BAC Information

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BAC

Clone NameB6Ng01-223I03
Chromosome14 (Build37)
Map Location 86,392,004 - 86,545,575
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668603
Downstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223I03.bB6Ng01-223I03.g
ACCGA038233GA038234
length4031,103
definitionB6Ng01-223I03.b B6Ng01-223I03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,545,167 - 86,545,575)(86,392,004 - 86,393,090)
sequence
actctgtagaccgggctggcctcgaacccagaaatctgcctgcctctatc
tcccaagtgctgggattacaggcatgcaccaccactacctagcctgattc
tttttaaaaataaattacatgcaagcaaatgaaaatcccgctcaaacttg
aatatatagtccagtgtcctgggagctgttttctatcagcttctatacaa
aaccgtatgcagttttatagctgcacttaaccaccaaccaaagagtactc
atagagagacccatcgctccagcagcatatctagcagaggacggtcttat
ctggcatcagtggaaggagaggcccttggtcctgtggaggctcgatgccc
cagcataggagaatgctatggcagtgaggcaggagtgggtgggtgggtgg
gtg
gaattcactccacggcatcctctctctctctctctctctctctctctctc
tcttgctttttttgtgaggtaacctaattcttttctcccatgttctctct
ctaatttttgcttttttattagcatatgctcatcgtacaaaatgttttta
ttatgatatgatgatatgctcagccatgtgcatcatgtatttaatcatat
taagagctaaaaactctttcttgtttttcccttcctcttcccactatcct
ccatcctcttcctttttcatctagatatgtgttcgtatgtgtgataatga
aataaaagggggttatcaatttaagagttggagacttggaaggagttgga
ggaaagggatttgagaagaggtaaaggcaggaaagggaatggtatatttt
aattaaaatgttaaaaaatatcttaatataaaatctaaattccatataga
agggaaaactgcaatactgcaatgtctttctaggtctgcattatttcact
tgacctgcttaccttctctttcattcatttttcctgtaaataatgggttt
tatttgggtattcacttgtggtaagttgatagtcactgccacacacatct
cacatgaaggtctcttgagcacagccaagattgttctcccttagccttca
gaatctctgcttgaattcttcatgggtgctggagatgaatggggataact
tttgcatgagagacgctcctccatatcccaatagtgcagctccagtatgc
catgtctgtcatcttcatgaggcgccaagaattcttagcactgctttatg
tacccctgaaaagatgatggacccacacagcagtctgagagtagcactat
tgcagataatattaaacatgctttggagtaagtgcccatgcgttcgtggt
tctgttttaaaggccttttactgaaacagttacaaagaattctgttttac
tattcttaccatttaggcctgaattagcatattgtccatgattcttggcc
tgttatcaaattttatgtccagcaaccaagtgaatccattcagggcaaat
ttttttaacttctccgggttctaaaaacaactgtaacactttccactaag
gaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86545167_86545575
seq2: B6Ng01-223I03.b_45_453 (reverse)

seq1  CACCCACCCACCCACCCACTCCTGCCTCACTGCCATAGCATTCTCCTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACCCACCCACCCACTCCTGCCTCACTGCCATAGCATTCTCCTATG  50

seq1  CTGGGGCATCGAGCCTCCACAGGACCAAGGGCCTCTCCTTCCACTGATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCATCGAGCCTCCACAGGACCAAGGGCCTCTCCTTCCACTGATGC  100

seq1  CAGATAAGACCGTCCTCTGCTAGATATGCTGCTGGAGCGATGGGTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAAGACCGTCCTCTGCTAGATATGCTGCTGGAGCGATGGGTCTCTC  150

seq1  TATGAGTACTCTTTGGTTGGTGGTTAAGTGCAGCTATAAAACTGCATACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTACTCTTTGGTTGGTGGTTAAGTGCAGCTATAAAACTGCATACG  200

seq1  GTTTTGTATAGAAGCTGATAGAAAACAGCTCCCAGGACACTGGACTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTATAGAAGCTGATAGAAAACAGCTCCCAGGACACTGGACTATAT  250

seq1  ATTCAAGTTTGAGCGGGATTTTCATTTGCTTGCATGTAATTTATTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGTTTGAGCGGGATTTTCATTTGCTTGCATGTAATTTATTTTTAA  300

seq1  AAAGAATCAGGCTAGGTAGTGGTGGTGCATGCCTGTAATCCCAGCACTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATCAGGCTAGGTAGTGGTGGTGCATGCCTGTAATCCCAGCACTTG  350

seq1  GGAGATAGAGGCAGGCAGATTTCTGGGTTCGAGGCCAGCCCGGTCTACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATAGAGGCAGGCAGATTTCTGGGTTCGAGGCCAGCCCGGTCTACAG  400

seq1  AGTGAATTC  409
      |||||||||
seq2  AGTGAATTC  409

seq1: chr14_86392004_86393090
seq2: B6Ng01-223I03.g_71_1173

seq1  GAATTCACTCCACGGCATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCCACGGCATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50

seq1  TCTTGCTTTTTTTGTGAGGTAACCTAATTCTTTTCTCCCATGTTCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTTTTTTTGTGAGGTAACCTAATTCTTTTCTCCCATGTTCTCTCT  100

seq1  CTAATTTTTGCTTTTTTATTAGCATATGCTCATCGTACAAAATGTTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTTTGCTTTTTTATTAGCATATGCTCATCGTACAAAATGTTTTTA  150

seq1  TTATGATATGATGATATGCTCAGCCATGTGCATCATGTATTTAATCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATATGATGATATGCTCAGCCATGTGCATCATGTATTTAATCATAT  200

seq1  TAAGAGCTAAAAACTCTTTCTTGTTTTTCCCTTCCTCTTCCCACTATCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGCTAAAAACTCTTTCTTGTTTTTCCCTTCCTCTTCCCACTATCCT  250

seq1  CCATCCTCTTCCTTTTTCATCTAGATATGTGTTCGTATGTGTGATAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTCTTCCTTTTTCATCTAGATATGTGTTCGTATGTGTGATAATGA  300

seq1  AATAAAAGGGGGTTATCAATTTAAGAGTTGGAGACTTGGAAGGAGTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGGGGGTTATCAATTTAAGAGTTGGAGACTTGGAAGGAGTTGGA  350

seq1  GGAAAGGGATTTGAGAAGAGGTAAAGGCAGGAAAGGGAATGGTATATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGGATTTGAGAAGAGGTAAAGGCAGGAAAGGGAATGGTATATTTT  400

seq1  AATTAAAATGTTAAAAAATATCTTAATATAAAATCTAAATTCCATATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAATGTTAAAAAATATCTTAATATAAAATCTAAATTCCATATAGA  450

seq1  AGGGAAAACTGCAATACTGCAATGTCTTTCTAGGTCTGCATTATTTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAACTGCAATACTGCAATGTCTTTCTAGGTCTGCATTATTTCACT  500

seq1  TGACCTGCTTACCTTCTCTTTCATTCATTTTTCCTGTAAATAATGGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGCTTACCTTCTCTTTCATTCATTTTTCCTGTAAATAATGGGTTT  550

seq1  TATTTGGGTATTCACTTGTGGTAAGTTGATAGTCACTGCCACACACATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGGTATTCACTTGTGGTAAGTTGATAGTCACTGCCACACACATCT  600

seq1  CACATGAAGGTCTCTTGAGCACAGCCAAGATTGTTCTCCCTTAGCCTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAAGGTCTCTTGAGCACAGCCAAGATTGTTCTCCCTTAGCCTTCA  650

seq1  GAATCTCTGCTTGAATTCTTCATGGGTGCTGGAGATGAATGGGGATAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCTGCTTGAATTCTTCATGGGTGCTGGAGATGAATGGGGATAACT  700

seq1  TTTGCATGAGAGACGCTCCTCCATATCCCAATAGTGCAGCTCCAGTATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATGAGAGACGCTCCTCCATATCCCAATAGTGCAGCTCCAGTATGC  750

seq1  CATGTCTGTCATCTTCATGAGGCGCCAAGAA-TCTTAGCACTGCTTTATG  799
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CATGTCTGTCATCTTCATGAGGCGCCAAGAATTCTTAGCACTGCTTTATG  800

seq1  TACCCCTGAAAAGATGATGGACCCACACAGCAGTCTGAGAGTAGCACTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCTGAAAAGATGATGGACCCACACAGCAGTCTGAGAGTAGCACTAT  850

seq1  TGCAGATAATATT-AACATGCTT--GGGTAAGTGCCCATGCGTTCGTGGT  896
      ||||||||||||| |||||||||  | |||||||||||||||||||||||
seq2  TGCAGATAATATTAAACATGCTTTGGAGTAAGTGCCCATGCGTTCGTGGT  900

seq1  TCTGTTTT-AAGGCCTTTTACTG-AACAGTTACAAAGAATTCTGTTTTAC  944
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  TCTGTTTTAAAGGCCTTTTACTGAAACAGTTACAAAGAATTCTGTTTTAC  950

seq1  TAATCTTACCA-TTAGGCCTGATTTAGCATATTGTCCATGATTCTT-GCC  992
      || |||||||| |||||||||| ||||||||||||||||||||||| |||
seq2  TATTCTTACCATTTAGGCCTGAATTAGCATATTGTCCATGATTCTTGGCC  1000

seq1  TG-TATTCAATTTTATGTCCAGCAACC-AGTGATCCCATTCA-GGCAAAA  1039
      || |||  ||||||||||||||||||| |||||  ||||||| |||||| 
seq2  TGTTATCAAATTTTATGTCCAGCAACCAAGTGAATCCATTCAGGGCAAAT  1050

seq1  TTTTTTAACTTCT-CTGGTTC-AGAAAC-ACTGT-ACAC-TTCCACTAAG  1084
      ||||||||||||| | ||||| | |||| ||||| |||| ||||||||||
seq2  TTTTTTAACTTCTCCGGGTTCTAAAAACAACTGTAACACTTTCCACTAAG  1100

seq1  GAA  1087
      |||
seq2  GAA  1103