BAC Information

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BAC

Clone NameB6Ng01-218D17
Chromosome14 (Build37)
Map Location 95,892,731 - 96,002,930
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043783, LOC677613, LOC100043784, LOC382931
Downstream gene4921530L21Rik, Klhl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218D17.bB6Ng01-218D17.g
ACCGA034415GA034416
length1,2181,115
definitionB6Ng01-218D17.b B6Ng01-218D17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,001,718 - 96,002,930)(95,892,731 - 95,893,847)
sequence
gaattctatctacaatatactaagtatcaggtatccataaattttttgac
tacagtgtttggctaatgtaaaaactaactgagttaataataaatatgtt
ttagcactatatacatcaataaaaaaaaaaaaactccagaggactagtaa
agcatcctccaaaagaaagtgcattgaaagccaattccagagaaccatca
aaatttaataacaacatttttccacatgagtaaaacattcacagtgcgtg
ttaaaggagataattaagggttacaggacatgaaaagttgctttcattct
agagttacaaggatggatccataatcaaaaaatcaatgagtgtcatatgt
aacgttaatagactcaaagaatagaaccacatgaccaataagtcaagtta
aagtctaaaaccaagttcaaaccctatgataatggaagagctacaaaaat
tgggaatttagtaagacctaaacataatacatgcaatgtactatgcacct
atacaggacttgatatactattaggtggaatactaacaaaacattcccac
tagtatcagtgcagagcaaaacagggtccttactttttaaaattcatgca
atataaaccttaagtatttaggtagatcaataatactggaaaaagaaaga
aagaacagtacaccatctcattccttggggccatttgcttggaatttttt
ttctaaccttttattctaagggaatgtccatttctgatataaaagtgtgt
ttcttgtatgcaggatggatctattctgttattctgggtcttttcatttg
ggaattgagtccattgttattgaaagatattaatgcccaaagattgttaa
ttcctactatttcattgtagatattgttggtggctttgtgtgtatacatg
tatgtatatgttttgtttcttgatattttaatttaaggaatattctgcta
tgtatgctaggtcagaactgtatgtgaaaaaaagacaaaaaagaaaacaa
aagaaaggaacaaacccttgaaaagaagtcattttatgactattgacaga
agtatgattcagagcataaaaagattctaaatgctaccactaaaaaaata
tcaaactaaaataacaagttcagccaaaaagcaagaattaaaatcaacac
acaaaatcagccactttctaactgtcagtttacaaacatgtcctaagaga
aaaaaatcttgtggaaaa
gaattctttctcagatggatttatagccatttacgtgtctcctaccatgt
ttaacagattatgcattctaactcgaatgcctatgtttgggtcttttgtt
ttatttagatttttcccacattattttgtgtttatattactgccaacaac
tgtgaattactttgaggaaagaacgtggtgatcgtctctcctcctatgct
tccatgtgtttatgacattggccggtaattaggtgaatagccatggaatt
aattaaattctctttagcccatttaaaaaattctacaagagatgggcaaa
atattcagagcatagcatgtcctcagaatgttcataatgtcgactcttag
aacacagcagaaaagaattcatctctcatctatatgttgtaaaatttaaa
ttatgaatgcttaccttgtaatagggataacctgatgttgtcatagagtc
cctgaaatataaatttacacttttaattttaaaatatcaggacataataa
ccagaaattaaactaacatcacacatgagggattttatttaatacatttc
ttttaaatttacatatctgagatgtcttaaatggtggctccatatttcct
acttatttctgttagtaattccaagggcttgtcaagttccctccactccc
ctgaggattcatgtcatggattactatttacatttctattaatcatgcct
tccattcggtttgcatgcaacaaacttaaaacacactcaaaaatctgccc
tacttactagaatgctgttgaattcctacacgtctcatagttttgcactg
atacacacaaagcttcaaagctggtctaggtcaatttattaaaaaatgaa
cagagatcaactcacttgtgtgtctgactgtcaaacagcctgcacatgac
tcagtaagacaggtcaatcttcctggatattcatttgcccttgagccctt
ctcttcatctgtcagtctttctcaatgaaataaggtcccattcattttta
attaggtgatattgcttcgctcactgacggtcgtctacactttgttctga
ctacatagtagctcaggaagaaccttcttgtattcagtatattttttaat
ctttccaagcattgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_96001718_96002930
seq2: B6Ng01-218D17.b_47_1264 (reverse)

seq1  TTTTCC---AGATTTTTT--TCTTAG--CATGTTTGT-AATTGACATGTA  42
      ||||||   |||||||||  ||||||  ||||||||| || |||||  ||
seq2  TTTTCCACAAGATTTTTTTCTCTTAGGACATGTTTGTAAACTGACAGTTA  50

seq1  GAAAAGTTGCTGAATTTTGTGTGTTGATTTTATATCCTGCTTTTTTGCTG  92
      | ||||| |||| |||||||||||||||||||  || |||||||| ||||
seq2  G-AAAGTGGCTG-ATTTTGTGTGTTGATTTTAATTCTTGCTTTTTGGCTG  98

seq1  AAACTGTTATCTAGTTTTAATATTTTTTTTAGT-GTAGCATTTAGAATC-  140
      ||  |||||| |   ||| ||| |||||||||| ||||||||||||||| 
seq2  AACTTGTTATTTTAGTTTGATA-TTTTTTTAGTGGTAGCATTTAGAATCT  147

seq1  TTTTATGCTCTGAATCATACTTCTTGTCAATAGTCATAAAATGACTTCTT  190
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTTTATGCTCTGAATCATACTTC-TGTCAATAGTCATAAAATGACTTCTT  196

seq1  TTCAAGGTTTTGTTCCTTTTCTTTTGTTTTTCTTTTTTTGTCTTTTTTTC  240
      ||||||| |||||||| |||||||||||||   |||||||||||||||||
seq2  TTCAAGGGTTTGTTCC-TTTCTTTTGTTTT--CTTTTTTGTCTTTTTTTC  243

seq1  ACATACAGTTCTGACCTAGCATACATAGCAGAATATTCCTT-AATTAAAA  289
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACATACAGTTCTGACCTAGCATACATAGCAGAATATTCCTTAAATTAAAA  293

seq1  TATCAAGAAACAAAACATATACATACATGTATACACACAAAGCCACCAAC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGAAACAAAACATATACATACATGTATACACACAAAGCCACCAAC  343

seq1  AATATCTACAATGAAATAGTAGGAATTAACAATCTTTGGGCATTAATATC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTACAATGAAATAGTAGGAATTAACAATCTTTGGGCATTAATATC  393

seq1  TTTCAATAACAATGGACTCAATTCCCAAATGAAAAGACCCAGAATAACAG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATAACAATGGACTCAATTCCCAAATGAAAAGACCCAGAATAACAG  443

seq1  AATAGATCCATCCTGCATACAAGAAACACACTTTTATATCAGAAATGGAC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATCCATCCTGCATACAAGAAACACACTTTTATATCAGAAATGGAC  493

seq1  ATTCCCTTAGAATAAAAGGTTAGAAAAAAAATTCCAAGCAAATGGCCCCA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTTAGAATAAAAGGTTAGAAAAAAAATTCCAAGCAAATGGCCCCA  543

seq1  AGGAATGAGATGGTGTACTGTTCTTTCTTTCTTTTTCCAGTATTATTGAT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGAGATGGTGTACTGTTCTTTCTTTCTTTTTCCAGTATTATTGAT  593

seq1  CTACCTAAATACTTAAGGTTTATATTGCATGAATTTTAAAAAGTAAGGAC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTAAATACTTAAGGTTTATATTGCATGAATTTTAAAAAGTAAGGAC  643

seq1  CCTGTTTTGCTCTGCACTGATACTAGTGGGAATGTTTTGTTAGTATTCCA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTTGCTCTGCACTGATACTAGTGGGAATGTTTTGTTAGTATTCCA  693

seq1  CCTAATAGTATATCAAGTCCTGTATAGGTGCATAGTACATTGCATGTATT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATAGTATATCAAGTCCTGTATAGGTGCATAGTACATTGCATGTATT  743

seq1  ATGTTTAGGTCTTACTAAATTCCCAATTTTTGTAGCTCTTCCATTATCAT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAGGTCTTACTAAATTCCCAATTTTTGTAGCTCTTCCATTATCAT  793

seq1  AGGGTTTGAACTTGGTTTTAGACTTTAACTTGACTTATTGGTCATGTGGT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTGAACTTGGTTTTAGACTTTAACTTGACTTATTGGTCATGTGGT  843

seq1  TCTATTCTTTGAGTCTATTAACGTTACATATGACACTCATTGATTTTTTG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCTTTGAGTCTATTAACGTTACATATGACACTCATTGATTTTTTG  893

seq1  ATTATGGATCCATCCTTGTAACTCTAGAATGAAAGCAACTTTTCATGTCC  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGATCCATCCTTGTAACTCTAGAATGAAAGCAACTTTTCATGTCC  943

seq1  TGTAACCCTTAATTATCTCCTTTAACACGCACTGTGAATGTTTTACTCAT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCCTTAATTATCTCCTTTAACACGCACTGTGAATGTTTTACTCAT  993

seq1  GTGGAAAAATGTTGTTATTAAATTTTGATGGTTCTCTGGAATTGGCTTTC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAAATGTTGTTATTAAATTTTGATGGTTCTCTGGAATTGGCTTTC  1043

seq1  AATGCACTTTCTTTTGGAGGATGCTTTACTAGTCCTCTGGAG-TTTTTTT  1088
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AATGCACTTTCTTTTGGAGGATGCTTTACTAGTCCTCTGGAGTTTTTTTT  1093

seq1  TTTTTATTGATGTATATAGTGCTAAAACATATTTATTATTAACTCAGTTA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTGATGTATATAGTGCTAAAACATATTTATTATTAACTCAGTTA  1143

seq1  GTTTTTACATTAGCCAAACACTGTAGTCAAAAAATTTATGGATACCTGAT  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTACATTAGCCAAACACTGTAGTCAAAAAATTTATGGATACCTGAT  1193

seq1  ACTTAGTATATTGTAGATAGAATTC  1213
      |||||||||||||||||||||||||
seq2  ACTTAGTATATTGTAGATAGAATTC  1218

seq1: chr14_95892731_95893847
seq2: B6Ng01-218D17.g_63_1177

seq1  GAATTCTTTCTCAGATGGATTTATAGCCATTTACGTGTCTCCTACCATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCAGATGGATTTATAGCCATTTACGTGTCTCCTACCATGT  50

seq1  TTAACAGATTATGCATTCTAACTCGAATGCCTATGTTTGGGTCTTTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGATTATGCATTCTAACTCGAATGCCTATGTTTGGGTCTTTTGTT  100

seq1  TTATTTAGATTTTTCCCACATTATTTTGTGTTTATATTACTGCCAACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGATTTTTCCCACATTATTTTGTGTTTATATTACTGCCAACAAC  150

seq1  TGTGAATTACTTTGAGGAAAGAACGTGGTGATCGTCTCTCCTCCTATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATTACTTTGAGGAAAGAACGTGGTGATCGTCTCTCCTCCTATGCT  200

seq1  TCCATGTGTTTATGACATTGGCCGGTAATTAGGTGAATAGCCATGGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTGTTTATGACATTGGCCGGTAATTAGGTGAATAGCCATGGAATT  250

seq1  AATTAAATTCTCTTTAGCCCATTTAAAAAATTCTACAAGAGATGGGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATTCTCTTTAGCCCATTTAAAAAATTCTACAAGAGATGGGCAAA  300

seq1  ATATTCAGAGCATAGCATGTCCTCAGAATGTTCATAATGTCGACTCTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAGAGCATAGCATGTCCTCAGAATGTTCATAATGTCGACTCTTAG  350

seq1  AACACAGCAGAAAAGAATTCATCTCTCATCTATATGTTGTAAAATTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGCAGAAAAGAATTCATCTCTCATCTATATGTTGTAAAATTTAAA  400

seq1  TTATGAATGCTTACCTTGTAATAGGGATAACCTGATGTTGTCATAGAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAATGCTTACCTTGTAATAGGGATAACCTGATGTTGTCATAGAGTC  450

seq1  CCTGAAATATAAATTTACACTTTTAATTTTAAAATATCAGGACATAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAATATAAATTTACACTTTTAATTTTAAAATATCAGGACATAATAA  500

seq1  CCAGAAATTAAACTAACATCACACATGAGGGATTTTATTTAATACATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATTAAACTAACATCACACATGAGGGATTTTATTTAATACATTTC  550

seq1  TTTTAAATTTACATATCTGAGATGTCTTAAATGGTGGCTCCATATTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTTACATATCTGAGATGTCTTAAATGGTGGCTCCATATTTCCT  600

seq1  ACTTATTTCTGTTAGTAATTCCAAGGGCTTGTCAAGTTCCCTCCACTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTCTGTTAGTAATTCCAAGGGCTTGTCAAGTTCCCTCCACTCCC  650

seq1  CTGAGGATTCATGTCATGGATTACTATTTACATTTCTATTAATCATGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGATTCATGTCATGGATTACTATTTACATTTCTATTAATCATGCCT  700

seq1  TCCATTCGGTTTGCATGCAACAAACTTAAAACACACTCAAAAATCTGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCGGTTTGCATGCAACAAACTTAAAACACACTCAAAAATCTGCCC  750

seq1  TACTTACTAGAATGCTGTTGAATTCCTACACGTCTCATAGTTTTGCACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACTAGAATGCTGTTGAATTCCTACACGTCTCATAGTTTTGCACTG  800

seq1  ATACACACAAAGCTTCAAAGCTGGTCTAGGTCAATTTATTAAAAAATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACAAAGCTTCAAAGCTGGTCTAGGTCAATTTATTAAAAAATGAA  850

seq1  CAGAGATCAACTCACTTGTGTGTCTGACTGTCAAACAGCCTGCACATGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATCAACTCACTTGTGTGTCTGACTGTCAAACAGCCTGCACATGAC  900

seq1  TCAGTAAGACAGGTCAATCTTCCTGGATATTCATTTGCCCTTGAGCCCTT  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCAGTAAGACAGGTCAATCTTCCTGGATATTCATTTGCCCTTGAGCCC-T  949

seq1  TCTCTTCATCTGTCAGTCTTTTCTCAATGGAAATAA-GTCCCATTCATTT  999
      |||||||||||||||||| ||||||||| ||||||| |||||||||||||
seq2  TCTCTTCATCTGTCAGTC-TTTCTCAAT-GAAATAAGGTCCCATTCATTT  997

seq1  TTAATTAGTTGATATTGCTTCGCTCACTGACGGTCGTCTAACACTTTG-T  1048
      |||||||| |||||||||||||||||||||||||||||| |||||||| |
seq2  TTAATTAGGTGATATTGCTTCGCTCACTGACGGTCGTCT-ACACTTTGTT  1046

seq1  CTGACTACATAGTAGGCTCAGG-AGACCCTTC-TGTATTCAGTATATTTT  1096
      |||||||||||||| ||||||| ||| ||||| |||||||||||||||||
seq2  CTGACTACATAGTA-GCTCAGGAAGAACCTTCTTGTATTCAGTATATTTT  1095

seq1  TTAAATCTTTCAAAGCATTGT  1117
      || |||||||| |||||||||
seq2  TT-AATCTTTCCAAGCATTGT  1115