BAC Information

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BAC

Clone NameB6Ng01-219L08
Chromosome14 (Build37)
Map Location 113,883,973 - 113,885,150
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043509, Tpm3-rs7
Downstream geneLOC100043510, LOC382947, LOC668791, LOC100043821
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219L08.bB6Ng01-219L08.g
ACCGA035468GA035469
length1,1761,213
definitionB6Ng01-219L08.b B6Ng01-219L08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgtgatcatttctaaaaccttacaggtttgctaaagatgagg
ttcagaaaataaaacgggctgagcaattgcaagaggagctataatagaat
cagtaaattgttttatccataacttggctcagtacaaaggcaggttttct
ttttttctactaagcacttcaagtttctaatccattttaaataagttata
cctgaatgttaacagtataatggtataggaaccctattatagacaaatgc
ttctaaagggatcaagttctttttaacagattttataattattaatgcct
ggtttcttaattgacattttgattgccgtgttgggtcaatgttcttttct
catgatgcactgtggtctagagcacaattctgttttcttttaacactcag
atataatagacagctcagtattactccaccaaacattttttttccctaag
ggggaaaaaaaccattgagatatttgtcattttccctgtttctgctattg
ctacagtaataggaaaatcagaaaattctattgttgcaaaaatgtgagtc
caccaatatttataacccctttttttttccctaggattttcaaaaatcta
taactaaataggagagtcacgtgtcacaggcataccaactattgaaatac
taaatccattattaaaatgatgattcaaatcctagagtgtgcttaatttc
cagtaacataaaagttgagtctgtttctgtgtctttgtctctgtgtctgt
ctctctgtctctatctctgttgctctctccctctctctcttgaaaataat
tctctgaaaaaagaacagaagccaaattgcagctaaacaaatgtgttcgc
caaaaatgagtaggtatgatcagtctagataaacagatacatagaaagat
tcagaaacaaaagtggtttagaagaggatccttctcaaaatggataagtg
ccaaggaggttgttctcacaaattttactgaacgactatgcttcagtttg
ggctaattactgtgaccttcacattgacacaggatacattatggtgctgg
attctaatgtacacatacatgattattttctcaaagtgcagcaatatctt
ctgaaactataattgtacttatttcaaaagtttcttttaatacacctcca
tggtttttgctagttcaatttacatt

gaattcaatggtagaagtccaataagcaagttttcactgaaaaagacgca
aaatgtacaggattacttttttctcatttataatgcactcatgtccacaa
catctaaatattttcaaactattctggtatcgatatcaatatacacattg
aatgtgtgtatttggtgattgtactagcaattcacattgtactaaactca
gtatgcaactgatgcacaactggaatatcttgactttaatatggattttc
tgagaggtataataaaaatataaaaagtaaagtgtcatttcagaaatttc
agagtgttaacaatcatgaagcttgtctttcctatttcaacacaactaga
agctattattaaaattatttctcccggaccaaaaaaatagattgctgtct
tatttatttatttatttatttatttatttatttatttatttattttcaac
ttgacaggagttagaatcatctgagagggaaagtctttcctttctttcct
tttaatttaattatatttattttacttattcactttacatactgcccact
atcccactccaaggcaccccctcctacaatccttctcccctcccacatcc
ccttatcctctgagctggtagaggtccccatgagaatctcccccaccctg
acacttcaacctaggcacttaccctggcactgaggacagacaaggcaacg
cagctaaaagagcatatcctactgggcagtggtggcacacgcctttaatc
ccagcacttgggatgcagagggaagaggatttctgagttcgaggccagcc
tgttctacagagtgaattccaggacagccaggactatatagagaaaccct
caaaaaattaaaaattaaaaattaaaaaaaaaataaagagttagtcttta
ggtaagcctggtcaacatagaaagtcctaaactaccatccagggatacac
atcagactctgtcaaaaaaaaatgcatatcccatgtacaggcacaacttt
tgggatagcctcagctcagtttttcagacccactgaagtaagttgcaata
tctgctacatataatgggagcctaggtcaagcctgctaattctctgatgg
tatctcaagactctgaagctcaatgttccaggtagttgacattgtgtcat
ccgtcaggctcatattctctcatagagccccacggttcaactccattgtt
tttgactggtaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113883973_113885150
seq2: B6Ng01-219L08.b_46_1221

seq1  GAATTCAATGTGATCATTTCTAAAACCTTACAGGTTTGCTAAAGATGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTGATCATTTCTAAAACCTTACAGGTTTGCTAAAGATGAGG  50

seq1  TTCAGAAAATAAAACGGGCTGAGCAATTGCAAGAGGAGCTATAATAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAAATAAAACGGGCTGAGCAATTGCAAGAGGAGCTATAATAGAAT  100

seq1  CAGTAAATTGTTTTATCCATAACTTGGCTCAGTACAAAGGCAGGTTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATTGTTTTATCCATAACTTGGCTCAGTACAAAGGCAGGTTTTCT  150

seq1  TTTTTTCTACTAAGCACTTCAAGTTTCTAATCCATTTTAAATAAGTTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTACTAAGCACTTCAAGTTTCTAATCCATTTTAAATAAGTTATA  200

seq1  CCTGAATGTTAACAGTATAATGGTATAGGAACCCTATTATAGACAAATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATGTTAACAGTATAATGGTATAGGAACCCTATTATAGACAAATGC  250

seq1  TTCTAAAGGGATCAAGTTCTTTTTAACAGATTTTATAATTATTAATGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAGGGATCAAGTTCTTTTTAACAGATTTTATAATTATTAATGCCT  300

seq1  GGTTTCTTAATTGACATTTTGATTGCCGTGTTGGGTCAATGTTCTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTTAATTGACATTTTGATTGCCGTGTTGGGTCAATGTTCTTTTCT  350

seq1  CATGATGCACTGTGGTCTAGAGCACAATTCTGTTTTCTTTTAACACTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGCACTGTGGTCTAGAGCACAATTCTGTTTTCTTTTAACACTCAG  400

seq1  ATATAATAGACAGCTCAGTATTACTCCACCAAACATTTTTTTTCCCTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAGACAGCTCAGTATTACTCCACCAAACATTTTTTTTCCCTAAG  450

seq1  GGGGAAAAAAACCATTGAGATATTTGTCATTTTCCCTGTTTCTGCTATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAAAAACCATTGAGATATTTGTCATTTTCCCTGTTTCTGCTATTG  500

seq1  CTACAGTAATAGGAAAATCAGAAAATTCTATTGTTGCAAAAATGTGAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTAATAGGAAAATCAGAAAATTCTATTGTTGCAAAAATGTGAGTC  550

seq1  CACCAATATTTATAACCCCTTTTTTTTTCCCTAGGATTTTCAAAAATCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATATTTATAACCCCTTTTTTTTTCCCTAGGATTTTCAAAAATCTA  600

seq1  TAACTAAATAGGAGAGTCACGTGTCACAGGCATACCAACTATTGAAATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAATAGGAGAGTCACGTGTCACAGGCATACCAACTATTGAAATAC  650

seq1  TAAATCCATTATTAAAATGATGATTCAAATCCTAGAGTGTGCTTAATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCATTATTAAAATGATGATTCAAATCCTAGAGTGTGCTTAATTTC  700

seq1  CAGTAACATAAAAGTTGAGTCTGTTTCTGTGTCTTTGTCTCTGTGTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAACATAAAAGTTGAGTCTGTTTCTGTGTCTTTGTCTCTGTGTCTGT  750

seq1  CTCTCTGTCTCTATCTCTGTTGCTCTCTCCCTCTCTCTCTTGAAAATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTCTCTATCTCTGTTGCTCTCTCCCTCTCTCTCTTGAAAATAAT  800

seq1  TCTCTGAAAAAAGAACAGAAGCCAAATTGCAGCTAAACAAATGTGTTCGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAAAAAAGAACAGAAGCCAAATTGCAGCTAAACAAATGTGTTCGC  850

seq1  CAAAAATGAGTAGGTATGATCAGTCTAGATAAACAGATACATAGAAAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATGAGTAGGTATGATCAGTCTAGATAAACAGATACATAGAAAGAT  900

seq1  TCAGAAACAAAAGTGG-TTAGAAGAGGATCCTTCTCAAAAATGGATAAGT  949
      |||||||||||||||| ||||||||||||||||||| |||||||||||||
seq2  TCAGAAACAAAAGTGGTTTAGAAGAGGATCCTTCTC-AAAATGGATAAGT  949

seq1  GCCAAGGAGGTTGTTCTCACAAATTTTACTGAACGACTATGCTTCAGTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGAGGTTGTTCTCACAAATTTTACTGAACGACTATGCTTCAGTTT  999

seq1  GGGCTAATTACTGTGACCTTCACATTGACACAGGATACATAATGGTGCTG  1049
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGGCTAATTACTGTGACCTTCACATTGACACAGGATACATTATGGTGCTG  1049

seq1  GATTCTAATGTACACATACATGATTATTTTCTCAAAGTGCAGC-ATATCT  1098
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GATTCTAATGTACACATACATGATTATTTTCTCAAAGTGCAGCAATATCT  1099

seq1  TCTGAAACTATAA-TGTACCTTATTCAAAAAGTTTCTTTTATTAACACCT  1147
      ||||||||||||| |||| ||||||  |||||||||||||| | ||||||
seq2  TCTGAAACTATAATTGTA-CTTATTTCAAAAGTTTCTTTTAAT-ACACCT  1147

seq1  -CATGGGTTTTTTGCTATGTCAAATTTACATT  1178
       |||||  ||||||||| ||  ||||||||||
seq2  CCATGG--TTTTTGCTA-GTTCAATTTACATT  1176


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