BAC Information

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BAC

Clone NameB6Ng01-219A18
Chromosome14 (Build37)
Map Location 29,471,590 - 29,472,720
singlet/doubletsinglet
Overlap genenone
Upstream geneErc2, LOC100040206, Wnt5a, LOC100040218
Downstream geneCacna2d3, Lrtm1, Ppia-ps15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219A18.bB6Ng01-219A18.g
ACCGA035005GA035006
length1,1461,135
definitionB6Ng01-219A18.b B6Ng01-219A18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttaatagggtttagttttct
gaagtctgacttcttgagttctttatatatattggatattagccccctat
ctgatttaggattggtaaagatcttttcccaatctgttggttgccttctg
gtcttattgacaatgtcctttgccttacagaagctttgcaattttatcag
gtcccatctgtcgattcttgatcataggacaaaagccattgctgttctgt
ttaggaatttttcccctgtgcccatatcttcgaggatcttccccactttc
acctctataagtttcagtgtctctggttttatgtggagttctttggtcca
tttagacttgagctttgtacaaggacataagaatggatcaattcacattc
ttctacatgctaaacaccagttgaaccagaaccatttgttgaagatgctt
tcttctttctattggatggctttagctcctttgtccaagatcaagtgacc
ataggtgtgtgggttcatttctgggtcttcgattctattccattgatcta
cctatctgtcactgtaccagtaccatgcagttttttttatcacaattgct
ctgtagtacagcttgaggttaggcatggtgattccaccaaaggttctttt
attgttgaaaagagtttttgctatcccaggatttttgttattccagatga
atatgcaattgccctttctaactttgtgaagaactgagttggtattttga
tggggattttgactatattaatcctgccaatccatgagcatgagagatct
ttcaatcttctgagatcttcattgattttctttcttcagagacttgaagt
ttcttatcatacagataagaacttttcacttccaccaggtagtcacacca
aggtattttatattatttgtgactatgtgaagggtgttaaattaacctta
tttctttctctgcctgttaatcctttgtgtaggcaaaggccactgatttg
ttgagttcatttttatatccagcctattgcactgaaagtgtttatttagt
ttaggagtctcttgtgaattttggatcctctaactatactatcattactc
ttctgtcaatagtgactatttgaacctcttacctttccaaaatagt

gaattcaagtccctcagtagtcaagccatatatttttcctttgacataaa
gtttctgtctctcaagagagagggtgaggagattaaatttttatttttat
atatttaatatttttctttaatgctactcaacgcacaaaagcagatttat
ccattgaattctaggtggtgttttgacatatgtggtgcaatgtttaagtc
aaaatttatcatcttcctaaaacttttgtgtatcatttctttatagtgaa
aatacccagaattctttcttctagacacttaagatggaaagtagatggtg
taggtatctttagtcaccacaaaaacccagatcccctttctcttatttaa
ctgtaacttgttactcaactgatccacttttacccatctctctctagtaa
agtctgttgcccatttttaagcagttgacattgaaataacagtagagtgt
gtgcaggcgagaaggcccagaagctaagagcacgtactggtctggtagag
aagattgatttatttcccggcatccacattgagcatcttataagggcaga
taattccagcctctggatatcctttatcgctggccaccatgggtacctgc
cttagtttacacattctcctacaaagtcacatgtgcatacaaataattga
agacaaaactttataaatgtttggatttccttatgtggtctgcatatttt
gagacatatattctcccccattccatatgtaggttgtctcttctctctga
cggttctttactttctcaaggcttctgagtttgtcataaatctactgacc
tttggttttgttttctgctgtccaaatccttgcccattccaagtgtctgc
cctgtgttttcttctagtggttttagtttggggtcttgatgtttaagact
ttcagtccatctttcagtttgatttttacagcaactgtaaagagctagaa
gtagagtttttattctttctcatgtgaatgggccagtgacccactcctgt
ttctgagatgctgaccctcccttggtttagggactatgattttatagatt
cctacctgtcttcttaacattgcactcctttgttcatgatggtccctgaa
cttacagtgggtgtgctttcaacctctgaggctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_29471590_29472720
seq2: B6Ng01-219A18.g_66_1200

seq1  GAATTCAAGTCCCTCAGTAGTCAAGCCATATATTTTTCCTTTGACATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTCCCTCAGTAGTCAAGCCATATATTTTTCCTTTGACATAAA  50

seq1  GTTTCTGTCTCTCAAGAGAGAGGGTGAGGAGATTAAATTTTTATTTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGTCTCTCAAGAGAGAGGGTGAGGAGATTAAATTTTTATTTTTAT  100

seq1  ATATTTAATATTTTTCTTTAATGCTACTCAACGCACAAAAGCAGATTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAATATTTTTCTTTAATGCTACTCAACGCACAAAAGCAGATTTAT  150

seq1  CCATTGAATTCTAGGTGGTGTTTTGACATATGTGGTGCAATGTTTAAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGAATTCTAGGTGGTGTTTTGACATATGTGGTGCAATGTTTAAGTC  200

seq1  AAAATTTATCATCTTCCTAAAACTTTTGTGTATCATTTCTTTATAGTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATCATCTTCCTAAAACTTTTGTGTATCATTTCTTTATAGTGAA  250

seq1  AATACCCAGAATTCTTTCTTCTAGACACTTAAGATGGAAAGTAGATGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCCAGAATTCTTTCTTCTAGACACTTAAGATGGAAAGTAGATGGTG  300

seq1  TAGGTATCTTTAGTCACCACAAAAACCCAGATCCCCTTTCTCTTATTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATCTTTAGTCACCACAAAAACCCAGATCCCCTTTCTCTTATTTAA  350

seq1  CTGTAACTTGTTACTCAACTGATCCACTTTTACCCATCTCTCTCTAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACTTGTTACTCAACTGATCCACTTTTACCCATCTCTCTCTAGTAA  400

seq1  AGTCTGTTGCCCATTTTTAAGCAGTTGACATTGAAATAACAGTAGAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTTGCCCATTTTTAAGCAGTTGACATTGAAATAACAGTAGAGTGT  450

seq1  GTGCAGGCGAGAAGGCCCAGAAGCTAAGAGCACGTACTGGTCTGGTAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGGCGAGAAGGCCCAGAAGCTAAGAGCACGTACTGGTCTGGTAGAG  500

seq1  AAGATTGATTTATTTCCCGGCATCCACATTGAGCATCTTATAAGGGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGATTTATTTCCCGGCATCCACATTGAGCATCTTATAAGGGCAGA  550

seq1  TAATTCCAGCCTCTGGATATCCTTTATCGCTGGCCACCATGGGTACCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCAGCCTCTGGATATCCTTTATCGCTGGCCACCATGGGTACCTGC  600

seq1  CTTAGTTTACACATTCTCCTACAAAGTCACATGTGCATACAAATAATTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTTACACATTCTCCTACAAAGTCACATGTGCATACAAATAATTGA  650

seq1  AGACAAAACTTTATAAATGTTTGGATTTCCTTATGTGGTCTGCATATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAACTTTATAAATGTTTGGATTTCCTTATGTGGTCTGCATATTTT  700

seq1  GAGACATATATTCTCCCCCATTCCATATGTAGGTTGTCTCTTCTCTCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATATATTCTCCCCCATTCCATATGTAGGTTGTCTCTTCTCTCTGA  750

seq1  CGGTTCTTTACTTTCTCAAGGCTTCTGAGTTTGTCATAAATCTACTGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTCTTTACTTTCTCAAGGCTTCTGAGTTTGTCATAAATCTACTGACC  800

seq1  TTTGGTTTTGTTTTCTGCTGTCCAAATCCTTGCCCATTCCAAGTGTCTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTGTTTTCTGCTGTCCAAATCCTTGCCCATTCCAAGTGTCTGC  850

seq1  CCTGTGTTTTCTTCTAGTGGTTTTAGTTTGGGGTCTTGATGTTTAAGAC-  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCTGTGTTTTCTTCTAGTGGTTTTAGTTTGGGGTCTTGATGTTTAAGACT  900

seq1  TTCAGTCCATC-TTCAG-TTGATTTTTACAGCAACTGTAAAAGAGCTAGA  947
      ||||||||||| ||||| |||||||||||||||||||| |||||||||||
seq2  TTCAGTCCATCTTTCAGTTTGATTTTTACAGCAACTGT-AAAGAGCTAGA  949

seq1  AGTAGAG-TTTTATTCTTCTCCATGTGAAT-GGCCAGTGACCCCACTCCT  995
      ||||||| ||||||||||   ||||||||| ||||||||| |||||||||
seq2  AGTAGAGTTTTTATTCTTTCTCATGTGAATGGGCCAGTGA-CCCACTCCT  998

seq1  GTTTCTGAGGATGCTGACCCTCCCTTGGTTAAGGGACTATGATTTTATAG  1045
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  GTTTCTGA-GATGCTGACCCTCCCTTGGTTTAGGGACTATGATTTTATAG  1047

seq1  ATTTCCTACCTGTCT--CTAACATTGCAACTCCCTTTGTCATGTTGGT-C  1092
      | |||||||||||||   ||||||||| ||||| ||  ||||| |||| |
seq2  A-TTCCTACCTGTCTTCTTAACATTGC-ACTCCTTTGTTCATGATGGTCC  1095

seq1  CTG-ACTTACAGTTGGTGTGCCTTCAACCTCTGATGCTAC  1131
      ||| ||||||||| ||||||| |||||||||||| |||||
seq2  CTGAACTTACAGTGGGTGTGCTTTCAACCTCTGAGGCTAC  1135


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