BAC Information

Click to search

BAC

Clone NameB6Ng01-219F14
Chromosome14 (Build37)
Map Location 120,814,510 - 120,815,487
singlet/doubletsinglet
Overlap geneMbnl2
Upstream geneHs6st3, EG621324, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831
Downstream geneRap2a, LOC668835, LOC668837, Ranbp5, Farp1, LOC100043837, Stk24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219F14.bB6Ng01-219F14.g
ACCGA035212GA035213
length1,217983
definitionB6Ng01-219F14.b B6Ng01-219F14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcatttctgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttactgacagtgtcttttgccttgcagaaattttggagtttcat
tacgtcccatttgtcaattctcgatcttacagtacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctcttgttttatgtgaagttccttggt
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacatgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcgtcgaagatcaagtgacca
taggtgtgtgggttcatttctgggtcttcaattctattccattggtttac
ttgtctgtctctataccagtaacatgcagtttttatcgcaattgctctgt
agtaaagctttaggtcaggcatggtgattccaccagaggttcttttatcc
ttgagaagactttttgctatcctaggtttttgttattccagatgaatttg
caaattgctccttctaattcgttaaagaattgagttggaattttgatggg
gattgcattgaatctgtagattgcttttggcaagatagccatttttacaa
tgttgatcctgccaatccaggagcatgggagatctttccatcttctgaga
tcttctttaatttctttcttcagagatttgaagtttttatcatacagatc
tttcacttccttagttagagtcacaccaagataatttttatattatttgt
gaactattgagaagggtgtgttttccctaatttctttctcaagttctgtt
tatttctttgtatagagaaagtcaattggactgtttgagtttatttatat
tccagctacttcaccgagctgtttatcaggtttagaagttctctggttga
ttttaggtcacttttaattacctagtcatatcatctgccaaagggaattt
ggactctcgtaccatgtaatccctggaactgctttgatgacgagattgcc
tcgtggctactaatact
gaattctctctctgaaagcacaaacgtccctgaagggaccatcagagatg
ctgaggaatatgcccaaggttatcctgcaaagccagatttcaaacttctc
taaacttctaaatctccattttatagtaaaaccctagagtattggactgg
cttgctcccggctatacaaggatgagaaacttggtctcctaacagtacat
ttaggcccttttttgctccaccaaagcatggtttacatcgagttggtagc
tataagaacttatggaaatatggaacttagcttcctccttggagcataga
agggtttgtgagtaagcaaagatatcagagaatttgaactttgttttcct
atgtgtattttcctggtgtcaagtcgtgcctgttccatcaatccaaatgt
ctgtatgtgccattgctgttccacagtaaacagtgggggcataaaacagc
ttttgttccatgggttcaggacaagggcattgcttgaaaagattcctatt
gctcatgttcttttctgggctcttcagacccttgaaacatgagtgtggac
agaggtttaaaaagggagacctaagaaatgtgtaaaggtaaagatgaagt
ccgttgtgtgctctgcccctagaagggagaagaatcctattatgtgccct
gccactggacggggaatttgagtttactttttgggaagttttatgtcagt
ttgttaagcataagtggacagtccctgctaacttctgaagcatatgcagg
aactacgtgagaagcgaactcttcaaagctgagctgcaggcatttacttg
ttaaacaagattagttctcagaagtgtccatgaatagtcattttctctaa
gcacaggaatctagaaataattaataaattaatgtagctgtggaaatatt
tacattttgtgactttgactaagaaattaaaacagttgtcaaaggctggg
gctcccctggagaacaccttgccttgcatgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_120814510_120815487
seq2: B6Ng01-219F14.g_67_1049

seq1  GAATTCTCTCTCTGAAAGCACAAACGTCCCTGAAGGGACCATCAGAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCTGAAAGCACAAACGTCCCTGAAGGGACCATCAGAGATG  50

seq1  CTGAGGAATATGCCCAAGGTTATCCTGCAAAGCCAGATTTCAAACTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAATATGCCCAAGGTTATCCTGCAAAGCCAGATTTCAAACTTCTC  100

seq1  TAAACTTCTAAATCTCCATTTTATAGTAAAACCCTAGAGTATTGGACTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTCTAAATCTCCATTTTATAGTAAAACCCTAGAGTATTGGACTGG  150

seq1  CTTGCTCCCGGCTATACAAGGATGAGAAACTTGGTCTCCTAACAGTACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCCCGGCTATACAAGGATGAGAAACTTGGTCTCCTAACAGTACAT  200

seq1  TTAGGCCCTTTTTTGCTCCACCAAAGCATGGTTTACATCGAGTTGGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCCCTTTTTTGCTCCACCAAAGCATGGTTTACATCGAGTTGGTAGC  250

seq1  TATAAGAACTTATGGAAATATGGAACTTAGCTTCCTCCTTGGAGCATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGAACTTATGGAAATATGGAACTTAGCTTCCTCCTTGGAGCATAGA  300

seq1  AGGGTTTGTGAGTAAGCAAAGATATCAGAGAATTTGAACTTTGTTTTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTGTGAGTAAGCAAAGATATCAGAGAATTTGAACTTTGTTTTCCT  350

seq1  ATGTGTATTTTCCTGGTGTCAAGTCGTGCCTGTTCCATCAATCCAAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATTTTCCTGGTGTCAAGTCGTGCCTGTTCCATCAATCCAAATGT  400

seq1  CTGTATGTGCCATTGCTGTTCCACAGTAAACAGTGGGGGCATAAAACAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGTGCCATTGCTGTTCCACAGTAAACAGTGGGGGCATAAAACAGC  450

seq1  TTTTGTTCCATGGGTTCAGGACAAGGGCATTGCTTGAAAAGATTCCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCCATGGGTTCAGGACAAGGGCATTGCTTGAAAAGATTCCTATT  500

seq1  GCTCATGTTCTTTTCTGGGCTCTTCAGACCCTTGAAACATGAGTGTGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGTTCTTTTCTGGGCTCTTCAGACCCTTGAAACATGAGTGTGGAC  550

seq1  AGAGGTTTAAAAAGGGAGACCTAAGAAATGTGTAAAGGTAAAGATGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTTAAAAAGGGAGACCTAAGAAATGTGTAAAGGTAAAGATGAAGT  600

seq1  CCGTTGTGTGCTCTGCCCCTAGAAGGGAGAAGAATCCTATTATGTGCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTGTGTGCTCTGCCCCTAGAAGGGAGAAGAATCCTATTATGTGCCCT  650

seq1  GCCACTGGACGGGGAATTTGAG-TTACTTGTT-GGAAG-TTTATGTCAGT  697
      |||||||||||||||||||||| |||||| || ||||| |||||||||||
seq2  GCCACTGGACGGGGAATTTGAGTTTACTTTTTGGGAAGTTTTATGTCAGT  700

seq1  TTGTTAAGCATAAGTGGACAGTCCCTGCTAACTTCTGAAGCATATGCAGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAGCATAAGTGGACAGTCCCTGCTAACTTCTGAAGCATATGCAGG  750

seq1  AACTACGTGAGAAGCGAACTCTTCAAAGCTGAGCTGCAGGCATTTACTTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACGTGAGAAGCGAACTCTTCAAAGCTGAGCTGCAGGCATTTACTTG  800

seq1  TTAAACAAGATTAGTTCTCAGAAGTGTCCATGAATAGTCATTTTCTCTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAAGATTAGTTCTCAGAAGTGTCCATGAATAGTCATTTTCTCTAA  850

seq1  GCACAGGAATCTAGAAATAATTAATAAA-TAATGTAGCTTGTGGAAATAT  896
      |||||||||||||||||||||||||||| ||||||||| |||||||||||
seq2  GCACAGGAATCTAGAAATAATTAATAAATTAATGTAGC-TGTGGAAATAT  899

seq1  TTACATTTTGTGACTTTGACTAAGAAATTAAAACAG-TGTCAAAGGCTGG  945
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTACATTTTGTGACTTTGACTAAGAAATTAAAACAGTTGTCAAAGGCTGG  949

seq1  GGCTCCCTGGAAGAACA-CTTGCCTCGCATGTTT  978
      |||||||  | |||||| ||||||| ||||||||
seq2  GGCTCCCCTGGAGAACACCTTGCCTTGCATGTTT  983