BAC Information

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BAC

Clone NameB6Ng01-220F13
Chromosome14 (Build37)
Map Location 29,259,267 - 29,260,075
singlet/doubletsinglet
Overlap geneErc2
Upstream geneCcdc66, LOC665370, LOC100040206
Downstream geneWnt5a, LOC100040218, Cacna2d3, Lrtm1, Ppia-ps15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220F13.bB6Ng01-220F13.g
ACCGA035927GA035928
length696813
definitionB6Ng01-220F13.b B6Ng01-220F13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagcctgggagtactaacaggtcaaaagcctgtgcgtaggtaag
ccacaggccccgaagggagaacctattattcaattatagtattatcctga
aataaatacagtattaaacagagtagatttaaataaactcctaatagctt
atacccatagattaacacatgtcctaatcctcatcagagaagcttctttt
ttcagtgggtaataattaatatggagattcgcatctgatcaacatgcaga
gaataggagactggctgagtgctaagtcacacacatgcacattcatgcac
acacacagagactcccaagagtcaggggtcatcatagaagaaagctgaga
aagattctaagggcctggtccagtgttgactcaacaaagcagtgttttcc
aaacacaacagaccagttgcacatttgaattcacagcaactatgtcaaca
tacacaagacctttgcaaaagcaagccaggcaaagtcccaatatggagga
gggaaatggtcacaaagtccctatctgtcaagccattgataactgatgac
tgttgggagagaaaaagccagttttcctcgaggatttagatacccaagat
ccagagatgagttaatacccaggcatctaccagcaatactacataaacac
agtggtttggtttagtttggtgtggtttgatttggtttgatttggt

gaattcattagacacagtgggtccaagaagggggacgacagccagaagac
tggactcttgagttggtagaaaaacagcagaagctttaagcaaatgtatg
ttctagaaaatcagccctatggcccagcccaggagggatccctacgaaga
atctcctctgaggaccagaaaggaagggctaggtgatgttctaggtgcaa
gtcaaaaagaggagagaggaggtactggctacagtggaatctatgagaaa
gcttggctgaggaatcttggagcatccctctgcatatcaagtagagacat
ctggtctactctagggctccttgaagtatacacaaacttcagtgaaaaag
gtgacccaaaatgtctggcaatgagaaagatcaaaaggggaaatcatggc
aggggaagccttccggactcttcctttcccctggagaggacagtggcacc
accttcttggcaggtggaggtccttggaggaaattcagggctgcagaatt
tctgtatccctgttacagagttacatgttcaaaatgtgagaaacagaggg
agctggggatcctgatactataagtatctataactaaacactccattgct
gtggcaaacaaaggaagcagttttaaagcaggaagagttggtcttgatcc
acagcttcagaggtttctgtctggcatgggggtttggggggagagggtat
aatagagccgctcaacctaatggcaaccgggaaacagagagagcgagaat
gcatgtgctcactcattcctttcctgtccccctttattccctgcccttac
ccatgtctaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_29259267_29260075
seq2: B6Ng01-220F13.g_65_877

seq1  GAATTCATTAGACACAGTGGGTCCAAGAAGGGGGACGACAGCCAGAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGACACAGTGGGTCCAAGAAGGGGGACGACAGCCAGAAGAC  50

seq1  TGGACTCTTGAGTTGGTAGAAAAACAGCAGAAGCTTTAAGCAAATGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCTTGAGTTGGTAGAAAAACAGCAGAAGCTTTAAGCAAATGTATG  100

seq1  TTCTAGAAAATCAGCCCTATGGCCCAGCCCAGGAGGGATCCCTACGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAAAATCAGCCCTATGGCCCAGCCCAGGAGGGATCCCTACGAAGA  150

seq1  ATCTCCTCTGAGGACCAGAAAGGAAGGGCTAGGTGATGTTCTAGGTGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTCTGAGGACCAGAAAGGAAGGGCTAGGTGATGTTCTAGGTGCAA  200

seq1  GTCAAAAAGAGGAGAGAGGAGGTACTGGCTACAGTGGAATCTATGAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAAGAGGAGAGAGGAGGTACTGGCTACAGTGGAATCTATGAGAAA  250

seq1  GCTTGGCTGAGGAATCTTGGAGCATCCCTCTGCATATCAAGTAGAGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGCTGAGGAATCTTGGAGCATCCCTCTGCATATCAAGTAGAGACAT  300

seq1  CTGGTCTACTCTAGGGCTCCTTGAAGTATACACAAACTTCAGTGAAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTACTCTAGGGCTCCTTGAAGTATACACAAACTTCAGTGAAAAAG  350

seq1  GTGACCCAAAATGTCTGGCAATGAGAAAGATCAAAAGGGGAAATCATGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCAAAATGTCTGGCAATGAGAAAGATCAAAAGGGGAAATCATGGC  400

seq1  AGGGGAAGCCTTCCGGACTCTTCCTTTCCCCTGGAGAGGACAGTGGCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAGCCTTCCGGACTCTTCCTTTCCCCTGGAGAGGACAGTGGCACC  450

seq1  ACCTTCTTGGCAGGTGGAGGTCCTTGGAGGAAATTCAGGGCTGCAGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTGGCAGGTGGAGGTCCTTGGAGGAAATTCAGGGCTGCAGAATT  500

seq1  TCTGTATCCCTGTTACAGAGTTACATGTTCAAAATGTGAGAAACAGAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATCCCTGTTACAGAGTTACATGTTCAAAATGTGAGAAACAGAGGG  550

seq1  AGCTGGGGATCCTGATACTATAAGTATCTATAACTAAACACTCCATTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGGATCCTGATACTATAAGTATCTATAACTAAACACTCCATTGCT  600

seq1  GTGGCAAACAAAGGAAGCAGTTTTAAAGCAGGAAGAGTTGGTCTTGATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAAACAAAGGAAGCAGTTTTAAAGCAGGAAGAGTTGGTCTTGATCC  650

seq1  ACAGCTTCAGAGGTTTCTGTCTGGCATGGGGGTTTGGGGGGAGAGGGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTCAGAGGTTTCTGTCTGGCATGGGGGTTTGGGGGGAGAGGGTAT  700

seq1  AATAGAGCCGCTC-ACCTAATGGCAACCAGGAAACAGAGAGAGCGAGAAT  749
      ||||||||||||| |||||||||||||| |||||||||||||||||||||
seq2  AATAGAGCCGCTCAACCTAATGGCAACCGGGAAACAGAGAGAGCGAGAAT  750

seq1  GCATGTGCTCACTCATTC--TTTCTGTCCACTTTTATTCCATGCCCTTAC  797
      ||||||||||||||||||  || |||||| | |||||||| |||||||||
seq2  GCATGTGCTCACTCATTCCTTTCCTGTCCCCCTTTATTCCCTGCCCTTAC  800

seq1  CCA-GTCTAAGAG  809
      ||| |||||| ||
seq2  CCATGTCTAAAAG  813


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