BAC Information

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BAC

Clone NameB6Ng01-222C15
Chromosome14 (Build37)
Map Location 69,854,039 - 69,997,231
singlet/doubletdoublet
Overlap geneSlc25a37, D930020E02Rik, Entpd4
Upstream geneAdam7, Adamdec1, Adam28, LOC641033, LOC100043082, Stc1, EG545808, Nkx2-6, Nkx3-1
Downstream geneLoxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d, Phyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222C15.bB6Ng01-222C15.g
ACCGA037260GA037261
length616568
definitionB6Ng01-222C15.b B6Ng01-222C15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,996,616 - 69,997,231)(69,854,039 - 69,854,612)
sequence
gaattcccaatccatttcctgactctcttgctctctggcttaagctccct
agcatgccttatattgtgttctgatttctttcttactagaaggtaagctc
cgccaggccccagttttctttcttttaatcttctctttctcctcactgtt
atttcaagtacccagcacccagtctgtgtgttgaatgagtaaatggactt
ttttgatgtctctgactcttactactgtctcttaggtcctcaggacagtc
agaaagctttcccttcttaaaccaagtccaaaagcaatactaacaaaact
aaatgtatgtcttactgcattagaattaaaaactatccataaaactgagc
ctcaagaaagtggagctaaaaaaagggagataatacttgttaagaagcat
aagccaaaaggacgaaagccaagtgttcagaagttccgacccacatacct
gaaagaacaacttaaggaagaaatgattcattttgactcaaggttttaga
aagtttaatcatggttggttcgctctgtggctatggtgaagcttaaaatc
atagtgtgagggagattagaaagagaaggctgcccatatttggggggaga
gggagagggagaggga
catctggtgcaacagatgcagaaacagaaaggatgaggggtggggtgggt
ttggaggagtttcctgactgagctgtaaaagatgaggtgtttgtcttcag
cattaatgaaaatcagataccaccttgtggccagaagtagaaattcagga
ttgagtggggaagcaaatataaaattgcattccataagctacatgttcta
accagcccagtgagaacagtgtatagccacattaaaacctcaaagatggg
ccacaccattcgtctgccatggggtgaagtaggtgtgggagagttgctct
ccccgcttactacctgctgcagtctggagagctagctccgggatcatgag
agcaggagaattggttctgtccctcatcagctgcatcacttgggcaagca
ggccctgcacctcacctgggcagcacagtggagctggccatgctggtggg
agggtgtgcatcctgagggcacaggatagggagagctgttcctgcctctt
gctggctgcagcattgggtaattagcatggtcattgctggagagctcacc
ctggttacatggggtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_69996616_69997231
seq2: B6Ng01-222C15.b_48_663 (reverse)

seq1  TCCCTCTCCCTCTCCCTCTCCCCCCAAATATGGGCAGCCTTCTCTTTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCCCTCTCCCTCTCCCCCCAAATATGGGCAGCCTTCTCTTTCTA  50

seq1  ATCTCCCTCACACTATGATTTTAAGCTTCACCATAGCCACAGAGCGAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCCTCACACTATGATTTTAAGCTTCACCATAGCCACAGAGCGAACC  100

seq1  AACCATGATTAAACTTTCTAAAACCTTGAGTCAAAATGAATCATTTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGATTAAACTTTCTAAAACCTTGAGTCAAAATGAATCATTTCTTC  150

seq1  CTTAAGTTGTTCTTTCAGGTATGTGGGTCGGAACTTCTGAACACTTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTTGTTCTTTCAGGTATGTGGGTCGGAACTTCTGAACACTTGGCT  200

seq1  TTCGTCCTTTTGGCTTATGCTTCTTAACAAGTATTATCTCCCTTTTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTCCTTTTGGCTTATGCTTCTTAACAAGTATTATCTCCCTTTTTTTA  250

seq1  GCTCCACTTTCTTGAGGCTCAGTTTTATGGATAGTTTTTAATTCTAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACTTTCTTGAGGCTCAGTTTTATGGATAGTTTTTAATTCTAATGC  300

seq1  AGTAAGACATACATTTAGTTTTGTTAGTATTGCTTTTGGACTTGGTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGACATACATTTAGTTTTGTTAGTATTGCTTTTGGACTTGGTTTAA  350

seq1  GAAGGGAAAGCTTTCTGACTGTCCTGAGGACCTAAGAGACAGTAGTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAAAGCTTTCTGACTGTCCTGAGGACCTAAGAGACAGTAGTAAGA  400

seq1  GTCAGAGACATCAAAAAAGTCCATTTACTCATTCAACACACAGACTGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGACATCAAAAAAGTCCATTTACTCATTCAACACACAGACTGGGT  450

seq1  GCTGGGTACTTGAAATAACAGTGAGGAGAAAGAGAAGATTAAAAGAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTACTTGAAATAACAGTGAGGAGAAAGAGAAGATTAAAAGAAAGA  500

seq1  AAACTGGGGCCTGGCGGAGCTTACCTTCTAGTAAGAAAGAAATCAGAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGGGCCTGGCGGAGCTTACCTTCTAGTAAGAAAGAAATCAGAACA  550

seq1  CAATATAAGGCATGCTAGGGAGCTTAAGCCAGAGAGCAAGAGAGTCAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAAGGCATGCTAGGGAGCTTAAGCCAGAGAGCAAGAGAGTCAGGA  600

seq1  AATGGATTGGGAATTC  616
      ||||||||||||||||
seq2  AATGGATTGGGAATTC  616

seq1: chr14_69854039_69854612
seq2: B6Ng01-222C15.g_67_640

seq1  GAATTCCATCTGGTGCAACAGATGCAGAAACAGAAAGGATGAGGGGTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTGGTGCAACAGATGCAGAAACAGAAAGGATGAGGGGTGGG  50

seq1  GTGGGTTTGGAGGAGTTTCCTGACTGAGCTGTAAAAGATGAGGTGTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTTGGAGGAGTTTCCTGACTGAGCTGTAAAAGATGAGGTGTTTGT  100

seq1  CTTCAGCATTAATGAAAATCAGATACCACCTTGTGGCCAGAAGTAGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCATTAATGAAAATCAGATACCACCTTGTGGCCAGAAGTAGAAAT  150

seq1  TCAGGATTGAGTGGGGAAGCAAATATAAAATTGCATTCCATAAGCTACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATTGAGTGGGGAAGCAAATATAAAATTGCATTCCATAAGCTACAT  200

seq1  GTTCTAACCAGCCCAGTGAGAACAGTGTATAGCCACATTAAAACCTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAACCAGCCCAGTGAGAACAGTGTATAGCCACATTAAAACCTCAAA  250

seq1  GATGGGCCACACCATTCGTCTGCCATGGGGTGAAGTAGGTGTGGGAGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGCCACACCATTCGTCTGCCATGGGGTGAAGTAGGTGTGGGAGAGT  300

seq1  TGCTCTCCCCGCTTACTACCTGCTGCAGTCTGGAGAGCTAGCTCCGGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCCCCGCTTACTACCTGCTGCAGTCTGGAGAGCTAGCTCCGGGAT  350

seq1  CATGAGAGCAGGAGAATTGGCTCTGTCCCTCATCAGCTGCAGCACTTGGG  400
      |||||||||||||||||||| |||||||||||||||||||| ||||||||
seq2  CATGAGAGCAGGAGAATTGGTTCTGTCCCTCATCAGCTGCATCACTTGGG  400

seq1  CAAGCAGGCCCTGCACCTCACCTGGGCAGCACAGTGGAGCTGGCCATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGGCCCTGCACCTCACCTGGGCAGCACAGTGGAGCTGGCCATGCT  450

seq1  GGTGGGAGGGTGAGCAGCCTGAGGGCACAGGAGAGGGAGAGCTGTTCCTG  500
      |||||||||||| ||| ||||||||||||||| |||||||||||||||||
seq2  GGTGGGAGGGTGTGCATCCTGAGGGCACAGGATAGGGAGAGCTGTTCCTG  500

seq1  CCCCTTGCTGGCTGCAGCATTGGGTAAGCTAGCATGGGCAGTGCTGGAGA  550
      || ||||||||||||||||||||||||  |||||||| || |||||||||
seq2  CCTCTTGCTGGCTGCAGCATTGGGTAA-TTAGCATGGTCATTGCTGGAGA  549

seq1  GCTCACCCTGGTTACAT-GGGTGTG  574
      ||||||||||||||||| |||||||
seq2  GCTCACCCTGGTTACATGGGGTGTG  574