BAC Information

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BAC

Clone NameB6Ng01-215C18
Chromosome14 (Build37)
Map Location 40,972,515 - 40,973,744
singlet/doubletsinglet
Overlap genenone
Upstream geneNrg3, LOC100040439
Downstream geneLOC218945, LOC100040470, LOC382876, Sh2d4b, Tspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079, Mbl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215C18.bB6Ng01-215C18.g
ACCGA032219GA032220
length1,235981
definitionB6Ng01-215C18.b B6Ng01-215C18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctacctagggtaaagaggacccaaaagtgttttaacatattca
tctgccatgatacacagttgtcataatagctatgtcagaaattgtctaga
ctacaattcaagttggcagaagactttggcagtcccttccaagtcctttt
ttttagggcatacaaaatgaataagttacaggttcatggagctttgaacc
acagtttagatggaaatgtgacagtcttgggtctctgaaaaaaatcacag
aggcacctgcctcccagcacacagagcacctctctagcaactactgttga
tcctagattgactcaagcagtaggatacaggttcatatcagcttgtctct
aattttccagagaaaatcccacctaggctaatttaagcttttcctttagt
tctttatcttataagaatggaggctcttcctttgcacctggattcttatc
tcttaccgagtcacacaaaggcactttctttgcaccactaattcatcatt
atctgctgattcatctccccaacccatggtagtatactttaaagacctta
caaatgtcactagaaaactcctgggtctgataaatacttgcagcaaagta
gcaggatacaaactcagtatacaaaatccataaattttctgtaacaaatt
ccccaaaccaatcttattaacattttattccacaaattgaaaaacatagt
tatatttgatcatgtgtcttttaaagagtcaactaacatgtctaaaagca
tactctctttcaagagatcaattgtggcaataattaacaagaaatagttc
taaaatgaaataagacccaaattaaagattataaattactttagtatgta
tacatctgctttatagagaaattagcaataaaggtcctaatagtaacttc
atgcaaagctttataatttacacatataggaacagatcattcttgcaaat
gctttcaagagtgttcttacctgctattaatcaatccactcatttactca
catttccatccatctattcatcttctcatccatcatccttcagactgttc
ttacaaactctaatcctcagaagtaaatctatggttcaaatccaacaata
aaaattcacctatttctaggattaaagttagggcatgtgaggcttatcca
ttttctgcagctttttgtgtgcaaattattcttcagtttattggagaaat
acgacccactttgtttaatcacagtgattttctct

gaattcaactcaccactttcatcaatggacagatcatggaaacagaaact
aaacagggacacagtgaaactaacagaagttatgaaacaaaaggatttaa
cagatatctacagaacattttatcctaaaacaaaaggatataccttcttc
tcagcacctcctggtaccttctccaaaattgcccatataattggtcacaa
aacaggcctcaacagatacaaaaatattgaaattgtcccatgcatcctat
cagatcaccatgaaataaggctgatcttcaataagaatataaataataga
aagccaacattcacgtggaaactgaacaaaactcttctcaatgattcctt
ggtcaaggaaggaataaagaaagaaattaaagactttttagagtttaatg
aaaatgaagccacaacatgcccaaacttatgggacacaatgaaagcattt
gtaagagggaaactcatagctctgagtgcctccaaaaagaaactagagag
agcacacactagcagatttaccacacacctaaaatctctagaagaaaaaa
aaaaaaaaagaagcaaattcacccaaaaaaacaaggcagcaggaaataat
caaactcaggggtgaaatcaaccaagtggaaacaagaactattcaaagaa
tcaaccaaacaaggagctgattctttgagaaaatcaacaagataaataaa
cccttatccagacaaactagagggtacagggacagcatcctaattaacaa
aatcagaaatgaaaagggagacacaacagatcctgaagaaattcaaaaca
ccatcagatccttctacaaaaggctatattcaacaaatcaaggggatcaa
ggggatacaaattggaaagaaagaagtcaaaatatcaccttttgcagatg
atatgatagtatatataagtgaccctaaaagtttcaccagagaactccaa
aacctgataaacagctttggtgcatagatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_40972515_40973744
seq2: B6Ng01-215C18.b_45_1279 (reverse)

seq1  AGAGAAAATCA-TGTGA-TAACAAAAGTGGGTCCTTATTTCTCCACTTAT  48
      ||||||||||| ||||| |||  ||||||||| | |||||||||| |   
seq2  AGAGAAAATCACTGTGATTAAACAAAGTGGGT-CGTATTTCTCCAAT--A  47

seq1  AACTGAAGAAATAATTTCCAC---AAAAGCTGCAGAAAATGGAT-AGCTT  94
      |||||||| |||||||| |||   |||||||||||||||||||| ||| |
seq2  AACTGAAG-AATAATTTGCACACAAAAAGCTGCAGAAAATGGATAAGCCT  96

seq1  CACATGCCCTAACTTTAATCCTAGAAATA-GTGAATTTT--ATGTTGGAT  141
      ||||||||||||||||||||||||||||| |||||||||   ||||||||
seq2  CACATGCCCTAACTTTAATCCTAGAAATAGGTGAATTTTTATTGTTGGAT  146

seq1  TTGACCAATTAGAATTTAC-TCTGAG--ATAGAGTTTGTAAGAACAGTCT  188
      |||| | | ||| |||||| ||||||   |||||||||||||||||||| 
seq2  TTGAACCA-TAG-ATTTACTTCTGAGGATTAGAGTTTGTAAGAACAGTC-  193

seq1  TGAAGGATGATGGATGAGAAGATGAATAGATGGATGGAAATGTGAGTAAA  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGATGATGGATGAGAAGATGAATAGATGGATGGAAATGTGAGTAAA  243

seq1  TGAGTGGATTGATTAATAGCAGGTAAGAACACTCTTGAAAGCATTTGCAA  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGATTGATTAATAGCAGGTAAGAACACTCTTGAAAGCATTTGCAA  293

seq1  GAATGATCTGTTCCTATATGTGTAAATTATAAAGCTTTGCATGAAGTTAC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATCTGTTCCTATATGTGTAAATTATAAAGCTTTGCATGAAGTTAC  343

seq1  TATTAGGACCTTTATTGCTAATTTCTCTATAAAGCAGATGTATACATACT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGACCTTTATTGCTAATTTCTCTATAAAGCAGATGTATACATACT  393

seq1  AAAGTAATTTATAATCTTTAATTTGGGTCTTATTTCATTTTAGAACTATT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAATTTATAATCTTTAATTTGGGTCTTATTTCATTTTAGAACTATT  443

seq1  TCTTGTTAATTATTGCCACAATTGATCTCTTGAAAGAGAGTATGCTTTTA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTAATTATTGCCACAATTGATCTCTTGAAAGAGAGTATGCTTTTA  493

seq1  GACATGTTAGTTGACTCTTTAAAAGACACATGATCAAATATAACTATGTT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTTAGTTGACTCTTTAAAAGACACATGATCAAATATAACTATGTT  543

seq1  TTTCAATTTGTGGAATAAAATGTTAATAAGATTGGTTTGGGGAATTTGTT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTTGTGGAATAAAATGTTAATAAGATTGGTTTGGGGAATTTGTT  593

seq1  ACAGAAAATTTATGGATTTTGTATACTGAGTTTGTATCCTGCTACTTTGC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAATTTATGGATTTTGTATACTGAGTTTGTATCCTGCTACTTTGC  643

seq1  TGCAAGTATTTATCAGACCCAGGAGTTTTCTAGTGACATTTGTAAGGTCT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGTATTTATCAGACCCAGGAGTTTTCTAGTGACATTTGTAAGGTCT  693

seq1  TTAAAGTATACTACCATGGGTTGGGGAGATGAATCAGCAGATAATGATGA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTATACTACCATGGGTTGGGGAGATGAATCAGCAGATAATGATGA  743

seq1  ATTAGTGGTGCAAAGAAAGTGCCTTTGTGTGACTCGGTAAGAGATAAGAA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGGTGCAAAGAAAGTGCCTTTGTGTGACTCGGTAAGAGATAAGAA  793

seq1  TCCAGGTGCAAAGGAAGAGCCTCCATTCTTATAAGATAAAGAACTAAAGG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTGCAAAGGAAGAGCCTCCATTCTTATAAGATAAAGAACTAAAGG  843

seq1  AAAAGCTTAAATTAGCCTAGGTGGGATTTTCTCTGGAAAATTAGAGACAA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTAAATTAGCCTAGGTGGGATTTTCTCTGGAAAATTAGAGACAA  893

seq1  GCTGATATGAACCTGTATCCTACTGCTTGAGTCAATCTAGGATCAACAGT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATATGAACCTGTATCCTACTGCTTGAGTCAATCTAGGATCAACAGT  943

seq1  AGTTGCTAGAGAGGTGCTCTGTGTGCTGGGAGGCAGGTGCCTCTGTGATT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTAGAGAGGTGCTCTGTGTGCTGGGAGGCAGGTGCCTCTGTGATT  993

seq1  TTTTTCAGAGACCCAAGACTGTCACATTTCCATCTAAACTGTGGTTCAAA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGAGACCCAAGACTGTCACATTTCCATCTAAACTGTGGTTCAAA  1043

seq1  GCTCCATGAACCTGTAACTTATTCATTTTGTATGCCCTAAAAAAAAGGAC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCATGAACCTGTAACTTATTCATTTTGTATGCCCTAAAAAAAAGGAC  1093

seq1  TTGGAAGGGACTGCCAAAGTCTTCTGCCAACTTGAATTGTAGTCTAGACA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGGGACTGCCAAAGTCTTCTGCCAACTTGAATTGTAGTCTAGACA  1143

seq1  ATTTCTGACATAGCTATTATGACAACTGTGTATCATGGCAGATGAATATG  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGACATAGCTATTATGACAACTGTGTATCATGGCAGATGAATATG  1193

seq1  TTAAAACACTTTTGGGTCCTCTTTACCCTAGGTAGAGAATTC  1230
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACACTTTTGGGTCCTCTTTACCCTAGGTAGAGAATTC  1235


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