BAC Information

Click to search

BAC

Clone NameB6Ng01-214B24
Chromosome14 (Build37)
Map Location 67,470,597 - 67,631,574
singlet/doubletdoublet
Overlap geneDpysl2, EG432870, Pnma2, LOC672614, Bnip3l
Upstream geneCcdc25, Scara3, Clu, Gulo, Adam2, LOC100043675, Ephx2, Chrna2, Ptk2b, LOC100043676, Trim35, Stmn4, Adra1a, ENSMUSG00000057913, LOC668366
Downstream genePpp2r2a, Ebf2, EG628416, LOC100043046, LOC100043056, Cdca2, Kctd9, Gnrh1, Dock5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214B24.bB6Ng01-214B24.g
ACCGA031461GA031462
length1,1111,099
definitionB6Ng01-214B24.b B6Ng01-214B24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,630,461 - 67,631,574)(67,470,597 - 67,471,677)
sequence
gaattcttcaagcaggaagttaaactggcataaaaatatttagaaatagg
accagcaaccggtttgagtagtttcccaccagggggcagtagttacatct
tgaccagcctctgtgaactgtttgtggattgtatagacaggtatgccatt
aaaacccaaaccaggccaagtaaacagtgattttaaagtgtgcttgtatc
caggttaatgattggaagttaacataaaatggcccttcataacaccttgc
ttgtcacatagacaaccaaaaactttgaattctacaaagaatccttcaag
caggaagtttaactggcataaaaatatttagaaataggaccagcaaccgg
tttgagcgagttcccactaggggactgtttgagacccgtgatagacatcc
aacgcctgtttgaatgcaccaggctctctgagaaaggacttacttaccat
tcttcccttgcaaaggcagatctgataaaccttgttacaagaccaaagac
ttcacgcacacttgtgcagagttaacagcaaggtgtgtaaatacgattct
ctggacagttaaaaagcgcttaaggcgagagaatgttcactcaaacgtcc
ttaggcctgtttttctagaggaactgggttcatcctatgtaagcgtaatg
ccttcctatttccccctgattcccatgttgaggattttgttttgagataa
agggtagtcttttttttttttttctttcttttttttttttttggtttttc
gagacaggatttctctgtatagccctggctgtcctgcaactcattttgta
gaccaggctggcctcgaactcagaaatccacctgcctctgcctcccaagt
gctgagattaaagggtgtgtgccaccaccgcccagctcaaagggtagtct
tgaactgacgttcttgcttctctgtcttccaagtgtgtgctggtgggtga
ctttcagtattatctataaagaggatttcttgtctacatagccaccactt
gtgtggattttccatagccagttcctgggttttgattttggttttaattt
gcaagtagaaattattatcatccagtcctcagtgtaaaactataagtgta
aggcctacagc
gaattcatagcataagtcactattggggactgctgtccaaacagcactca
ggaatgcaggagaaatctaggtcatggaggcagggctactgtggagagac
caaaggcagtcggtagaccaccatggtggcaagcctctccccacgggtgt
agcctccctcttagtgggagatgtccaatagctgatcattttcgccctct
atattacagaaaagggaaaggcactttgaagtgatggttggttggaaatg
caggataaagcctgaatactagaatcttcctgctgctggcaagacagggg
actggacagaagcctgatgctgccggccaactcaaagtaagtaagggatg
tgctcagggtttctgtggcgttcacgcacattctaattgttaaaaagcaa
gcaaacaaacgaaaaaatcaaacccttttagctgagaaaacagcttattt
gattaagtgcttgccgtacaaatctgaagagctgagatcaatccccagag
taaatgcagaaaatttggacgtggtggtggtcaataaaatcccagcactg
cagatgtggagctctgtggacctctagtgctggctgcctcgcttccttgc
tgcgtgacctctctgactcctatctgcacaatgtcggagcttggatcgga
accttagctagactcacagtaatgaagcaagtccgtagtcatctctgggc
ttcctcccaatccttcagtcctagctgggtagtcagctcttgaccttcaa
ggtcaaagggaggacaggacaggaaatgagggcccagggtttgcaaattc
tcagagcacttaattaataatctctacttgcaaataaactttcttcccgg
gtaattgtatgtctatggagaaggtccagaaaagcattctggtgaggtca
ttggcagagctcggtcagaggacaaggggaaacaaaacaggagaagcacc
tttaatagtccacacatggctttctttgtttggtcagtctgggccttgca
ccttgcctcgatgttatcattaataggaaataagtttgaatgtcattcca
tcagacacgggacctaaatgttggtccttttagaagatggttccacgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_67630461_67631574
seq2: B6Ng01-214B24.b_45_1155 (reverse)

seq1  GCTGTAGGGCTGTACACTAATAGTTTTTACACTGA-GACTGGGATGATTA  49
      |||||||| || |||||| |||| ||||||||||| |||| |||||| ||
seq2  GCTGTAGGCCT-TACACTTATAG-TTTTACACTGAGGACT-GGATGA-TA  46

seq1  TTAATTTCTACTTGCAAAATAAAAACAAAAATCAAAA-CCAGGAACTGGC  98
       |||||||||||||| |||| ||||| |||||||||| ||||||||||||
seq2  ATAATTTCTACTTGC-AAATTAAAACCAAAATCAAAACCCAGGAACTGGC  95

seq1  TATGGAAAATCCACACAAGT-GTGGCTATGTAGACAAGAAAATCCTCTTT  147
      |||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  TATGGAAAATCCACACAAGTGGTGGCTATGTAGACAAG-AAATCCTCTTT  144

seq1  ATAGATAATACTTGAAAGTCACCCACCAGCACACACTTGGAAGACAGAGA  197
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAATAC-TGAAAGTCACCCACCAGCACACACTTGGAAGACAGAGA  193

seq1  AGCAAGAACGTCAGTTCAAGACTACCCTTTGAGCTGGGCGGTGGTGGCAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAACGTCAGTTCAAGACTACCCTTTGAGCTGGGCGGTGGTGGCAC  243

seq1  ACA-CCTTTAATCTCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAG  296
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTTTAATCTCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAG  293

seq1  TTCGAGGCCAGCCTGGTCTACAAAATGAGTTGCAGGACAGCCAGGGCTAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGGCCAGCCTGGTCTACAAAATGAGTTGCAGGACAGCCAGGGCTAT  343

seq1  ACAGAGAAATCCTGTCTCGAAAAACCAAAAAAAAAAAAAAGAAAGAAAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAATCCTGTCTCGAAAAACCAAAAAAAAAAAAAAGAAAGAAAAA  393

seq1  AAAAAAAAAGACTACCCTTTATCTCAAAACAAAATCCTCAACATGGGAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGACTACCCTTTATCTCAAAACAAAATCCTCAACATGGGAAT  443

seq1  CAGGGGGAAATAGGAAGGCATTACGCTTACATAGGATGAACCCAGTTCCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGGAAATAGGAAGGCATTACGCTTACATAGGATGAACCCAGTTCCT  493

seq1  CTAGAAAAACAGGCCTAAGGACGTTTGAGTGAACATTCTCTCGCCTTAAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAAACAGGCCTAAGGACGTTTGAGTGAACATTCTCTCGCCTTAAG  543

seq1  CGCTTTTTAACTGTCCAGAGAATCGTATTTACACACCTTGCTGTTAACTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTTTAACTGTCCAGAGAATCGTATTTACACACCTTGCTGTTAACTC  593

seq1  TGCACAAGTGTGCGTGAAGTCTTTGGTCTTGTAACAAGGTTTATCAGATC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAAGTGTGCGTGAAGTCTTTGGTCTTGTAACAAGGTTTATCAGATC  643

seq1  TGCCTTTGCAAGGGAAGAATGGTAAGTAAGTCCTTTCTCAGAGAGCCTGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTGCAAGGGAAGAATGGTAAGTAAGTCCTTTCTCAGAGAGCCTGG  693

seq1  TGCATTCAAACAGGCGTTGGATGTCTATCACGGGTCTCAAACAGTCCCCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCAAACAGGCGTTGGATGTCTATCACGGGTCTCAAACAGTCCCCT  743

seq1  AGTGGGAACTCGCTCAAACCGGTTGCTGGTCCTATTTCTAAATATTTTTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAACTCGCTCAAACCGGTTGCTGGTCCTATTTCTAAATATTTTTA  793

seq1  TGCCAGTTAAACTTCCTGCTTGAAGGATTCTTTGTAGAATTCAAAGTTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTTAAACTTCCTGCTTGAAGGATTCTTTGTAGAATTCAAAGTTTT  843

seq1  TGGTTGTCTATGTGACAAGCAAGGTGTTATGAAGGGCCATTTTATGTTAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTCTATGTGACAAGCAAGGTGTTATGAAGGGCCATTTTATGTTAA  893

seq1  CTTCCAATCATTAACCTGGATACAAGCACACTTTAAAATCACTGTTTACT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAATCATTAACCTGGATACAAGCACACTTTAAAATCACTGTTTACT  943

seq1  TGGCCTGGTTTGGGTTTTAATGGCATACCTGTCTATACAATCCACAAACA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGGTTTGGGTTTTAATGGCATACCTGTCTATACAATCCACAAACA  993

seq1  GTTCACAGAGGCTGGTCAAGATGTAACTACTGCCCCCTGGTGGGAAACTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACAGAGGCTGGTCAAGATGTAACTACTGCCCCCTGGTGGGAAACTA  1043

seq1  CTCAAACCGGTTGCTGGTCCTATTTCTAAATATTTTTATGCCAGTTTAAC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACCGGTTGCTGGTCCTATTTCTAAATATTTTTATGCCAGTTTAAC  1093

seq1  TTCCTGCTTGAAGAATTC  1114
      ||||||||||||||||||
seq2  TTCCTGCTTGAAGAATTC  1111

seq1: chr14_67470597_67471677
seq2: B6Ng01-214B24.g_66_1164

seq1  GAATTCATAGCATAAGTCACTATTGGGGACTGCTGTCCAAACAGCACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGCATAAGTCACTATTGGGGACTGCTGTCCAAACAGCACTCA  50

seq1  GGAATGCAGGAGAAATCTAGGTCATGGAGGCAGGGCTACTGTGGAGAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCAGGAGAAATCTAGGTCATGGAGGCAGGGCTACTGTGGAGAGAC  100

seq1  CAAAGGCAGTCGGTAGACCACCATGGTGGCAAGCCTCTCCCCACGGGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCAGTCGGTAGACCACCATGGTGGCAAGCCTCTCCCCACGGGTGT  150

seq1  AGCCTCCCTCTTAGTGGGAGATGTCCAATAGCTGATCATTTTCGCCCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCCTCTTAGTGGGAGATGTCCAATAGCTGATCATTTTCGCCCTCT  200

seq1  ATATTACAGAAAAGGGAAAGGCACTTTGAAGTGATGGTTGGTTGGAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACAGAAAAGGGAAAGGCACTTTGAAGTGATGGTTGGTTGGAAATG  250

seq1  CAGGATAAAGCCTGAATACTAGAATCTTCCTGCTGCTGGCAAGACAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATAAAGCCTGAATACTAGAATCTTCCTGCTGCTGGCAAGACAGGGG  300

seq1  ACTGGACAGAAGCCTGATGCTGCCGGCCAACTCAAAGTAAGTAAGGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACAGAAGCCTGATGCTGCCGGCCAACTCAAAGTAAGTAAGGGATG  350

seq1  TGCTCAGGGTTTCTGTGGCGTTCACGCACATTCTAATTGTTAAAAAGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGGGTTTCTGTGGCGTTCACGCACATTCTAATTGTTAAAAAGCAA  400

seq1  GCAAACAAACGAAAAAATCAAACCCTTTTAGCTGAGAAAACAGCTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACAAACGAAAAAATCAAACCCTTTTAGCTGAGAAAACAGCTTATTT  450

seq1  GATTAAGTGCTTGCCGTACAAATCTGAAGAGCTGAGATCAATCCCCAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGTGCTTGCCGTACAAATCTGAAGAGCTGAGATCAATCCCCAGAG  500

seq1  TAAATGCAGAAAATTTGGACGTGGTGGTGGTCAATAAAATCCCAGCACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCAGAAAATTTGGACGTGGTGGTGGTCAATAAAATCCCAGCACTG  550

seq1  CAGATGTGGAGCTCTGTGGACCTCTAGTGCTGGCTGCCTCGCTTCCTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGGAGCTCTGTGGACCTCTAGTGCTGGCTGCCTCGCTTCCTTGC  600

seq1  TGCGTGACCTCTCTGACTCCTATCTGCACAATGTCGGAGCTTGGATCGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGACCTCTCTGACTCCTATCTGCACAATGTCGGAGCTTGGATCGGA  650

seq1  ACCTTAGCTAGACTCACAGTAATGAAGCAAGTCCGTAGTCATCTCTGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAGCTAGACTCACAGTAATGAAGCAAGTCCGTAGTCATCTCTGGGC  700

seq1  TTCCTCCCAATCCTTCAGTCCTAGCTGGGTAGTCAGCTCTTGACCTTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCCAATCCTTCAGTCCTAGCTGGGTAGTCAGCTCTTGACCTTCAA  750

seq1  GGTCAAAGGGAGGACAGGACAGGAAATGAGGGCCCAGGGTTTGCAAATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAAGGGAGGACAGGACAGGAAATGAGGGCCCAGGGTTTGCAAATTC  800

seq1  TCAGAGCACTTAATTAATAATCTCTACTTGCAAATAAACTTTCTTCCCGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCACTTAATTAATAATCTCTACTTGCAAATAAACTTTCTTCCCGG  850

seq1  GT-ATTGTATGTCTATGGAGAAGGTCCAG-AAAGCA-TCT-GTGAGGTCA  896
      || |||||||||||||||||||||||||| |||||| ||| |||||||||
seq2  GTAATTGTATGTCTATGGAGAAGGTCCAGAAAAGCATTCTGGTGAGGTCA  900

seq1  TTGGCAGAGCTC-GTCAGAGGACAAGGG--AACAAAACAGGAG-AGCACC  942
      |||||||||||| |||||||||||||||  ||||||||||||| ||||||
seq2  TTGGCAGAGCTCGGTCAGAGGACAAGGGGAAACAAAACAGGAGAAGCACC  950

seq1  -TTAATAGTCCACACATGCCTTCCTTTGTTTGGGTCAGTCTGG--CCTGC  989
       ||||||||||||||||| ||| |||||||| |||||||||||  | |||
seq2  TTTAATAGTCCACACATGGCTTTCTTTGTTT-GGTCAGTCTGGGCCTTGC  999

seq1  ACCTTGCCCCGATGTTA-CATTAATAGGAAAT-AGGTTGAA-GTGCATCC  1036
      |||||||| |||||||| |||||||||||||| || ||||| ||   |||
seq2  ACCTTGCCTCGATGTTATCATTAATAGGAAATAAGTTTGAATGTCATTCC  1049

seq1  ATCAGACA--GGACCTTAAATGTTTGTCC--TTAG-AGAT-GTTCCACGG  1080
      ||||||||  ||||| |||||||| ||||  |||| |||| |||||||||
seq2  ATCAGACACGGGACC-TAAATGTTGGTCCTTTTAGAAGATGGTTCCACGG  1098

seq1  A  1081
      |
seq2  A  1099