BAC Information

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BAC

Clone NameB6Ng01-220K07
Chromosome14 (Build37)
Map Location 51,631,540 - 51,632,563
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10
Downstream geneRnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220K07.bB6Ng01-220K07.g
ACCGA036149GA036150
length1,0341,173
definitionB6Ng01-220K07.b B6Ng01-220K07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgtgtagctcagggctatccttgaattcaagatcttcctctc
ccagtgctgagatttacaagcactctggcttataaatcttggttgataca
aaaagcatgcaataaataatccaagtccgagccaggcagtggtagcgcac
acctttaatcccagcacttgggaggcagagacaggtggatttctgagttt
gaggacagcctggtctacagagtgagttccaggacagccagggctataca
gagtaaccatgtctcgaaaatccaaaccaagcaaacaaacaaaagaatcc
aagtcctcaaactttgtttaggcctggatcttgttcctttgaacacaaga
gagcaaactcagtgagcttcagacgagaacagcagcttccacaagggtat
agagctgcccctgggagttgggtggtcttggtgaggattgttcctgaggt
gttcatgtggtagaagcttaatcttcagggtagcagtgttgaagaacctt
taagaggtgaggacaggtgagaggcaattcgggcaccggagaggtgcttt
tcctgaaaatgtcactgctgttcatacagagacatttgttgttgtggatt
tggtttagtgtttgtatggtgttgagttcccaaaatttcaagagaatctg
catgtaagatgctgagggtccctgtcctagttggtttcaattggtaaata
aagttgccagcagctaatggttgggcagggagacagaggcaggactttag
gattcgcaggcaaagagaccaagagaggaaggagggtttagaattgtcat
gccaggaaagtaaaaagaccaggcctgaggggtgcagaagagagaggata
gtgaaaatgtgaaacataaaaacaaaaatttctaggcctgtaggcccagg
cttgagaatgtgaactttgtgactcaattgctccaaggtatgcttaatca
taaaactagatagcgacattcctgggttcaggggagtggttccatctaag
aaagtcattccttgacccaccctggaccgatagc
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgtggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagaggcagtgcgcagactcattcattcccagagaggaacaaa
ggaaaatacaaaaggcatatccttttctacttaaaactttaagtcagtgg
ggtttacagatagccacagaaaaggtccaaatttctgatacaggacaatt
cttgggctctgtggtgtccccagataagattgtgccccaaaaggtagaga
gaagaagagatcacctccataccttaaatgattttcaaaagctgttggga
gatattaattggctcagaccttttttaaagattccttccgctgagttaag
gcctttgtttggtattttagaaggagatcctcatatctcctcccctagga
ctcttactctagctgctaaccaggccttacaaaaggtggaaaaagcctta
cagaatgcacaattacaacgtattgaggattcgcagcctttcagtttgtg
tgtctttaagacagcacaattgccaaccgcagttttgtggcagaatgggc
cattgttgtggatccatccaaacgtatccccagctaaaataatagattgg
tatcctgatgcaattgcacagcttgcccttaaaggcctaaaagcagcaat
cacccactttggggcaaagtccatatcttttaattgtaccttataccgct
gcacaggttcaaaccttggcagccacatctaatgattgggcagttttagt
tacctcctttcaggaaaaatagataaccattatccaaaacatccaatctt
acagtttgcccaaaatcatctgttgttttccacaaataacagtaagaacc
cacttaaaatgggattggtggtatatactgatggatcaaaactggcatag
gtgctatggtggctatggttaagtggaatcaacaatatatggaaatcacc
tcaggtgctaaaagggtatgttcggagtcgaaccctttagaacccgtagt
ttgggtccagattcctggtatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_51631540_51632563
seq2: B6Ng01-220K07.b_45_1078 (reverse)

seq1  GCTATCG--TCAGGGTGGGTCA--GGATGACTTTCTTAGAATGAA-CACT  45
      |||||||   ||||||||||||  | ||||||||||||||  ||| ||||
seq2  GCTATCGGTCCAGGGTGGGTCAAGGAATGACTTTCTTAGATGGAACCACT  50

seq1  -CCCTGAACCCAGGAATGTCGCTATCT-GTTTTATGATT-AGCATACCTT  92
       |||||||||||||||||||||||||| ||||||||||| ||||||||||
seq2  CCCCTGAACCCAGGAATGTCGCTATCTAGTTTTATGATTAAGCATACCTT  100

seq1  GGAGC-ATTGAGTCACAAAGTTCACATTCTCAAGCCTGGGCCTACAGGCC  141
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAATTGAGTCACAAAGTTCACATTCTCAAGCCTGGGCCTACAGGCC  150

seq1  TAG-AATTTTTGTTTTTATGTTTCACATTTTCACTATCCTCTCTCTTCTG  190
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTTTTGTTTTTATGTTTCACATTTTCACTATCCTCTCTCTTCTG  200

seq1  CACCCCTCAGGCCTGGTCTTTTTACTTTCCTGGCATGACAATTCTAAACC  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTCAGGCCTGGTCTTTTTACTTTCCTGGCATGACAATTCTAAACC  250

seq1  CTCCTTCCTCTCTTGGTCTCTTTGCCTGCGAATCCTAAAGTCCTGCCTCT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCTCTCTTGGTCTCTTTGCCTGCGAATCCTAAAGTCCTGCCTCT  300

seq1  GTCTCCCTGCCCAACCATTAGCTGCTGGCAACTTTATTTACCAATTGAAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCTGCCCAACCATTAGCTGCTGGCAACTTTATTTACCAATTGAAA  350

seq1  CCAACTAGGACAGGGACCCTCAGCATCTTACATGCAGATTCTCTTGAAAT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTAGGACAGGGACCCTCAGCATCTTACATGCAGATTCTCTTGAAAT  400

seq1  TTTGGGAACTCAACACCATACAAACACTAAACCAAATCCACAACAACAAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAACTCAACACCATACAAACACTAAACCAAATCCACAACAACAAA  450

seq1  TGTCTCTGTATGAACAGCAGTGACATTTTCAGGAAAAGCACCTCTCCGGT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGTATGAACAGCAGTGACATTTTCAGGAAAAGCACCTCTCCGGT  500

seq1  GCCCGAATTGCCTCTCACCTGTCCTCACCTCTTAAAGGTTCTTCAACACT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGAATTGCCTCTCACCTGTCCTCACCTCTTAAAGGTTCTTCAACACT  550

seq1  GCTACCCTGAAGATTAAGCTTCTACCACATGAACACCTCAGGAACAATCC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCCTGAAGATTAAGCTTCTACCACATGAACACCTCAGGAACAATCC  600

seq1  TCACCAAGACCACCCAACTCCCAGGGGCAGCTCTATACCCTTGTGGAAGC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAAGACCACCCAACTCCCAGGGGCAGCTCTATACCCTTGTGGAAGC  650

seq1  TGCTGTTCTCGTCTGAAGCTCACTGAGTTTGCTCTCTTGTGTTCAAAGGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTCTCGTCTGAAGCTCACTGAGTTTGCTCTCTTGTGTTCAAAGGA  700

seq1  ACAAGATCCAGGCCTAAACAAAGTTTGAGGACTTGGATTCTTTTGTTTGT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATCCAGGCCTAAACAAAGTTTGAGGACTTGGATTCTTTTGTTTGT  750

seq1  TTGCTTGGTTTGGATTTTCGAGACATGGTTACTCTGTATAGCCCTGGCTG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGGTTTGGATTTTCGAGACATGGTTACTCTGTATAGCCCTGGCTG  800

seq1  TCCTGGAACTCACTCTGTAGACCAGGCTGTCCTCAAACTCAGAAATCCAC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACTCACTCTGTAGACCAGGCTGTCCTCAAACTCAGAAATCCAC  850

seq1  CTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCTACCACTGCC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCTACCACTGCC  900

seq1  TGGCTCGGACTTGGATTATTTATTGCATGCTTTTTGTATCAACCAAGATT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCGGACTTGGATTATTTATTGCATGCTTTTTGTATCAACCAAGATT  950

seq1  TATAAGCCAGAGTGCTTGTAAATCTCAGCACTGGGAGAGGAAGATCTTGA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCCAGAGTGCTTGTAAATCTCAGCACTGGGAGAGGAAGATCTTGA  1000

seq1  ATTCAAGGATAGCCCTGAGCTACACATAGAATTC  1024
      ||||||||||||||||||||||||||||||||||
seq2  ATTCAAGGATAGCCCTGAGCTACACATAGAATTC  1034