BAC Information

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BAC

Clone NameB6Ng01-221P11
Chromosome14 (Build37)
Map Location 82,757,289 - 82,758,417
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221P11.bB6Ng01-221P11.g
ACCGA037115GA037116
length1,1171,126
definitionB6Ng01-221P11.b B6Ng01-221P11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggatatggcagtctctagatggtccatcctttagtctcagct
ccaagctgtgtctctgtaactccttcgatgggtgttttgttctccattct
aagaaggggcaaagtgtccatactttggtcttcgttcttcttgagtttca
tgtgtttagcaaattgtaacttatatcttgggtattctaagtttctgggc
taatatccacttatcagtgagtacatatcatgtgagttcttttgtgattt
gctctctatctgtccacattctgtaacactaacactgcctatactgtgac
aatgacacaggccacacactgtaactatgatgctgtcagcacactgtgac
acagacactgtccacacactgtgacattgtcctcacactgtgacatggcc
aacacactgtcacactgacaatattcatgtgcttgtaatgtataatgccc
ttatttttgtgtgttgcttttcctctctttttgttcacagtgtatttaca
aagccaattcatttctcctgtgtactgttattttattttcatacttttca
ctcagtacatttctgatttcattcttaatttagatgttttattcctttca
aaaatttaagggtatttatatatagtattctggtatcttcatggtttagt
tttgtgaatttagattgataatttattctacattaatagcgtaaatagtc
tgaatctttattatagtaaatataaccgttcaaaatagcaaattgtttat
gtatctctcacaatgttgaatacccaatgtatacagatgttcttatagct
tacaatgactctggtcctttgcaatctgtgccattgttctgacgatatgt
tgtgtacctagcataacttagtttcagtgaaattctacaattaggaagag
atttatactccatatctcttagtcttccctcaataatttttttttccatt
tttttattagtatttaacacatttacattttccatgctatacaaagtccc
ccatatccactcacccccactccctgccaccactccccctttttgccctg
aatcccctgactggggcatataaggtggcagtcaatcggtctctctttcc
agtgaatgcgactaggc

gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
acatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcatatatccagaagata
ccccaactggtaagaaggacacatgctccactatgttcatagcagcctta
tttataatagccagaagctggaaataacccagatgcccctcaacagagga
atggatacagaaaatgtggtacatctacacaatggagtactactcagcta
ttaaaaagaatgaatttatgaaattcctaggcaaatggatggacctggag
ggcatcatcctgagtgaggtaacacattcacaaaggaactcacacaatat
gtactcactgataagtggatattagcccaaaacctaggatacccaagata
taagatacaatttcctaaacacatgaaactcaagaaaaatgaagactgaa
gtgtggacactatgcccctccttagaagtgggaacaaaacacccttggaa
ggagttacagagacaaagtttggagctgagatgaaaggatggtccatgta
gagactgccatatccagggatccaccccataatcagcatccaaacgctga
caccattgcatacactagcaagattttatcaaaaggacccagatgtagct
gtttcttgtgagatttatgccggggcctagcaaacacagaagtggatgct
cacagtcagctaatggagggatcacagggctccagtggatgagctagaga
agtacccaaggagctaaagggatctgcaaccctatagcggaacacataat
gaactaaccagtatccgagctcttgactctagctgcatatgtattcaaag
atgctttagtcgcatcacttgaagagagccatgggaaccgctaactttat
atgcccaagtaccagggcatatccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82757289_82758417
seq2: B6Ng01-221P11.b_44_1160

seq1  GAATTCCAGGATATGGCAGTCTCTAGATGGTCCATCCTTTAGTCTCAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATATGGCAGTCTCTAGATGGTCCATCCTTTAGTCTCAGCT  50

seq1  CCAAGCTGTGTCTCTGTAACTCCTTCGATGGGTGTTTTGTTCTCCATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTGTGTCTCTGTAACTCCTTCGATGGGTGTTTTGTTCTCCATTCT  100

seq1  AAGAAGGGGCAAAGTGTCCATACTTTGGTCTTCGTTCTTCTTGAGTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGGGCAAAGTGTCCATACTTTGGTCTTCGTTCTTCTTGAGTTTCA  150

seq1  TGTGTTTAGCAAATTGTAACTTATATCTTGGGTATTCTAAGTTTCTGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTAGCAAATTGTAACTTATATCTTGGGTATTCTAAGTTTCTGGGC  200

seq1  TAATATCCACTTATCAGTGAGTACATATCATGTGAGTTCTTTTGTGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCCACTTATCAGTGAGTACATATCATGTGAGTTCTTTTGTGATTT  250

seq1  GCTCTCTATCTGTCCACATTCTGTAACACTAACACTGCCTATACTGTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTATCTGTCCACATTCTGTAACACTAACACTGCCTATACTGTGAC  300

seq1  AATGACACAGGCCACACACTGTAACTATGATGCTGTCAGCACACTGTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACACAGGCCACACACTGTAACTATGATGCTGTCAGCACACTGTGAC  350

seq1  ACAGACACTGTCCACACACTGTGACATTGTCCTCACACTGTGACATGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACACTGTCCACACACTGTGACATTGTCCTCACACTGTGACATGGCC  400

seq1  AACACACTGTCACACTGACAATATTCATGTGCTTGTAATGTATAATGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACTGTCACACTGACAATATTCATGTGCTTGTAATGTATAATGCCC  450

seq1  TTATTTTTGTGTGTTGCTTTTCCTCTCTTTTTGTTCACAGTGTATTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTGTGTGTTGCTTTTCCTCTCTTTTTGTTCACAGTGTATTTACA  500

seq1  AAGCCAATTCATTTCTCCTGTGTACTGTTATTTTATTTTCATACTTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAATTCATTTCTCCTGTGTACTGTTATTTTATTTTCATACTTTTCA  550

seq1  CTCAGTACATTTCTGATTTCATTCTTAATTTAGATGTTTTATTCCTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTACATTTCTGATTTCATTCTTAATTTAGATGTTTTATTCCTTTCA  600

seq1  AAAATTTAAGGGTATTTATATATAGTATTCTGGTATCTTCATGGTTTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTAAGGGTATTTATATATAGTATTCTGGTATCTTCATGGTTTAGT  650

seq1  TTTGTGAATTTAGATTGATAATTTATTCTACATTAATAGCGTAAATAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAATTTAGATTGATAATTTATTCTACATTAATAGCGTAAATAGTC  700

seq1  TGAATCTTTATTATAGTAAATATAACCGTTCAAAATAGCAAATTGTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTTTATTATAGTAAATATAACCGTTCAAAATAGCAAATTGTTTAT  750

seq1  GTATCTCTCACAATGTTGAATACCCAATGTATACAGATGTTCTTATAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTCTCACAATGTTGAATACCCAATGTATACAGATGTTCTTATAGCT  800

seq1  TACAATGACTCTGGTCCTTTGCAATCTGTGCCATTGTTCTGACGATATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGACTCTGGTCCTTTGCAATCTGTGCCATTGTTCTGACGATATGT  850

seq1  TGTGTACCTAGCATAACTTAGTTTCAGTGAAATTCTACAATTAGGAAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACCTAGCATAACTTAGTTTCAGTGAAATTCTACAATTAGGAAGAG  900

seq1  ATTTATACTCCATATCTCTTAGTCTT-CCTCAATAATTTTTTTTTCCA-T  948
      |||||||||||||||||||||||||| ||||||||||||||||||||| |
seq2  ATTTATACTCCATATCTCTTAGTCTTCCCTCAATAATTTTTTTTTCCATT  950

seq1  TTTTTATTAGGTATTTAACACATTTACATTTCCAATGCTATACCAAAAGT  998
      ||||||||| ||||||||||||||||||||| | |||||||||  |||||
seq2  TTTTTATTA-GTATTTAACACATTTACATTTTCCATGCTATAC--AAAGT  997

seq1  CCCCCATATCCACCCACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTT  1048
      ||||||||||||| |||||||||| |||||||   |||||||||||||||
seq2  CCCCCATATCCACTCACCCCCACT-CCCTGCC--ACCACTCCCCCTTTTT  1044

seq1  GGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATG  1098
       ||||||  | ||||||| |||||||||||||| |  ||  ||| |||| 
seq2  -GCCCTG--AATCCCCTG-ACTGGGGCATATAAGG--TGGCAGT-CAATC  1087

seq1  GGCCTCTCTTTCCAGTGATGGCCGACTAGGC  1129
      || |||||||||||||||  | |||||||||
seq2  GGTCTCTCTTTCCAGTGAATG-CGACTAGGC  1117


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