BAC Information

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BAC

Clone NameB6Ng01-220O18
Chromosome14 (Build37)
Map Location 49,097,529 - 49,098,638
singlet/doubletsinglet
Overlap gene6720456H20Rik
Upstream geneFbxo34, D14Ertd436e, EG625730, LOC100042787, Ktn1, 4930447J18Rik, Map1lc3-ps2, Peli2, EG624367, LOC100041831
Downstream gene4930572G02Rik, Otx2, LOC100041864, LOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220O18.bB6Ng01-220O18.g
ACCGA036359GA036360
length1,100326
definitionB6Ng01-220O18.b B6Ng01-220O18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgccagtggtctcacagatgttcctgaaatttattttctttctt
ttttttaagatttatgtatgcatttatttattaggtatacaatgttttcc
ctgcatgtatgtctgcacaccggaagagggcaccagatctcaatatagaa
ggttgtgagccaccatggggttgctgggaattgatctcaggacctcttaa
cctctgagccatctctccagtccagaaatttattttcttcaataacatag
agtacaagcctcattagaaagccccaacacagtgtctatattcccataac
tattgtccatttctcctttcttttatcctttactgcggttctatttatct
ccccgccagcactaccacaatgtctggaaagaaaggtctgttggatttct
taagcacggcatgtctaatttattgagcttacattttactgagcactgat
ggattttccatttaaaattaaacagtaacacagatactattcatcaagta
tgttgaggaaatcatggggctggagagaatggctcagtgcgtaagagagg
accacatggtgcttcacgactgactgcaactccggccccaggagattcaa
catcctcttctggtctccataagcagtgcacacatgatgcgcagatatat
gtgcaggtaaaacagccatgtacatacaaagaataattaaacttttaaaa
attgaaaaaaaaaaaaaaggaaatgttgtgtcaaatgtggggacacatgt
acagcctgcacccaggcagtgtagggacacatgtacaggctggcacccag
gcagtgtggggacacatgtacagcctgcacccaggcagtgtggggacaca
tgtacaggctggcacccaaggcagtgtggggacacatgtacagtctgcac
ccaggcagtgtagggacacatgtacaggctgggcacccaggcagtgtggg
gacacatgtacagcctgcactcaggcagtggtggggacacatgtacaggc
tgcaccaggcagtgtgcgacccatgtgcagctgcagccagaacgagcatg
aagatattagtggcataagcctatgctcaaggagcaggaatatgctggtg

cagcccgtgctgctactcagggccatgtatgagtccgtgaccatgtagca
gcaggggtcaggtatcaatgtttgtggctcttattgccactagtgaccat
agggatgccctggcctggacagctgactggggttacataaatgtccaagg
gctgtgtagaactggccctgcccctcactgactatggcacactggagagc
tggccccacctctcaccagcggcaacactgggagagtggaccctgtgtct
cacctgggccacagagaggagctggccctggttgtttgagggtggacgag
ccagcccaatgggggagggggagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_49097529_49098638
seq2: B6Ng01-220O18.b_47_1146 (reverse)

seq1  CAACAGCATACTCCTGCTTCCCTCTGAGCATAGGCTTATGCCCACCTTAT  50
      || ||||||| |||||||  ||| ||||||||||||||||||   || ||
seq2  CACCAGCATATTCCTGCT--CCT-TGAGCATAGGCTTATGCC--ACTAAT  45

seq1  ATCCTCATGCCTCCGTTTCCTGGCTGCAGGCTGCACATGTGTCCCCACAC  100
      ||| ||||||   ||||  ||||||||| |||||||||| || | |||||
seq2  ATCTTCATGC--TCGTT--CTGGCTGCA-GCTGCACATGGGT-CGCACAC  89

seq1  TGCCTGGGTGCCAGCCTGTACATGTGTCCCCA-CACTGCCTGGGTGCAGG  149
      ||||| |||| ||||||||||||||||||||| ||||||||| |||||||
seq2  TGCCT-GGTG-CAGCCTGTACATGTGTCCCCACCACTGCCTGAGTGCAGG  137

seq1  CTGTACATGTGTCCCCACACTGCCTGGGTG-CCAGCCTGTACATGTGTCC  198
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTGTACATGTGTCCCCACACTGCCTGGGTGCCCAGCCTGTACATGTGTCC  187

seq1  CTACACTGCCTGGGTGCAGACTGTACATGTGTCCCCACACTGCC-TGGGT  247
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTACACTGCCTGGGTGCAGACTGTACATGTGTCCCCACACTGCCTTGGGT  237

seq1  GCCAGCCTGTACATGTGTCCCCACACTGCCTGGGTGCAGGCTGTACATGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTGTACATGTGTCCCCACACTGCCTGGGTGCAGGCTGTACATGT  287

seq1  GTCCCCACACTGCCTGGGTGCCAGCCTGTACATGTGTCCCTACACTGCCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCACACTGCCTGGGTGCCAGCCTGTACATGTGTCCCTACACTGCCT  337

seq1  GGGTGCAGGCTGTACATGTGTCCCCACATTTGACACAACATTTCCTTTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCAGGCTGTACATGTGTCCCCACATTTGACACAACATTTCCTTTTT  387

seq1  TTTTTTTTTCAATTTTTAAAAGTTTAATTATTCTTTGTATGTACATGGCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCAATTTTTAAAAGTTTAATTATTCTTTGTATGTACATGGCT  437

seq1  GTTTTACCTGCACATATATCTGCGCATCATGTGTGCACTGCTTATGGAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACCTGCACATATATCTGCGCATCATGTGTGCACTGCTTATGGAGA  487

seq1  CCAGAAGAGGATGTTGAATCTCCTGGGGCCGGAGTTGCAGTCAGTCGTGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGAGGATGTTGAATCTCCTGGGGCCGGAGTTGCAGTCAGTCGTGA  537

seq1  AGCACCATGTGGTCCTCTCTTACGCACTGAGCCATTCTCTCCAGCCCCAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCATGTGGTCCTCTCTTACGCACTGAGCCATTCTCTCCAGCCCCAT  587

seq1  GATTTCCTCAACATACTTGATGAATAGTATCTGTGTTACTGTTTAATTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCTCAACATACTTGATGAATAGTATCTGTGTTACTGTTTAATTTT  637

seq1  AAATGGAAAATCCATCAGTGCTCAGTAAAATGTAAGCTCAATAAATTAGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAAAATCCATCAGTGCTCAGTAAAATGTAAGCTCAATAAATTAGA  687

seq1  CATGCCGTGCTTAAGAAATCCAACAGACCTTTCTTTCCAGACATTGTGGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCGTGCTTAAGAAATCCAACAGACCTTTCTTTCCAGACATTGTGGT  737

seq1  AGTGCTGGCGGGGAGATAAATAGAACCGCAGTAAAGGATAAAAGAAAGGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGCGGGGAGATAAATAGAACCGCAGTAAAGGATAAAAGAAAGGA  787

seq1  GAAATGGACAATAGTTATGGGAATATAGACACTGTGTTGGGGCTTTCTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGACAATAGTTATGGGAATATAGACACTGTGTTGGGGCTTTCTAA  837

seq1  TGAGGCTTGTACTCTATGTTATTGAAGAAAATAAATTTCTGGACTGGAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTTGTACTCTATGTTATTGAAGAAAATAAATTTCTGGACTGGAGA  887

seq1  GATGGCTCAGAGGTTAAGAGGTCCTGAGATCAATTCCCAGCAACCCCATG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCAGAGGTTAAGAGGTCCTGAGATCAATTCCCAGCAACCCCATG  937

seq1  GTGGCTCACAACCTTCTATATTGAGATCTGGTGCCCTCTTCCGGTGTGCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCACAACCTTCTATATTGAGATCTGGTGCCCTCTTCCGGTGTGCA  987

seq1  GACATACATGCAGGGAAAACATTGTATACCTAATAAATAAATGCATACAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACATGCAGGGAAAACATTGTATACCTAATAAATAAATGCATACAT  1037

seq1  AAATCTTAAAAAAAAGAAAGAAAATAAATTTCAGGAACATCTGTGAGACC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTAAAAAAAAGAAAGAAAATAAATTTCAGGAACATCTGTGAGACC  1087

seq1  ACTGGCAGAATTC  1110
      |||||||||||||
seq2  ACTGGCAGAATTC  1100