MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-223A01
Chromosome	14 (Build37)
Map Location	58,710,276 - 58,862,881
singlet/doublet	doublet
Overlap gene	Fgf9
Upstream gene	Gjb2, LOC100043515, Gjb6, LOC668140, Cryl1, LOC668090, AU040096, Ift88, Il17d, N6amt2, Xpo4, Lats2, Sap18, F630043A04Rik, Mrp63, Zdhhc20, Efha1, LOC668160, LOC100043554
Downstream gene	EG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gjb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14619 MGI:95720
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043515 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043515
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Gjb6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14623 MGI:107588
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC668140 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Cryl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68631 MGI:1915881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668090 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668090
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 59 ESTs, 6 Proteins pseudo : _no_value

name	AU040096 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105611 MGI:2145750
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 1 Protein

name	Ift88 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21821 MGI:98715
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il17d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239114 MGI:2446510
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	N6amt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68043 MGI:1915293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Xpo4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57258 MGI:1888526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lats2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50523 MGI:1354386
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sap18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20220 MGI:1277978
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F630043A04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219114 MGI:3041235
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrp63 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67840 MGI:1915090
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zdhhc20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75965 MGI:1923215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Efha1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68514 MGI:1915764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668160 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins pseudo : _no_value

name	Fgf9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14180 MGI:104723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043554 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs

name	EG668177 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668177 MGI:3643783
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 21 Proteins pseudo : _no_value

name	EG668182 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668182 MGI:3646682
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 725 ESTs, 11 Proteins

name	1700129C05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67932 MGI:1915182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG380907 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380907 MGI:3647352
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rcbtb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71330 MGI:1918580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gjb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542892 GeneID:14619 MGI:95720
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gap junction membrane channel protein beta 2 transcript_id : NM_008125.2

name	LOC100043515 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265756 GeneID:100043515
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043515 transcript_id : XM_001480243.1

name	Gjb6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58331125 GeneID:14623 MGI:107588
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gap junction membrane channel protein beta 6 transcript_id : NM_001010937.1

name	Gjb6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476099 GeneID:14623 MGI:107588
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gap junction membrane channel protein beta 6 transcript_id : NM_008128.3

name	Cryl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892190 GeneID:68631 MGI:1915881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, lambda 1 transcript_id : NM_030004.3

name	AU040096 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265759 GeneID:105611 MGI:2145750
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 1 Protein product : expressed sequence AU040096 transcript_id : XM_001480259.1

name	Ift88 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678332 GeneID:21821 MGI:98715
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : intraflagellar transport 88 homolog (Chlamydomonas) transcript_id : NM_009376.1

name	Il17d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365726 GeneID:239114 MGI:2446510
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 17D transcript_id : NM_145837.2

name	N6amt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802144 GeneID:68043 MGI:1915293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-6 adenine-specific DNA methyltransferase 2 (putative) transcript_id : NM_026526.2

name	Xpo4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10048437 GeneID:57258 MGI:1888526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exportin 4 transcript_id : NM_020506.1

name	Lats2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68448548 GeneID:50523 MGI:1354386
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : large tumor suppressor 2 transcript_id : NM_015771.2

name	Sap18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892423 GeneID:20220 MGI:1277978
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Sin3-associated polypeptide 18 transcript_id : NM_009119.2

name	F630043A04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354600 GeneID:219114 MGI:3041235
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA F630043A04 gene transcript_id : NM_198605.2

name	Mrp63 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803571 GeneID:67840 MGI:1915090
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein 63 transcript_id : NM_026401.2

name	Zdhhc20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85719323 GeneID:75965 MGI:1923215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC domain containing 20 transcript_id : NM_029492.4

name	Efha1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802390 GeneID:68514 MGI:1915764
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EF hand domain family A1 transcript_id : NM_028643.2

name	Fgf9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371104 GeneID:14180 MGI:104723
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor 9 transcript_id : NM_013518.3

name	LOC100043554 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265763 GeneID:100043554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs product : hypothetical protein LOC100043554 transcript_id : XM_001480314.1

name	EG668182 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265765 GeneID:668182 MGI:3646682
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 725 ESTs, 11 Proteins product : predicted gene, EG668182 transcript_id : XM_994790.2

name	EG380907 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363123 GeneID:380907 MGI:3647352
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG380907 transcript_id : NM_001004158.2

name	Rcbtb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037240 GeneID:71330 MGI:1918580
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 transcript_id : NM_027764.1

name	Gjb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680011 CCDS:CCDS27153.1 GeneID:14619 MGI:95720
definition	GO_component : GO:0005922 - connexon complex [Evidence IEA]; GO:0005921 - gap junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015285 - connexon channel activity [Evidence IEA]; GO:0005243 - gap-junction forming channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007154 - cell communication [Evidence IEA]; GO:0007267 - cell-cell signaling [Evidence IEA] codon_start : 1 note : connexin 26 product : gap junction membrane channel protein beta 2 protein_id : NP_032151.1

name	LOC100043515 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265757 GeneID:100043515
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480293.1

name	Gjb6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58331126 CCDS:CCDS27154.1 GeneID:14623 MGI:107588
definition	GO_component : GO:0005922 - connexon complex [Evidence IEA]; GO:0005921 - gap junction [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015285 - connexon channel activity [Evidence IEA]; GO:0005243 - gap-junction forming channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007154 - cell communication [Evidence IEA]; GO:0007267 - cell-cell signaling [Evidence IEA]; GO:0042471 - ear morphogenesis [Evidence IMP]; GO:0007605 - sensory perception of sound [Evidence IMP] codon_start : 1 note : connexin 30; gap junction beta-6 protein product : gap junction membrane channel protein beta 6 protein_id : NP_001010937.1

name	Gjb6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680017 CCDS:CCDS27154.1 GeneID:14623 MGI:107588
definition	GO_component : GO:0005922 - connexon complex [Evidence IEA]; GO:0005921 - gap junction [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015285 - connexon channel activity [Evidence IEA]; GO:0005243 - gap-junction forming channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007154 - cell communication [Evidence IEA]; GO:0007267 - cell-cell signaling [Evidence IEA]; GO:0042471 - ear morphogenesis [Evidence IMP]; GO:0007605 - sensory perception of sound [Evidence IMP] codon_start : 1 note : connexin 30; gap junction beta-6 protein product : gap junction membrane channel protein beta 6 protein_id : NP_032154.1

name	Cryl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19525729 CCDS:CCDS27155.1 GeneID:68631 MGI:1915881
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA] codon_start : 1 note : crystallin, lamda 1 product : crystallin, lambda 1 protein_id : NP_084280.2

name	AU040096 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265760 GeneID:105611 MGI:2145750
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480309.1

name	Ift88 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678333 GeneID:21821 MGI:98715
definition	GO_component : GO:0005930 - axoneme [Evidence IDA]; GO:0005932 - basal body [Evidence IDA]; GO:0019861 - flagellum [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP]; GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0042733 - embryonic digit morphogenesis [Evidence IGI] [Evidence IMP]; GO:0048598 - embryonic morphogenesis [Evidence IGI]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0045862 - positive regulation of proteolysis [Evidence IMP]; GO:0042487 - regulation of odontogenesis (sensu Vertebrata) [Evidence IMP]; GO:0007224 - smoothened signaling pathway [Evidence IGI] [Evidence IMP] codon_start : 1 exception : mismatches in translation note : Oak Ridge polycystic kidneys; transgene insert site 737, insertional mutation, polycystic kidney disease; tetratricopeptide repeat domain 10 product : Tg737 protein protein_id : NP_033402.1

name	Il17d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22003886 GeneID:239114 MGI:2446510
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006954 - inflammatory response [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : interleukin 27A product : interleukin 17D protein_id : NP_665836.1

name	N6amt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386022 CCDS:CCDS27157.1 GeneID:68043 MGI:1915293
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA] codon_start : 1 note : Gt(Ayu21)96Imeg product : N-6 adenine-specific DNA methyltransferase 2 (putative) protein_id : NP_080802.1

name	Xpo4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10048438 GeneID:57258 MGI:1888526
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : exportin 4 protein_id : NP_065252.1

name	Lats2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68448549 CCDS:CCDS27158.1 GeneID:50523 MGI:1354386
definition	GO_component : GO:0000922 - spindle pole [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence ISS] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016730 - oxidoreductase activity, acting on iron-sulfur proteins as donors [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0006118 - electron transport [Evidence IEA]; GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IDA]; GO:0009755 - hormone-mediated signaling [Evidence ISS]; GO:0007067 - mitosis [Evidence IEA]; GO:0045736 - negative regulation of cyclin-dependent protein kinase activity [Evidence ISS]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] [Evidence ISS]; GO:0007243 - protein kinase cascade [Evidence ISS] codon_start : 1 product : large tumor suppressor 2 protein_id : NP_056586.2

name	Sap18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677847 CCDS:CCDS27159.1 GeneID:20220 MGI:1277978
definition	GO_component : GO:0000118 - histone deacetylase complex [Evidence ISS]; GO:0005667 - transcription factor complex [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0016568 - chromatin modification [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : Sin3-associated polypeptide 18 protein_id : NP_033145.1

name	F630043A04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348456 CCDS:CCDS27160.1 GeneID:219114 MGI:3041235
definition	codon_start : 1 product : hypothetical protein LOC219114 protein_id : NP_941007.1

name	Mrp63 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385888 CCDS:CCDS27161.1 GeneID:67840 MGI:1915090
definition	GO_component : GO:0005761 - mitochondrial ribosome [Evidence IDA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IDA] GO_process : GO:0006412 - protein biosynthesis [Evidence IDA] codon_start : 1 product : mitochondrial ribosomal protein 63 protein_id : NP_080677.1

name	Zdhhc20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85719324 CCDS:CCDS27162.1 GeneID:75965 MGI:1923215
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : DHHC-containing protein 20 protein_id : NP_083768.4

name	Efha1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27477043 CCDS:CCDS27163.1 GeneID:68514 MGI:1915764
definition	codon_start : 1 product : Smhs2 homolog protein_id : NP_082919.1

name	Fgf9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625633 CCDS:CCDS27164.1 GeneID:14180 MGI:104723
definition	GO_function : GO:0005104 - fibroblast growth factor receptor binding [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IMP] [Evidence IDA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IEA]; GO:0007267 - cell-cell signaling [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0030324 - lung development [Evidence IDA]; GO:0008584 - male gonad development [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0050679 - positive regulation of epithelial cell proliferation [Evidence IDA]; GO:0002053 - positive regulation of mesenchymal cell proliferation [Evidence IDA]; GO:0045880 - positive regulation of smoothened signaling pathway [Evidence IDA] [Evidence IMP]; GO:0006606 - protein import into nucleus [Evidence IMP]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : glia activating factor product : fibroblast growth factor 9 protein_id : NP_038546.2

name	LOC100043554 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265764 GeneID:100043554
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480364.1

name	EG668182 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94397192 GeneID:668182 MGI:3646682
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999884.1

name	EG380907 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51921319 CCDS:CCDS27167.1 GeneID:380907 MGI:3647352
definition	codon_start : 1 product : hypothetical protein LOC380907 protein_id : NP_001004158.1

name	Rcbtb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037241 CCDS:CCDS27168.1 GeneID:71330 MGI:1918580
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 protein_id : NP_082040.1

name	LOC668140 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668140
definition	number : 1 pseudo : _no_value

name	LOC668090 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265758 GeneID:668090
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 59 ESTs, 6 Proteins product : similar to transcription elongation factor B (SIII), polypeptide 2 pseudo : _no_value transcript_id : XR_034599.1

name	LOC668160 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265626 GeneID:668160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins product : similar to High mobility group box 1 pseudo : _no_value transcript_id : XR_034000.1

name	EG668177 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94397190 GeneID:668177 MGI:3643783
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 21 Proteins product : predicted gene, EG668177 pseudo : _no_value transcript_id : XR_002153.1

name	1700129C05Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149265367 GeneID:67932 MGI:1915182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700129C05 gene transcript_id : XR_035476.1

clone name	MSMg01-157C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332M05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-312A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316M08
singlet/doublet	doublet
plural/unique	plural

clone name	B6Ng01-195P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096J08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-223A01.b	B6Ng01-223A01.g
ACC	GA037866	GA037867
length	911	934
definition	B6Ng01-223A01.b	B6Ng01-223A01.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(58,862,031 - 58,862,881)	(58,710,276 - 58,711,199)
sequence	gaattccaagaaaacacataaagacaactgaatgaattgaagaagacaat ataagttgtgaattagaagctcaataaagaggcagagttttgaaaagaga atcaagcaaattttggaaatgggaaaggataaataagtcaaaaatttaaa cctcagaagcagcctcatacatctctgcagaatctgaaggcacacttgat aaatgaacactggagaacactggaggaggagaaataactgggagcagaac atgaaagacctctggaacagcaataaaagacccatttttatggatcttgt aataagaaggctctgaggcacagactaaggacgcagaaaacctaagtgaa ataacaacagagaatttcctgtcttgggaaagatatgaatatccaggtaa aaggacatgtggagcctcaaactgaccatcaagcagagcaactatgaagt acacaaagactgaccaacctacttctgaataaacaatggaatactaaaga agtcaaaaagggaactgacaggaaaatagaaacacaatgtatcaggattt atggctttagatgctatatttaaaaaatagggagacacaaagttgggtgg atagggaagtgaaagggaatctgggtgaatgaaaataaatatgattcaaa tccattgtataaaattcacaaagaggcaatagaaatgcatttaattttaa ttggtgtcttaattactgttctattgccatgaggagacagcacagccaaa gcaatttttgtaaaagaaagcattttaattggagacttgcttatagttta gaaggttactccattattatggtgggaagtagggaggcaaggcactggag aagtagctgagagcattgttcctcaagcagcagcatagagagagagagat agatagagaga	gaattccttctagagcttgcttcttgaggtcttcccgttcctacgtggct gcagatatgaaaggctggccagaggaaaggggcgtggcatgctggactgt ctctctaccttgacccttgctctacggggcagcttgtgaacaagcaggac agcattgtgcattcgtggagcggtatagcttagcaaatggcagggtgccg ctcattgaatttaccaattcgtttttctggtggctcacttcagattcctt tgatgggagatgtttagacatgtcccattcagaaccttgaaaaaatacag ttcacaggaaggaaatggagaggtgcatttgttgaatgatcaacaaatat cagacatgctctgggaatgggtggtttttcagccgatggtttgagtgata aagccttatcttatggttcataaacacgtggtcagttttcaggaaattta gtaataattctgattaagggcatttctttggaagatcatcttagttctca gtgttcttatgtcaaagacaaggagtaagattttaatgaattgctaactt aagaccagagagcaagtgacaggtagagtaagtcagggaatctcatttca cacatatatacgtgctaggagttcatggggatgtacctcagttggtatga ttattgctagatatgtataataaaggctagatatgtacaagattcaaccc tagcactccaaataggaggtgtggtagtacctgcctgtaatcccagcata tagaaggaggctaaacagagttaatggttggcttgggttaaagtgataca ccctgttaaaaatatgggccattttgtgtgtgttgtgtgtgtgaattaaa tactattgtatttagagttagccacatgggcaaagagtgtagtagctctt cccacagatggggattttgaaaggaaatgttttc
quality values	Open. Hide. 58 33 26 20 46 58 39 13 47 62 49 62 62 62 46 42 62 54 62 62 62 62 62 47 56 51 62 62 62 62 49 62 47 59 59 45 29 38 38 46 43 45 49 62 59 59 45 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 59 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 59 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 59 62 62 54 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 47 41 62 62 62 54 58 58 58 58 58 54 54 52 58 54 58 54 54 54 58 58 58 58 54 48 58 58 58 58 58 54 58 52 58 58 58 54 54 42 54 54 52 58 58 54 54 58 58 58 58 54 58 58 54 50 58 54 58 58 58 49 42 52 58 52 54 51 50 58 51 58 53 50 53 41 58 58 58 38 58 51 41 47 48 51 58 58 46 46 32 58 58 40 33 46 49 51 31 58 53 34 18 58 49 44 36 39 53 51 58 39 52 41 33 54 58 37 35 54 51 53 52 51 58 49 50 51 28 47 39 53 53 39 53 49 53 51 41 37 46 39 34 36 29 23 33 41 49 58 50 35 32 33 41 33 58 28 31 58 39 52 45 24 25 52 41 39 45 53 49 54 39 42 47 37 39 53 42 53 41 52 37 40 47 51 38 49 47 37 36 28 35 29 31 33 37 37 32 37 47 30 52 35 52 37 35 38 34 54 54 54 53 41 36 53 54 54 49 42 53 45 34 28 28 20 19 51 47 21 25 33 37 37 35 31 47 26 32 40 34 45 53 40 32 52 29 32 31 29 24 51 53 52 32 52 47 11 51 15 24 26 31 37 29 41 23 33 25 26 32 32 31 31 30 41 30 51 45 41 33 29 24 8 15 15 30 37 30 28 32 18 24 27 19 46 23 14 31 9 22 11 21 19 33 31 18 14 30 26 30 28 27 41 12 42 18 28 24 31 25 22 22 21 22 14 6 27 11 30 31 22 9 28 23 16 12 22 11 5 25 18 27 14 18 10 9 5 15 6 13 5 13 8 11 10 10 6 9 5 6 4 6 5 9	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr14_58862031_58862881
seq2: B6Ng01-223A01.b_99_955 (reverse)

seq1  TCTCTC------TCTCTCTCTCTCTCTGCCTGCTGCTTGTGGAACAATGC  44
      ||||||      ||||||||||||| || |||||||||| ||||||||||
seq2  TCTCTCTATCTATCTCTCTCTCTCTATG-CTGCTGCTTGAGGAACAATGC  49

seq1  TCTCAGCTACTTCTCCAGTGCCTTGCCTCCCTACTTCCCACCATAATAAT  94
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTACTTCTCCAGTGCCTTGCCTCCCTACTTCCCACCATAATAAT  99

seq1  GGAGTAACCTTCTAAACTATAAGCAAGTCTCCAATT-AAATGCTTTCTTT  143
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGAGTAACCTTCTAAACTATAAGCAAGTCTCCAATTAAAATGCTTTCTTT  149

seq1  TACAAAAATTGCTTTGGCTGTGCTGTCTCCTCATGGCAATAGAACAGTAA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAATTGCTTTGGCTGTGCTGTCTCCTCATGGCAATAGAACAGTAA  199

seq1  TTAAGACACCAATTAAAATTAAATGCATTTCTATTGCCTCTTTGTGAATT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGACACCAATTAAAATTAAATGCATTTCTATTGCCTCTTTGTGAATT  249

seq1  TTATACAATGGATTTGAATCATATTTATTTTCATTCACCCAGATTCCCTT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACAATGGATTTGAATCATATTTATTTTCATTCACCCAGATTCCCTT  299

seq1  TCACTTCCCTATCCACCCAACTTTGTGTCTCCCTATTTTTTAAATATAGC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCCCTATCCACCCAACTTTGTGTCTCCCTATTTTTTAAATATAGC  349

seq1  ATCTAAAGCCATAAATCCTGATACATTGTGTTTCTATTTTCCTGTCAGTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAGCCATAAATCCTGATACATTGTGTTTCTATTTTCCTGTCAGTT  399

seq1  CCCTTTTTGACTTCTTTAGTATTCCATTGTTTATTCAGAAGTAGGTTGGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTTGACTTCTTTAGTATTCCATTGTTTATTCAGAAGTAGGTTGGT  449

seq1  CAGTCTTTGTGTACTTCATAGTTGCTCTGCTTGATGGTCAGTTTGAGGCT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTGTGTACTTCATAGTTGCTCTGCTTGATGGTCAGTTTGAGGCT  499

seq1  CCACATGTCCTTTTACCTGGATATTCATATCTTTCCCAAGACAGGAAATT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGTCCTTTTACCTGGATATTCATATCTTTCCCAAGACAGGAAATT  549

seq1  CTCTGTTGTTATTTCACTTAGGTTTTCTGCGTCCTTAGTCTGTGCCTCAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTGTTATTTCACTTAGGTTTTCTGCGTCCTTAGTCTGTGCCTCAG  599

seq1  AGCCTTCTTATTACAAGATCCATAAAAATGGGTCTTTTATTGCTGTTCCA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCTTATTACAAGATCCATAAAAATGGGTCTTTTATTGCTGTTCCA  649

seq1  GAGGTCTTTCATGTTCTGCTCCCAGTTATTTCTCCTCCTCCAGTGTTCTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTTTCATGTTCTGCTCCCAGTTATTTCTCCTCCTCCAGTGTTCTC  699

seq1  CAGTGTTCATTTATCAAGTGTGCCTTCAGATTCTGCAGAGATGTATGAGG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTCATTTATCAAGTGTGCCTTCAGATTCTGCAGAGATGTATGAGG  749

seq1  CTGCTTCTGAGGTTTAAATTTTTGACTTATTTATCCTTTCCCATTTCCAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTGAGGTTTAAATTTTTGACTTATTTATCCTTTCCCATTTCCAA  799

seq1  AATTTGCTTGATTCTCTTTTCAAAACTCTGCCTCTTTATTGAGCTTCTAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCTTGATTCTCTTTTCAAAACTCTGCCTCTTTATTGAGCTTCTAA  849

seq1  TTCACAAC  851
      ||||||||
seq2  TTCACAAC  857

seq1: chr14_58710276_58711199
seq2: B6Ng01-223A01.g_68_1000

seq1  GAATTCCTTCTAGAGCTTGCTTCTTGAGGTCTTCCCGTTCCTACGTGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTAGAGCTTGCTTCTTGAGGTCTTCCCGTTCCTACGTGGCT  50

seq1  GCAGATATGAAAGGCTGGCCAGAGGAAAGGGGCGTGGCATGCTGGACTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATATGAAAGGCTGGCCAGAGGAAAGGGGCGTGGCATGCTGGACTGT  100

seq1  CTCTCTACCTTGACCCTTGCTCTACGGGGCAGCTTGTGAACAAGCAGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTACCTTGACCCTTGCTCTACGGGGCAGCTTGTGAACAAGCAGGAC  150

seq1  AGCATTGTGCATTCGTGGAGCGGTATAGCTTAGCAAATGGCAGGGTGCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGTGCATTCGTGGAGCGGTATAGCTTAGCAAATGGCAGGGTGCCG  200

seq1  CTCATTGAATTTACCAATTCGTTTTTCTGGTGGCTCACTTCAGATTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTGAATTTACCAATTCGTTTTTCTGGTGGCTCACTTCAGATTCCTT  250

seq1  TGATGGGAGATGTTTAGACATGTCCCATTCAGAACCTTGAAAAAATACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGAGATGTTTAGACATGTCCCATTCAGAACCTTGAAAAAATACAG  300

seq1  TTCACAGGAAGGAAATGGAGAGGTGCATTTGTTGAATGATCAACAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGGAAGGAAATGGAGAGGTGCATTTGTTGAATGATCAACAAATAT  350

seq1  CAGACATGCTCTGGGAATGGGTGGTTTTTCAGCCGATGGTTTGAGTGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATGCTCTGGGAATGGGTGGTTTTTCAGCCGATGGTTTGAGTGATA  400

seq1  AAGCCTTATCTTATGGTTCATAAACACGTGGTCAGTTTTCAGGAAATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTATCTTATGGTTCATAAACACGTGGTCAGTTTTCAGGAAATTTA  450

seq1  GTAATAATTCTGATTAAGGGCATTTCTTTGGAAGATCATCTTAGTTCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAATTCTGATTAAGGGCATTTCTTTGGAAGATCATCTTAGTTCTCA  500

seq1  GTGTTCTTATGTCAAAGACAAGGAGTAAGATTTTAATGAATTGCTAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTTATGTCAAAGACAAGGAGTAAGATTTTAATGAATTGCTAACTT  550

seq1  AAGACCAGAGAGCAAGTGACAGGTAGAGTAAGTCAGGGAATCTCATTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAGAGAGCAAGTGACAGGTAGAGTAAGTCAGGGAATCTCATTTCA  600

seq1  CACATATATACGTGCTAGGAGTTCATGGGGATGTACCTCAGTTGGTATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATATACGTGCTAGGAGTTCATGGGGATGTACCTCAGTTGGTATGA  650

seq1  TTATTGCTAGATATGTATAATAAAGGCTAGATATGTACAAGATTCAACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCTAGATATGTATAATAAAGGCTAGATATGTACAAGATTCAACCC  700

seq1  TAGCACTCCAAATAGGAGGTGTGGTAGTACCTGCCTGTAATCCCAGCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTCCAAATAGGAGGTGTGGTAGTACCTGCCTGTAATCCCAGCATA  750

seq1  TAGAAGGAGGCTAAACAGAGTTAATGGTTGGCTTGGGTT-AAGTGATACA  799
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAGAAGGAGGCTAAACAGAGTTAATGGTTGGCTTGGGTTAAAGTGATACA  800

seq1  CCCTGTAAAAAATAT-GGCCATTTTGTGTGTG-TGTGTGTGTGAA-TAAA  846
      |||||| |||||||| |||||||||||||||| |||||||||||| ||||
seq2  CCCTGTTAAAAATATGGGCCATTTTGTGTGTGTTGTGTGTGTGAATTAAA  850

seq1  TACTATTGTATTTAGAGTTAGCCACAT-GGCAGAGAGTGTAGTAGCTCTT  895
      ||||||||||||||||||||||||||| |||| |||||||||||||||||
seq2  TACTATTGTATTTAGAGTTAGCCACATGGGCAAAGAGTGTAGTAGCTCTT  900

seq1  -CCACAGAT-GGGATTTTGAA--GGAATGTTTT  924
       |||||||| |||||||||||  | ||||||||
seq2  CCCACAGATGGGGATTTTGAAAGGAAATGTTTT  933

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information