BAC Information

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BAC

Clone NameB6Ng01-216N13
Chromosome14 (Build37)
Map Location 95,055,291 - 95,056,106
singlet/doubletsinglet
Overlap genenone
Upstream genePcdh9, LOC100043356
Downstream geneLOC100043783, LOC677613, LOC100043784, LOC382931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216N13.bB6Ng01-216N13.g
ACCGA033429GA033430
length8481,080
definitionB6Ng01-216N13.b B6Ng01-216N13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatatacaccacattagtatggtttgaggttattaacactag
tttattttgttgtaatttttaattttcacaaagcttagggaaacaacttg
taaatggaaataatttgagtcaggaatggtttgttattcatttcagtcag
tgttgtgttgaaataccttctgctacgaagccactcatcatggaaggaca
ttccctgaagcagggaatgtcaaaagaagagctaaaagaaagcatatcta
aggggagttgacccagaaattgatacaatatatctaggactcatcttttc
caagcatatataagctggaggaactggtgaaggacacacttagacaaatt
gaacttcctagaagaaacagagatcagctgagcagcctagaaagaggata
aagacattctcccatgccttaagctgtgcagtgtgttcctgctttccagc
tcttttgaggtgtttctcatgctgtgatatgctctggttagtcagctatc
tatctttgagtcatttttgttcttgtaagcagccactcacacaaattctt
ataagaaaagtctatatcatcctgagtgaggtaacacagagccaaaagga
cattcatggtatgtactcactaataagtgaaattaatatcactaataagt
gatattagccaaaaaatacagaatgcttaggatataacccacagaattta
agaaatttaacaagcagaaaggccaagggaggatacttcaattccactta
gtagagaaaagaaaataatcacaggaggcagccggatccaggctttgaga
aggagaggggagggggagggcaacgtggaacaggatcaggtatgttgg

gaattcttccttcttccatctttactttcctgcttagatgtcttaaagtc
ttatgatacaagtttttaacttgctaaatcagagctaccccatgatattt
tgtagtttttgagcctattgtggttttgtatgtattctttctcagtatat
ttgtatacaggaaggctattaaaatttttgtttgttagtattttatccta
ctactattttgaaaatatttatgagatgtaggaacttcgtggtataattt
taaggtcacttttctataatactgtatcatcttcaattaagatactgtag
cttcttccttcccaatttttatccatttgatttcttcacatttcctgtcg
ttccttaaagtactaaaataattaggtgtgtaaagtaaagagcacacaac
cttattttacttctaattttagataaaatgctttgggtttctcctcatta
aagttgattttggcaatgggttttctataaattgcttttagcatactgag
acatttctcttgtatcctattctccaggacttttatcatggaggggagtt
ggatttttttcaaaggccttttctgcatcaagtaaaatgatcatggttat
attcttgttgaatatatagtaccattatctactataatatcctatacata
taaaattttaataattatcatgaggcctaaagaaaagagtaaaggaagga
acaagaaaggtgtccacatgttcatcaaaatttttattttatttttaaag
cctgagatatcactgggaggaagaaacacaaactttggtttaatatgttt
atttctttcacagttttgtttgtttgctttagaatagacatagactcagt
ggaaggtgaaagtattgaaaattaaaattaaaaaattcataactgaatga
ttacatttgccaagaagaatcaaaagagacacagactaatgcataagatg
cttgctgcttgcttctctaagcttttgtatgggttccaagaagaaatgtg
gggtaggtttcatcagatgtcctcttttttgggaggtttgttaagcatac
tacatttttctcatgaacaaaaactgtata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_95055291_95056106
seq2: B6Ng01-216N13.b_46_860

seq1  GAATTCTTTATATACACCACATTAGTATGGTTTGAGGTTATTAACACTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATATACACCACATTAGTATGGTTTGAGGTTATTAACACTAG  50

seq1  TTTATTTTGTTGTAATTTTTAATTTTCACAAAGCTTAGGGAAACAACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTGTTGTAATTTTTAATTTTCACAAAGCTTAGGGAAACAACTTG  100

seq1  TAAATGGAAATAATTTGAGTCAGGAATGGTTTGTTATTCATTTCAGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGAAATAATTTGAGTCAGGAATGGTTTGTTATTCATTTCAGTCAG  150

seq1  TGTTGTGTTGAAATACCTTCTGCTACGAAGCCACTCATCATGGAAGGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGTTGAAATACCTTCTGCTACGAAGCCACTCATCATGGAAGGACA  200

seq1  TTCCCTGAAGCAGGGAATGTCAAAAGAAGAGCTAAAAGAAAGCATATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGAAGCAGGGAATGTCAAAAGAAGAGCTAAAAGAAAGCATATCTA  250

seq1  AGGGGAGTTGACCCAGAAATTGATACAATATATCTAGGACTCATCTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGTTGACCCAGAAATTGATACAATATATCTAGGACTCATCTTTTC  300

seq1  CAAGCATATATAAGCTGGAGGAACTGGTGAAGGACACACTTAGACAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATATATAAGCTGGAGGAACTGGTGAAGGACACACTTAGACAAATT  350

seq1  GAACTTCCTAGAAGAAACAGAGATCAGCTGAGCAGCCTAGAAAGAGGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCCTAGAAGAAACAGAGATCAGCTGAGCAGCCTAGAAAGAGGATA  400

seq1  AAGACATTCTCCCATGCCTTAAGCTGTGCAGTGTGTTCCTGCTTTCCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTCTCCCATGCCTTAAGCTGTGCAGTGTGTTCCTGCTTTCCAGC  450

seq1  TCTTTTGAGGTGTTTCTCATGCTGTGATATGCTCTGGTTAGTCAGCTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGAGGTGTTTCTCATGCTGTGATATGCTCTGGTTAGTCAGCTATC  500

seq1  TATCTTTGAGTCATTTTTGTTCTTGTAAGCAGCCACTCACACAAATTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTGAGTCATTTTTGTTCTTGTAAGCAGCCACTCACACAAATTCTT  550

seq1  ATAAGAAAAGTCTATATCATCCTGAGTGAGGTAACACAGAGCCAAAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAAAGTCTATATCATCCTGAGTGAGGTAACACAGAGCCAAAAGGA  600

seq1  CATTCATGGTATGTACTCACTAATAAGTGAAATTAATATCACTAATAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATGGTATGTACTCACTAATAAGTGAAATTAATATCACTAATAAGT  650

seq1  GATATTAGCCAAAAAATACAGAATGCTTAGGATATAACCCACAGAATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAGCCAAAAAATACAGAATGCTTAGGATATAACCCACAGAATTTA  700

seq1  AGAAATTTAACAAGCAGAAAGGCCAAGGGAGGATACTTCAATTCCACTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTAACAAGCAGAAAGGCCAAGGGAGGATACTTCAATTCCACTTA  750

seq1  GTAGAGAAAAGAAAATAATCACAGGAGGCAGCCGGATCCAGGGCTTTGAG  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTAGAGAAAAGAAAATAATCACAGGAGGCAGCCGGATCCA-GGCTTTGAG  799

seq1  AAGGAGAGGGGAGGGG  816
      ||||||||||||||||
seq2  AAGGAGAGGGGAGGGG  815


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