccca
tatgttccttattacaatgtattctgtgtgcaatctggctagcagtttct
cttccctttgttgatattgatgaacactctgagcatggccacaccatcat
tgtgttcaacaagggctcagctactgcactctactggtgtcctgggatac
ttggactgcctgggccttggcaagctgcactggtggactttcttagcaag
aatctgcccggacacattcatgcaggcaagttctggaccttcag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atagatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagcccttgactctagctgcatatgtatcaaaagaagctgga
aagaacccagatgcccctcaacagaggaatggatacagaaaatgtggtac
atctacacaatggagtactactcagctattaaaaagaatgaatttatgaa
attcctagccaaatggatggacctggagggcatcatcctgagtgaggtaa
cacattcacaaaggaactcacacaatatgtactcactgataagtggatat
tagcccaaaacctagtatacccaagatataagatacaatttcctaaacac
atgaaactcaagaaaaatgaagactgaagtgtggacactatgcccctcct
tagaagtgggaacaaaacacccttggaaggagttacagagacaaagtttg
gagctgagatgaaaggatggaccatgtagagactgccatatccagggatc
caccccataatcagcatccaaacgctgacaccattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_51999370_52000460
seq2: B6Ng01-213I20.b_40_1133

seq1  GAATTCATGATACAGTGAAAGATTTCAGGGAACACTGAGTGTAGGGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGATACAGTGAAAGATTTCAGGGAACACTGAGTGTAGGGTTAT  50

seq1  GTATTTATAAAATATCCAACAACACTGTGGTTTATGAATATATCTTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTATAAAATATCCAACAACACTGTGGTTTATGAATATATCTTCTCT  100

seq1  AAATGTAATAATCTACTTTATATCAACATAGAACCAAAAAATGGTTTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAATAATCTACTTTATATCAACATAGAACCAAAAAATGGTTTAGG  150

seq1  AAATCGTTGCTTTTTGAAAAAATTACGAATGATAAAATCAACAAAGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGTTGCTTTTTGAAAAAATTACGAATGATAAAATCAACAAAGTTAA  200

seq1  ATAAACAAAGAAATAGATGCTTGGTTTTATTTTCCCTTAAATCTTTATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAAAGAAATAGATGCTTGGTTTTATTTTCCCTTAAATCTTTATGT  250

seq1  AGATTACGAAACAAAAGTAATGTTGTACAGTGATGTCCTTCATATTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACGAAACAAAAGTAATGTTGTACAGTGATGTCCTTCATATTTCAT  300

seq1  TCTCAGCAGCAGTGCAAGTCTTCTTCCAACACACTTGAAAACCTTGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCAGCAGTGCAAGTCTTCTTCCAACACACTTGAAAACCTTGTCAA  350

seq1  TAGAATTTCTAAAGTAGCACTAACAAACCTTTCCTTTCGACGTCAGATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTTCTAAAGTAGCACTAACAAACCTTTCCTTTCGACGTCAGATAC  400

seq1  GGAGCAGTTTGTGAATTGTCCAGGAGACCAGTATGCAAACACAGAGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGTTTGTGAATTGTCCAGGAGACCAGTATGCAAACACAGAGCAGA  450

seq1  ACGAATGCATTCCAAAAGCCGTGATCATTCTAGGCTACGGAGACCCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATGCATTCCAAAAGCCGTGATCATTCTAGGCTACGGAGACCCCTTG  500

seq1  GGGATGGATACTTCCTTAATAGCCTCCGTTTCTTTGCATTCACAGCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGATACTTCCTTAATAGCCTCCGTTTCTTTGCATTCACAGCTGTG  550

seq1  GTACTTTGGGTCTTTGTGAAGCACCATGGCACTCCTCTTGTGAAGGCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTGGGTCTTTGTGAAGCACCATGGCACTCCTCTTGTGAAGGCCAA  600

seq1  TAACAGAATCCTCAGCTACCTATTACTCATGTCACTCATGTTCTGTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGAATCCTCAGCTACCTATTACTCATGTCACTCATGTTCTGTTTTC  650

seq1  TGTGCTCCTTTTTCTTCGTTGGTCATCCTAACAGAGCAACCTGTATCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCCTTTTTCTTCGTTGGTCATCCTAACAGAGCAACCTGTATCTTA  700

seq1  CAGCAAATCACATTTGGAATTGTATTCACGGTGGCTGTTTCCACAGTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAATCACATTTGGAATTGTATTCACGGTGGCTGTTTCCACAGTTCT  750

seq1  GGCCAAAACAATCACTGTGTTTCTGGCTTTCAAATCACAGGACCTGGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAAACAATCACTGTGTTTCTGGCTTTCAAATCACAGGACCTGGAAG  800

seq1  AAGGTTGAGGAACTTCCTGGTATCAGGTGCACCCAACCACATTATCCCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGAGGAACTTCCTGGTATCAGGTGCACCCAACCACATTATCCCCA  850

seq1  TATGTTCCTTATTACAATGTATTCTGTGTGCAATCTGGCTAGCAGTTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCCTTATTACAATGTATTCTGTGTGCAATCTGGCTAGCAGTTTCT  900

seq1  CTTCCCTTTGTTGATATTGATGAACACTCTGAGCATGGCCACACCATCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTTGTTGATATTGATGAACACTCTGAGCATGGCCACACCATCAT  950

seq1  TGTGTTCAACAAGGGCTCAGTTACTGCACTCTACT-GTGTCCTGGGATAC  999
      |||||||||||||||||||| |||||||||||||| ||||||||||||||
seq2  TGTGTTCAACAAGGGCTCAGCTACTGCACTCTACTGGTGTCCTGGGATAC  1000

seq1  TTGGACTGCCTGGCCCTTGG-AAGCTGCACT-GTGG-CTTTCTTGGCAAA  1046
      ||||||||||||| |||||| |||||||||| |||| ||||||| || ||
seq2  TTGGACTGCCTGGGCCTTGGCAAGCTGCACTGGTGGACTTTCTTAGC-AA  1049

seq1  GAATCTGCCC-GACACATTCAATGAAGCCAAGTTCTTGACCTTCAG  1091
      |||||||||| ||||||||| ||| || |||||||| |||||||||
seq2  GAATCTGCCCGGACACATTC-ATGCAGGCAAGTTCTGGACCTTCAG  1094