BAC Information

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BAC

Clone NameB6Ng01-220E02
Chromosome14 (Build37)
Map Location 44,033,656 - 44,034,782
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik
Downstream geneLOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220E02.bB6Ng01-220E02.g
ACCGA035863GA035864
length1,1411,150
definitionB6Ng01-220E02.b B6Ng01-220E02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttttatagtgaggaattattctgtaatcctatggttcccatta
ccttttacagagaagaaaggggacagaagtaattgaagctcatgggtatt
taaaatctatactcaattaggttagggaggggagctgggaaactgataag
ataacaatcaataaagctagggtcaggaggccattcaggtgtgaatttat
atttctgagtgacttttctactcttttttataatttatttttattcattt
tctaatcagaattacaaatagggacaaaaccaacaaagaatgtttcatga
cacatgaagcaaaaataaaagcaactatatgaaacaccaggaaaaaatac
atataccacctatcaaagacaaaaaaacagatccccttaagatagaagga
acacagaagtcaaggaaattctggcatcccagtgcaaaatcaaggttgag
aaagaggggatgacccaaatctgctgaaagagatgtatgcctctaagaca
cactgtcacactcctgagaaagaaatgcgtatggtcaaattctcttagct
accagaatgacaggaatcttcgtctccaccagacatatttcagtgggcct
gtggttattccacatgactgaatcaagcatacacacaccacaggattgct
aagtactgccacttatgaaaaacatccataattgtttaaataacataatc
atctattctctacccatgagctgagtttcctaataatattttcaccacta
atcttcagctaaatcaactagggaatgtccccatgataaaacacacttga
cgtctgtctgtactgccaagctgtattaaatgcaaacgacataggcataa
tgtaagtatttatgttgctctgtatctgaattaaaaaaaaatgagaagag
cttctcgaagtaaaggaagagtaaaagtgtttcacctgaaggacattgtg
caagccaagaatttactgggaggaggcaaaatcctcttcatcatggtacc
tctttacatattcaatatacaattgaaattatatcaatattatttcatag
aacttttctactctttaacagaatactggcctgaaccttgcctaattatt
ccacgaagctgaccttccttaaccaccatgggcatttaagc
gaattcccacctggggatccattccatatacagacaccaaactcagacac
tatcaaagattgcaagaagtgtttgatgacaggagcctgctacagctgtc
tcctcagaagctctgcctgagactgatgaatacagagacagatgcttgca
gcaaacctttggaatgagcatagggtccccagttgaggagttagagaaag
gattgaaggagctaaatgggtttgcaacaattggaagaacaactacgtca
aacaaccagataccccagagctcacaggaactaaaccaccaatcaaagag
tacacatcgagcaacccaaggctctagctacatatgcagcagacaatagc
cttgtcagacattaatgggatgagaggctcttgttcctttgaaggctcaa
tgccccagtgtaggggaatgccagggcaaggagacagcagtgtttgtgtg
agtggggaactctcatagatgcagatggagggggcatgagataaaaggtt
ttgaaccggaaactaggaaacaggataaaatttaaagtgtaagcttaaaa
tattttaaaatagaaaaaaaaaaagagaattgaagacccagaaatttaac
cacacatatggacacatggtctttgacaaagaagccaaaaatatacaatg
gaaaaaagaaagcatcttcaataaattgtgctgatcctactggcagtaag
taggtatgtagaaaaatgaaagtagatccatatttgtcacgaggaataaa
actcaagtccaagtggatcaaacacttaacataaaaccagattcactgaa
tctaattgaagagaaattgagaaagagcttcaactcacaggaatatgggc
aaattttctaagtacgctccgatgactcaggttctaacatcaaaaactga
ataaatgggacctcatgaaactgaaaaacttatgtaggcaaaggcattag
ccagtagacaaattggtactacatatggaaaattttcactacctacatca
aatatctaagaacctcaatagctaacaccgaaaggaaaagaccagtcttg
aatgtcataggacctgtgaaaatccaacagaccttgaatgctgaaagact
agatggagtctagcttcaggaatgacaagcgcacctgaaatggtataagc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_44033656_44034782
seq2: B6Ng01-220E02.b_44_1184 (reverse)

seq1  GCTTAAATGCCC--TGTGGTTGAGGAATGTCAG-TTGGTGGAAATATTTA  47
      ||||||||||||   |||||| ||||| ||||| || |||| |||| |||
seq2  GCTTAAATGCCCATGGTGGTTAAGGAAGGTCAGCTTCGTGG-AATAATTA  49

seq1  GGCAAGTGTCA-GCCAGTATTCTGTT-AAGAGTAGAAAAGTCTTATTGAT  95
      ||||||  ||| |||||||||||||| ||||||||||||||  || ||| 
seq2  GGCAAGGTTCAGGCCAGTATTCTGTTAAAGAGTAGAAAAGTTCTA-TGAA  98

seq1  AT-ATATTTATATAATTTCAATGTTATTATGATTATGTAAAGAGGTA-CA  143
      || ||||| |||||||||||||  |||  ||| |||||||||||||| ||
seq2  ATAATATTGATATAATTTCAATTGTATATTGAATATGTAAAGAGGTACCA  148

seq1  TGATG-AGA-GATTTTGCCT-CTCCCAGTAAA-TCTTGGCTTGCACAATG  189
      ||||| ||| |||||||||| ||||||||||| |||||||||||||||||
seq2  TGATGAAGAGGATTTTGCCTCCTCCCAGTAAATTCTTGGCTTGCACAATG  198

seq1  T-CTTCAGGTG-AACACTTTTACTCTTCC-TTACTTCGAG-AGCTCTTCT  235
      | ||||||||| ||||||||||||||||| |||||||||| |||||||||
seq2  TCCTTCAGGTGAAACACTTTTACTCTTCCTTTACTTCGAGAAGCTCTTCT  248

seq1  CA-TTTTTTTTAATTCAGATACAGAGCAACATAAATACTTACATTATGCC  284
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTTTAATTCAGATACAGAGCAACATAAATACTTACATTATGCC  298

seq1  TATGTCGTTTGCATTTAATACAGCTTGGCAGTACAGACAGACGTCAAGTG  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCGTTTGCATTTAATACAGCTTGGCAGTACAGACAGACGTCAAGTG  348

seq1  TGTTTTATCATGGGGACATTCCCTAGTTGATTTAGCTGAAGATTAGTGGT  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATCATGGGGACATTCCCTAGTTGATTTAGCTGAAGATTAGTGGT  398

seq1  GAAAATATTATTAGGAAACTCAGCTCATGGGTAGAGAATAGATGATTATG  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATTATTAGGAAACTCAGCTCATGGGTAGAGAATAGATGATTATG  448

seq1  TTATTTAAACAATTATGGATGTTTTTCATAAGTGGCAGTACTTAGCAATC  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAAACAATTATGGATGTTTTTCATAAGTGGCAGTACTTAGCAATC  498

seq1  CTGTGGTGTGTGTATGCTTGATTCAGTCATGTGGAATAACCACAGGCCCA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTGTGTGTATGCTTGATTCAGTCATGTGGAATAACCACAGGCCCA  548

seq1  CTGAAATATGTCTGGTGGAGACGAAGATTCCTGTCATTCTGGTAGCTAAG  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATATGTCTGGTGGAGACGAAGATTCCTGTCATTCTGGTAGCTAAG  598

seq1  AGAATTTGACCATACGCATTTCTTTCTCAGGAGTGTGACAGTGTGTCTTA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTGACCATACGCATTTCTTTCTCAGGAGTGTGACAGTGTGTCTTA  648

seq1  GAGGCATACATCTCTTTCAGCAGATTTGGGTCATCCCCTCTTTCTCAACC  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATACATCTCTTTCAGCAGATTTGGGTCATCCCCTCTTTCTCAACC  698

seq1  TTGATTTTGCACTGGGATGCCAGAATTTCCTTGACTTCTGTGTTCCTTCT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTGCACTGGGATGCCAGAATTTCCTTGACTTCTGTGTTCCTTCT  748

seq1  ATCTTAAGGGGATCTGTTTTTTTGTCTTTGATAGGTGGTATATGTATTTT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAGGGGATCTGTTTTTTTGTCTTTGATAGGTGGTATATGTATTTT  798

seq1  TTCCTGGTGTTTCATATAGTTGCTTTTATTTTTGCTTCATGTGTCATGAA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGTGTTTCATATAGTTGCTTTTATTTTTGCTTCATGTGTCATGAA  848

seq1  ACATTCTTTGTTGGTTTTGTCCCTATTTGTAATTCTGATTAGAAAATGAA  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTTTGTTGGTTTTGTCCCTATTTGTAATTCTGATTAGAAAATGAA  898

seq1  TAAAAATAAATTATAAAAAAGAGTAGAAAAGTCACTCAGAAATATAAATT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAAATTATAAAAAAGAGTAGAAAAGTCACTCAGAAATATAAATT  948

seq1  CACACCTGAATGGCCTCCTGACCCTAGCTTTATTGATTGTTATCTTATCA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTGAATGGCCTCCTGACCCTAGCTTTATTGATTGTTATCTTATCA  998

seq1  GTTTCCCAGCTCCCCTCCCTAACCTAATTGAGTATAGATTTTAAATACCC  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCAGCTCCCCTCCCTAACCTAATTGAGTATAGATTTTAAATACCC  1048

seq1  ATGAGCTTCAATTACTTCTGTCCCCTTTCTTCTCTGTAAAAGGTAATGGG  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTTCAATTACTTCTGTCCCCTTTCTTCTCTGTAAAAGGTAATGGG  1098

seq1  AACCATAGGATTACAGAATAATTCCTCACTATAAAAAGAATTC  1127
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATAGGATTACAGAATAATTCCTCACTATAAAAAGAATTC  1141